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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175589

From eDNA to decisions using a multi-method approach to restoration planning in streams From eDNA to decisions using a multi-method approach to restoration planning in streams

Reintroduction efforts are increasingly used to mitigate biodiversity losses, but are frequently challenged by inadequate planning and uncertainty. High quality information about population status and threats can be used to prioritize reintroduction and restoration efforts and can transform ad hoc approaches into opportunities for improving conservation outcomes at a landscape scale. We...
Authors
Andrea J. Adams, C. Kamoroff, Daniel R. Norton, Brian J. Halstead, R. L. Grasso, Patrick M. Kleeman, C. Mengelt, K. Powelson, T. Seaborn, C.S. Goldberg

Dissolved arsenic concentrations in surface waters within the upper portions of the Klamath River Basin, Oregon and California Dissolved arsenic concentrations in surface waters within the upper portions of the Klamath River Basin, Oregon and California

Arsenic toxicity is an environmental health problem. Levels of arsenic in surface waters at some locations in the Klamath River Basin in southern Oregon and northern California can exceed the U.S. Environmental Protection Agency (EPA) standard for drinking water. There are both anthropogenic and natural sources of arsenic. The Klamath River Basin consists primarily of volcanic deposits...
Authors
Marie Noele Croteau, Brent R. Topping, Rick A. Carlson

System characterization report on the Gaofen-6 System characterization report on the Gaofen-6

Executive Summary Gaofen-6 represents a series of Chinese high-resolution Earth observation satellites. More than 12 satellites have been launched in the Gaofen series, beginning with Gaofen-1 in 2013. Satellites within the series have varying infrared, radar, and optical imaging capabilities. The primary goal for the satellites in this series is to provide near real-time observations...
Authors
Aparajithan Sampath, Jon Christopherson, Seonkyung Park, Minsu Kim, Gregory L. Stensaas, Cody Anderson

Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report

Executive Summary The purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos (Vireo bellii pusillus) at Marine Corps Base Camp Pendleton (MCBCP, or Base). Surveys for the Least Bell's Vireo were conducted at MCBCP, California, between April 1 and July 10, 2020. Core survey...
Authors
Suellen Lynn, Michelle Treadwell, Barbara E. Kus

Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report

Executive Summary Surveys for the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus) were done at Marine Corps Base Camp Pendleton (MCBCP or “Base”), California, between May 4 and July 31, 2020. All of MCBCP’s historically occupied riparian habitat (core survey area) was surveyed for flycatchers in 2020. Additionally, one-fifth of the unoccupied riparian habitat (non...
Authors
Scarlett L. Howell, Barbara E. Kus

Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii

Ocean acidification can affect the immune responses of fish, but effects on pathogen susceptibility remain uncertain. Pacific herring Clupea pallasii were reared from hatch under 3 CO2 partial pressure ( pCO2) treatments (ambient, ∼650 µatm; intermediate, ∼1500 µatm; high, ∼3000 µatm) through metamorphosis (98 d) to evaluate the effects of ocean acidification on bioenergetics and...
Authors
Christopher Murray, Jacob L. Gregg, Ashley MacKenzie, Hiruni Jayasekara, Sophie Hall, Terrie Klinger, Paul Hershberger

Using an adaptive modeling framework to identify avian influenza spillover risk at the wild-domestic interface Using an adaptive modeling framework to identify avian influenza spillover risk at the wild-domestic interface

The wild to domestic bird interface is an important nexus for emergence and transmission of highly pathogenic avian influenza (HPAI) viruses. Although the recent incursion of HPAI H5N1 Clade 2.3.4.4b into North America calls for emergency response and planning given the unprecedented scale, readily available data-driven models are lacking. Here, we provide high resolution spatial and...
Authors
Diann Prosser, Cody M. Kent, Jeffery D. Sullivan, Kelly A. Patyk, Mary-Jane McCool, Mia K. Torchetti, Kristina Lantz, Jennifer M. Mullinax

Predicting responses to climate change using a joint species, spatially dependent physiologically guided abundance model Predicting responses to climate change using a joint species, spatially dependent physiologically guided abundance model

Predicting the effects of warming temperatures on the abundance and distribution of organisms under future climate scenarios often requires extrapolating species–environment correlations to climatic conditions not currently experienced by a species, which can result in unrealistic predictions. For poikilotherms, incorporating species' thermal physiology to inform extrapolations under...
Authors
Christopher A. Custer, Joshua S. North, Erin M. Schliep, Michael R. Verhoeven, Gretchen J.A. Hansen, Tyler Wagner

Indications of preferential groundwater seepage feeding northern peatland pools Indications of preferential groundwater seepage feeding northern peatland pools

Groundwater seepage from underlying permeable glacial sedimentary structures, such as eskers, has been hypothesized to directly feed pools in northern peat bogs. These hypotheses directly contradict classical peat bog models for ombrogenous systems, wherein meteoric water is the sole water input to these systems. Variations in the underlying mineral sediment in contact with the peat...
Authors
Henry Moore, Xavier Comas, Martin A. Briggs, Andrew S. Reeve, Lee Slater

Fish beta diversity associated with hydrologic and anthropogenic disturbance gradients in contrasting stream flow regimes Fish beta diversity associated with hydrologic and anthropogenic disturbance gradients in contrasting stream flow regimes

Understanding the role of hydrologic variation in structuring aquatic communities is crucial for successful conservation and sustainable management of native freshwater biodiversity. Partitioning beta diversity into the additive components of spatial turnover and nestedness can provide insight into the forces driving variability in fish assemblages across stream flow regimes. We examined...
Authors
John Tyler Fox, Cyndy Loftin

Evaluation of extinction risk for stream fishes within an urban riverscape using population viability analysis Evaluation of extinction risk for stream fishes within an urban riverscape using population viability analysis

1. The Santa Ana River in the Los Angeles region of California demonstrates common habitat degradation symptoms that are characteristic of the urban stream syndrome. These impacts have altered the Santa Ana River community structure, with few species as impacted as the native Santa Ana sucker (sucker; Pantosteus santaanae). 2. Consequently, a recovery plan developed for sucker identified...
Authors
Brock Huntsman, Kai Palenscar, Kerwin Russell, Brett Mills, Chris Jones, William Ota, Kurt E. Anderson, Heather Dyer, Fitsum Abadi, Marissa L. Wulff

Signatures of wave erosion in Titan’s coasts Signatures of wave erosion in Titan’s coasts

The shorelines of Titan’s hydrocarbon seas trace flooded erosional landforms such as river valleys; however, it is unclear whether coastal erosion has subsequently altered these shorelines. Spacecraft observations and theoretical models suggest that wind may cause waves to form on Titan’s seas, potentially driving coastal erosion, but the observational evidence of waves is indirect, and...
Authors
Rose Elizabeth Palermo, Andrew D. Ashton, Jason M. Soderblom, Samuel P. D. Birch, Alexander G. Hayes, J. Taylor Perron
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