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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 174766

A detailed view of the 2020-2023 southwestern Puerto Rico seismic sequence with deep learning A detailed view of the 2020-2023 southwestern Puerto Rico seismic sequence with deep learning

The 2020–2023 southwestern Puerto Rico seismic sequence, still ongoing in 2023, is remarkable for its multiple‐fault rupture complexity and elevated aftershock productivity. We applied an automatic workflow to continuous data from 43 seismic stations in Puerto Rico to build an enhanced earthquake catalog with ∼180,000 events for the 3+ yr sequence from 28 December 2019 to 1 January 2023...
Authors
Clara Yoon, Elizabeth S. Cochran, Elizabeth A. Vanacore, Victor Huerfano, Gisela Baez-Sanchez, John D. Wilding, Jonathan D. Smith

Structural discontinuities and their control on hydrothermal systems in the Great Basin, USA Structural discontinuities and their control on hydrothermal systems in the Great Basin, USA

Faults are important controls on hydrothermal circulation worldwide. More specifically, structural discontinuities, i.e. locations where faults interact and intersect, host many hydrothermal systems. In the Great Basin, western USA, an extensive characterization effort demonstrated that hydrothermal systems are controlled by one (or more) of eight types of structural discontinuities...
Authors
Drew L. Siler

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2022 Report) Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2022 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities...
Authors
Robert Massatti, Daniel E. Winkler, Sasha C. Reed, Michael C. Duniway, Seth M. Munson, John B. Bradford

Storms and pH of dam releases affect downstream phosphorus cycling in an arid regulated river Storms and pH of dam releases affect downstream phosphorus cycling in an arid regulated river

Reservoirs often bury phosphorus (P), leading to seasonal or persistent reductions in P supply to downstream rivers. Here we ask if observed variation in the chemistry of dam release waters stimulates downstream sediment P release and biological activity in an arid, oligotrophic system, the Colorado River below Lake Powell, Arizona, USA. We use bottle incubations to simulate a range of...
Authors
Bridget Deemer, Robin H. Reibold, Anna Fatta, Jessica R. Corman, Charles Yackulic, Sasha C. Reed

White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. II. Hepatic and splenic macrophage aggregates White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. II. Hepatic and splenic macrophage aggregates

Macrophage aggregate (MA) abundance in fish is a useful general biomarker of contaminant exposures and environmental stress. Hepatic and splenic MAs were evaluated in semi-anadromous white perch Morone americana (Gmelin, 1789) from the urbanized Severn River (S) and the more rural Choptank River (C), Chesapeake Bay. Fish were collected from different sites in the annual migratory circuit...
Authors
Vicki S. Blazer, Mark A Matsche, Erin L. Pulster

Effects of hard water precipitates on early life stage brook trout Effects of hard water precipitates on early life stage brook trout

Brook trout (Salvelinus fontinalis) have been extirpated from many karst-geology streams in West Virginia; however, the causes are not fully understood. Specifically, the impact of calcareous precipitate (marl), which is common in hard-water environments, has not been evaluated as an impediment to juvenile survival. Accordingly, two lab-based studies were conducted to determine if brook...
Authors
John Davidson, Brandon J. Keplinger, Clayton D. Raines, Curtis Crouse, CHristopher Goodchild

Beyond simple trend tests: Detecting significant changes in design-flood quantiles Beyond simple trend tests: Detecting significant changes in design-flood quantiles

Changes in annual maximum flood (AMF), which are usually detected using simple trend tests (e.g., Mann-Kendall test (MKT)), are expected to change design-flood estimates. We propose an alternate framework to detect significant changes in design-flood between two periods and evaluate it for synthetically generated AMF from the Log-Pearson Type-3 (LP3) distribution due to changes in...
Authors
Chandramauli Awasthi, Stacey A. Archfield, Brian J. Reich, Arumugam Sankarasubramanian

White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. I. Biliary neoplasms and hepatic lesions White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. I. Biliary neoplasms and hepatic lesions

White perch Morone americana (Gmelin, 1789) from the Chesapeake Bay (USA) watershed have a high incidence of liver disease, including neoplasms of bile duct origin. Fish collected seasonally from spring 2019 to winter 2020 from the urban Severn River and the more rural Choptank River were evaluated for hepatic lesions. Biliary hyperplasia (64.1%), neoplasms (cholangioma and...
Authors
Vicki S. Blazer, Mark A Matsche, Erin L. Pulster

Refining capture-recapture recruitment estimation methods for Atlantic sturgeon Refining capture-recapture recruitment estimation methods for Atlantic sturgeon

The Atlantic sturgeon Acipenser oxyrinchus oxyrinchus was once of great commercial importance in many coastal rivers of the eastern USA. Over the 19th and 20th centuries, most historical stocks of Atlantic sturgeon were depleted by human activities. Estimating recruitment for the remaining populations is challenging due to sampling constraints, limited age data, and natural variability...
Authors
M.A. Baker, E.C. Ingram, D.L. Higginbotham, Brian J. Irwin, A.G. Fox

The Factors Affecting Female Black Bear Harvest Rates in Pennsylvania The Factors Affecting Female Black Bear Harvest Rates in Pennsylvania

Pennsylvania’s black bear (Ursus americanus) population increased in abundance and distribution during the latter third of the 20th century, leading to an increase in human-bear conflicts. Increases in harvest opportunities from 2002–2018 aimed to stabilize black bear population growth but did not substantially increase harvest, and annual harvest was often below the desired goal of 20%...
Authors
Brandon M. Snavely, Robert Charles Lonsinger

Evolution of a minimal cell Evolution of a minimal cell

Possessing only essential genes, a minimal cell can reveal mechanisms and processes that are critical for the persistence and stability of life1,2. Here we report on how an engineered minimal cell3,4 contends with the forces of evolution compared with the Mycoplasma mycoides non-minimal cell from which it was synthetically derived. Mutation rates were the highest among all reported...
Authors
Roy Z. Moger-Reischer, John I. Glass, Kim S. Wise, Lijie Sun, Daniela Bittencourt, Brent K. Lehmkuhl, Donald Schoolmaster, Michael Lynch, Jay T. Lennon

SARS-CoV-2 utilization of ACE2 from different bat species allows for virus entry and replication in vitro SARS-CoV-2 utilization of ACE2 from different bat species allows for virus entry and replication in vitro

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is believed to have a zoonotic origin with bats suspected as a natural host. In this work, we individually express the ACE2 of seven bat species including, little brown, great roundleaf, Pearson's horseshoe, greater horseshoe, Brazilian free-tailed, Egyptian rousette, and Chinese rufous horseshoe in DF1 cells and determine...
Authors
Kelsey Briggs, Ryan Sweeney, David S. Blehert, Erica Spackman, David L. Suarez, Darrel Kapczynski
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