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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

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An amplicon genotyping panel suitable for species identification and population genetics in sauger (Sander canadensis) and walleye (Sander vitreus) An amplicon genotyping panel suitable for species identification and population genetics in sauger (Sander canadensis) and walleye (Sander vitreus)

Sauger (Sander canadensis) and walleye (Sander vitreus) are closely related North American fish species that are often managed by fishery agencies throughout their ranges. However, genotyping resources for sauger are presently limited to a small set of microsatellite loci. We evaluated whether primers in an existing walleye genotyping-in-thousands panel could amplify single nucleotide...
Authors
Jared Joseph Homola, Wesley A. Larson, Paul Albosta

Rapid population decline in McKay's Bunting, an Alaskan endemic, highlights the species’ current status relative to international standards for vulnerable species Rapid population decline in McKay's Bunting, an Alaskan endemic, highlights the species’ current status relative to international standards for vulnerable species

The McKay’s Bunting (Plectrophenax hyperboreus) is endemic to Alaska, breeds solely on the remote and uninhabited St. Matthew and Hall islands (332 km2) in the central Bering Sea, and is designated as a species of high conservation concern due to its small population size and restricted range. A previous hypothesized population estimate (~2,800—6,000 individuals) was greatly increased (...
Authors
Rachel M. Richardson, Courtney L. Amundson, James A. Johnson, Marc D. Romano, Audrey R. Taylor, Michael D. Fleming, Steven M. Matsuoka

The 2022 Chaos Canyon landslide in Colorado: Insights revealed by seismic analysis, field investigations, and remote sensing The 2022 Chaos Canyon landslide in Colorado: Insights revealed by seismic analysis, field investigations, and remote sensing

An unusual, high-alpine, rapid debris slide originating in ice-rich debris occurred on June 28, 2022, at 16:33:16 MDT at the head of Chaos Canyon, a formerly glacier-covered valley in Rocky Mountain National Park, CO, USA. In this study, we integrate eyewitness videos and seismic records of the event with meteorological data, field observations, pre- and post-event satellite imagery, and...
Authors
Kate E. Allstadt, Jeffrey A. Coe, Elaine Collins, Francis K. Rengers, Anne Mangeney, Scott M. Esser, Jana Pursley, William L. Yeck, John Bellini, Lance R. Brady

Non-native Rhizophora mangle as sinks for coastal contamination on Moloka'i, Hawai'i Non-native Rhizophora mangle as sinks for coastal contamination on Moloka'i, Hawai'i

Coastal mangrove forests provide a suite of environmental services, including sequestration of anthropogenic contamination. Yet, research lags on the environmental fate and potential human health risks of mangrove-sequestered contaminants in the context of mangrove removal for development and range shifts due to climate change. To address this, we conducted a study on Moloka'i, Hawai'i...
Authors
Geoffrey Szafranski, Elise F. Granek, Michelle L. Hladik, Mia Hackett

Examining the complex relations between climate and streamflow in the mid-atlantic region of the United States Examining the complex relations between climate and streamflow in the mid-atlantic region of the United States

We explored the complex relations between climate and streamflow in the Mid-Atlantic region of the United States. In 124 watersheds across this region, we quantified spatial and temporal variation in air temperature (AT), precipitation (P), and streamflow (Q) from 1981 through 2020. Upward directional trends in monthly values of AT, P, and Q indicated an increase of 0.27–1.9 degrees...
Authors
Karen C. Rice, Christopher A. Mason, Aaron L. Mills

Using a coupled integral projection model to investigate interspecific competition during an invasion: An application to silver carp (Hypophthalmichthys molitrix) and gizzard shad (Dorosoma cepedianum) Using a coupled integral projection model to investigate interspecific competition during an invasion: An application to silver carp (Hypophthalmichthys molitrix) and gizzard shad (Dorosoma cepedianum)

As a generalization of stage-based matrix models, integral projection models (IPMs) have been used to describe the size-based dynamics of wildlife and fisheries populations. Although some matrix models have explicitly included species interactions, few IPMs have expanded beyond single species, which limits their ability to describe the competitive dynamics of co-occuring taxa. We present...
Authors
James P Peirce, Gregory Sandland, David Schumann, Hannah Mann Thompson, Richard A. Erickson

Two-dimensional inverse energy cascade in a laboratory surf zone for varying wave directional spread Two-dimensional inverse energy cascade in a laboratory surf zone for varying wave directional spread

Surfzone eddies enhance the dispersion and transport of contaminants, bacteria, and larvae across the nearshore, altering coastal water quality and ecosystem health. During directionally spread wave conditions, vertical vortices (horizontal eddies) are injected near the ends of breaking crests. Energy associated with these eddies may be transferred to larger-scale, low-frequency...
Authors
Christine Baker, Melissa Moulton, C Chris Chickadel, Emma Nuss, Margaret L. Palmsten, Katherine L. Brodie

Applying intrinsic potential models to evaluate salmon (Oncorhynchus spp.) introduction into main-stem and tributary habitats upstream from the Skagit River Hydroelectric Project, northern Washington Applying intrinsic potential models to evaluate salmon (Oncorhynchus spp.) introduction into main-stem and tributary habitats upstream from the Skagit River Hydroelectric Project, northern Washington

We assessed habitat suitability for salmonids across selected tributaries upstream from three hydroelectric dams on the upper Skagit River in Whatcom County, northern Washington. We used NetMap, a commercial toolset within the ArcMap geographic information system (GIS), to analyze stream attributes based upon a synthetic stream channel network derived from digital elevation models. The...
Authors
Jeffrey J. Duda, Jill M. Hardiman

The context dependency of fish-habitat associations in separated karst ecoregions The context dependency of fish-habitat associations in separated karst ecoregions

Fish populations may be isolated via natural conditions in geographically separated ecoregions. Although reconnecting these populations is not a management goal, we need to understand how these populations persist across landscapes to develop meaningful conservation actions, particularly for species occupying sensitive karst ecosystems. Our study objective was to determine the...
Authors
Dusty A. Swedberg, Robert M. Mollenhauer, Shannon K. Brewer

Forage senescence and disease influence elk pregnancy across the Greater Yellowstone Ecosystem Forage senescence and disease influence elk pregnancy across the Greater Yellowstone Ecosystem

For various temperate ungulate species, recent research has highlighted the potential for spring vegetation phenology (“green-up”) to influence individual condition, with purported benefits to population productivity. However, few studies have been able to measure the benefit on vital rates directly, and fewer still have investigated the comparative influence of other phenological...
Authors
Owen R. Bidder, Thomas Connor, Juan M. Morales, Gregory J.M. Rickbeil, Jerod A. Merkle, Rebecca K. Fuda, Jared D. Rogerson, Brandon M. Scurlock, William H Edwards, Eric K. Cole, Douglas E. McWhirter, Alyson B. Courtemanch, Sarah Dewey, Matthew Kauffman, Daniel R. MacNulty, Johan T. du Toit, Daniel R. Stahler, Arthur D. Middleton

Bayesian hierarchical modeling for probabilistic estimation of tsunami amplitude from far-field earthquake sources Bayesian hierarchical modeling for probabilistic estimation of tsunami amplitude from far-field earthquake sources

Evaluation of tsunami disaster risk for a coastal region requires reliable estimation of tsunami hazard, for example, wave amplitude close to the shore. Observed tsunami data are scarce and have poor spatial coverage, and for this reason probabilistic tsunami hazard analysis (PTHA) traditionally relies on numerical simulation of “synthetic” tsunami generation and propagation toward the...
Authors
Georgios Boumis, Eric L. Geist, Danhyang Lee

Exploring the uncertainty of machine learning models and geostatistical mapping of rare earth element potential in Indiana coals, USA Exploring the uncertainty of machine learning models and geostatistical mapping of rare earth element potential in Indiana coals, USA

Rare earth elements and yttrium (REEs) have a wide range of applications in high- and low-carbon technologies. The strategic significance of REEs has grown due to their expanding applications in manufacturing industries and the constrained availability of these essential resources. This research explores the applicability of machine learning models and their uncertainty for assessing the...
Authors
Snehamoy Chatterjee, C. Ozgen Karacan, Maria Mastalerz
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