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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175538

Evidence of a dietary shift by the Florida manatee (Trichechus manatus latirostris) in the Indian River Lagoon inferred from stomach content analyses Evidence of a dietary shift by the Florida manatee (Trichechus manatus latirostris) in the Indian River Lagoon inferred from stomach content analyses

Investigating the long-term fluctuations of the feeding ecology of megaherbivores such as sirenians is important, as any changes could be indicative of shifts in resource availability. The Indian River Lagoon (IRL), eastern Florida, USA, is a critical habitat for the Florida manatee (Trichechus manatus latirostris). However, the IRL has experienced a substantial decline in seagrass due...
Authors
Aarin Conrad Allen, Cathy Beck, Danielle C. Sattelberger, Jeremy J. Kiszka

Stage-specific environmental correlates of reproductive success in Boreal Toads (Anaxyrus boreas boreas) Stage-specific environmental correlates of reproductive success in Boreal Toads (Anaxyrus boreas boreas)

Compensatory recruitment can facilitate the persistence of populations experiencing high adult mortality. Because early life-stages of many taxa, including amphibians, are difficult to mark and recapture, sources of variation in survival at these stages often are unknown, which creates barriers to improving in situ recruitment rates. We leveraged count data and open N-mixture models to...
Authors
Gabriel M. Barrile, Annika W. Walters, Anna D. Chalfoun

Chenier Plain region bathymetric and topographic datasets: Methodology report Chenier Plain region bathymetric and topographic datasets: Methodology report

The goal of the Louisiana Barrier Island Comprehensive Monitoring (BICM) program is to provide long-term data on coastal Louisiana for monitoring change and assisting in coastal management. This study (carried out under Coastal Protection and Restoration Authority contract number 2000339324, BICM2—Chenier TopoBathy DEM) builds upon the previous BICM physical assessment of the Chenier...
Authors
James G. Flocks, Arnell S. Forde, Julie Bernier

How low should we alert? Quantifying intensity threshold alerting strategies for earthquake early warning in the United States How low should we alert? Quantifying intensity threshold alerting strategies for earthquake early warning in the United States

We use a suite of historical earthquakes to quantitatively determine earthquake early warning (EEW) alert threshold strategies for a range of shaking intensity targets for EEW in the U.S. West Coast. The current method for calculating alert regions for the ShakeAlert EEW System does not take into account variabilities and uncertainties in shaking distribution. As a result, if the...
Authors
Jessie Kate Saunders, Sarah E. Minson, Annemarie S. Baltay Sundstrom

Identifying factors linked with persistence of reintroduced populations: Lessons learned from 25 years of amphibian translocations Identifying factors linked with persistence of reintroduced populations: Lessons learned from 25 years of amphibian translocations

Conservation translocations are increasingly used to help recover imperiled species. However, success of establishing populations remains low, especially for amphibians. Identifying factors associated with translocation success can help increase efficiency and efficacy of recovery efforts. Since the 1990s, several captive and semi-captive facilities have produced Chiricahua Leopard Frogs...
Authors
Blake R. Hossack, Paige E. Howell, Audrey K Owens, C Cobos, Caren S. Goldberg, David L. Hall, Shaula Hedwall, Susi MacVean, Magnus McCaffery, A. Hunter McCall, C Mosley, Emily Bea Oja, James C. Rorabaugh, Brent H. Sigafus, Michael J Sredl

Documentation for the Skeletal Storage, Compaction, and Subsidence (CSUB) Package of MODFLOW 6 Documentation for the Skeletal Storage, Compaction, and Subsidence (CSUB) Package of MODFLOW 6

This report describes the skeletal storage, compaction and subsidence (CSUB) package of MODFLOW 6. The CSUB package simulates the vertical compaction of compressible sediments and land subsidence. The package simulates groundwater storage changes and elastic compaction in coarse-grained aquifer sediments. The CSUB package also simulates groundwater storage changes and elastic and...
Authors
Joseph D. Hughes, Stanley A. Leake, Devin L. Galloway, Jeremy T. White

Documentation for the MODFLOW 6 Groundwater Transport Model Documentation for the MODFLOW 6 Groundwater Transport Model

This report documents a new Groundwater Transport (GWT) Model for MODFLOW 6. The GWT Model simulates three-dimensional transport of a single chemical species in fowing groundwater based on a generalized control-volume fnite-difference approach. Although each GWT Model is only able to represent a single chemical species, multiple GWT Models may be invoked within a single MODFLOW 6...
Authors
Christian D. Langevin, Alden M. Provost, Sorab Panday, Joseph D. Hughes

Using genetic data to advance stream fish reintroduction science: A case study in brook trout Using genetic data to advance stream fish reintroduction science: A case study in brook trout

Widespread extirpation of native fish populations has led to a rise in species reintroduction efforts worldwide. Most efforts have relied on demographic data alone to guide project design and evaluate success. However, the genetic characteristics of many imperiled fish populations including low diversity, local adaptation, and hatchery introgression emphasize the importance of genetic...
Authors
Shannon L. White, Thomas C Johnson, Jacob M Rash, Barbara A. Lubinski, David C. Kazyak

Temperature optimum for marsh resilience and carbon accumulation revealed in a whole ecosystem warming experiment Temperature optimum for marsh resilience and carbon accumulation revealed in a whole ecosystem warming experiment

Coastal marshes are globally important, carbon dense ecosystems simultaneously maintained and threatened by sea-level rise. Warming temperatures may increase wetland plant productivity and organic matter accumulation, but temperature-modulated feedbacks between productivity and decomposition make it difficult to assess how wetlands and their thick, organic rich soils will respond to...
Authors
Alexander J. Smith, Genevieve L. Noyce, J. Patrick Megonigal, Glenn R. Guntenspergen, Matthew L. Kirwan

A novel application of hierarchical modelling to decouple sampling artifacts from socio-ecological effects on poaching intensity A novel application of hierarchical modelling to decouple sampling artifacts from socio-ecological effects on poaching intensity

Poaching is a global driver of wildlife population decline, including inside protected areas (PAs). Reducing poaching requires an understanding of its cryptic drivers and accurately quantifying poaching scales and intensity. There is little quantification of how poaching is affected by law enforcement intensity (e.g., ranger stations) versus economic factors (e.g., unemployment), while
Authors
Mahmood Soofi, Ali T. Qashqaei, Jan-Niklas Trei, Shirko Shokri, Javad Selyari, Benjamin Ghasemi, Poorya Sepahvand, Lukas Egli, Bagher Nezami, Navid Zamani, Gholam Hosein Yusefi, Bahram H. Kiabi, Niko Balkenhol, J. Andrew Royle, Chris R. Pavey, Steve M. Redpath, Matthias Waltert

Multi-task deep learning of daily streamflow and water temperature Multi-task deep learning of daily streamflow and water temperature

Deep learning (DL) models can accurately predict many hydrologic variables including streamflow and water temperature; however, these models have typically predicted hydrologic variables independently. This study explored the benefits of modeling two interdependent variables, daily average streamflow and daily average stream water temperature, together using multi-task DL. A multi-task...
Authors
Jeffrey Michael Sadler, Alison P. Appling, Jordan Read, Samantha K. Oliver, Xiaowei Jia, Jacob Aaron Zwart, Vipin Kumar

Assessing mineral supply concentration from different perspectives through a case study of zinc Assessing mineral supply concentration from different perspectives through a case study of zinc

Increasing demand for nonfuel mineral commodities has increased concerns regarding the reliability of their supplies. “Criticality” assessments over the past decade have attempted to capture this concern through a set of indicators, the most common of which quantifies the risk associated with market concentration by applying the Herfindahl-Hirschman Index (HHI) to the world production of...
Authors
Christine L. Thomas, Nedal T. Nassar, John H. DeYoung
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