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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175664

Microbial source tracking and evaluation of best management practices for restoring degraded beaches of Lake Michigan Microbial source tracking and evaluation of best management practices for restoring degraded beaches of Lake Michigan

Attempts to mitigate shoreline microbial contamination require a thorough understanding of pollutant sources, which often requires multiple years of data collection (e.g., point/nonpoint) and the interacting factors that influence water quality. Because restoration efforts can alter shoreline or beach morphology, revisiting source inputs is often necessary. Microbial source tracking (MST...
Authors
Meredith B. Nevers, Paul M. Buszka, Muruleedhara Byappanahalli, Travis Cole, Steven R. Corsi, P. Ryan Jackson, Julie L. Kinzelman, Cindy H Nakatsu, Mantha S. Phanikumar

Depth drives growth dynamics of dreissenid mussels in Lake Ontario Depth drives growth dynamics of dreissenid mussels in Lake Ontario

Understanding dreissenid mussel population dynamics and their impacts on lake ecosystems requires quantifying individual growth across a range of habitats. Most dreissenid mussel growth rates have been estimated in nutrient rich or nearshore environments, but mussels have continued to expand into deep, cold, low-nutrient habitats of the Great Lakes. We measured annual quagga mussel...
Authors
Ashley Elgin, Paul Glyshaw, Brian Weidel

Evaluation of post-stocking dispersal and mortality of juvenile lake trout Salvelinus namaycush in Lake Ontario using acoustic telemetry Evaluation of post-stocking dispersal and mortality of juvenile lake trout Salvelinus namaycush in Lake Ontario using acoustic telemetry

Wild reproduction by stocked lake trout Salvelinus namaycush in Lake Ontario has yet to produce a self-sustaining population, requiring a reliance on stocking. Once released, age-1 juvenile lake trout are not typically surveyed until age-2, creating a gap in knowledge of fine-scale post-release behaviors. A method to track fine-scale movements and estimate mortality of juvenile lake...
Authors
Alexander J. Gatch, Stacy L. Furgal, Dimitry Gorsky, J. Ellen Marsden, Zy F. Biesinger, Brian F. Lantry

An evaluation of fish spawning on degraded and remnant reefs in Saginaw Bay, Lake Huron An evaluation of fish spawning on degraded and remnant reefs in Saginaw Bay, Lake Huron

Saginaw Bay is a shallow, nutrient-rich embayment in Lake Huron that historically had a complex network of natural rocky reefs. These reef habitats were used as spawning and nursery areas for a variety of fish species, but decades of land-use related sedimentation caused many of these reefs to be degraded. Our study objectives were to analyze abiotic and biotic conditions on degraded and...
Authors
N Kalejs, Mitchell T. Zischke, J. Beugly, P. Collingsworth, Edward F. Roseman, R. Douglas Hunter, D. Fielder, T. Hook

Anthropogenic stressors compound climate impacts on inland lake dynamics: The case of Hamun Lakes Anthropogenic stressors compound climate impacts on inland lake dynamics: The case of Hamun Lakes

Inland lakes face unprecedented pressures from climatic and anthropogenic stresses, causing their recession and desiccation globally. Climate change is increasingly blamed for such environmental degradation, but in many regions, direct anthropogenic pressures compound, and sometimes supersede, climatic factors. This study examined a human-environmental system – the terminal Hamun Lakes...
Authors
Arash Modaresi Rad, Jason R. Kreitler, John T. Abatzoglou, Kendra Fallon, Kevin Roche, Mojitaba Sadegh

Estimating detection and occupancy of secretive marsh bird species in low and high saline marshes in southwestern Louisiana using automated recording units Estimating detection and occupancy of secretive marsh bird species in low and high saline marshes in southwestern Louisiana using automated recording units

Secretive marsh birds (SMBs) are important indicator species of coastal wetlands but are difficult to detect and monitor. In coastal Louisiana, an important stronghold for these species, climate and hydrological models predict that freshwater and intermediate marshes will expand in the next 50 years, while brackish marshes will shrink. We used a multi-species Bayesian hierarchical...
Authors
J. Hardin Waddle, Landon R. Jones, Phillip L. Vasseur, Clint W. Jeske

Heterogeneous patterns of aged organic carbon export driven by hydrologic flow paths, soil texture, fire, and thaw in discontinuous permafrost headwaters Heterogeneous patterns of aged organic carbon export driven by hydrologic flow paths, soil texture, fire, and thaw in discontinuous permafrost headwaters

Climate change is thawing and potentially mobilizing vast quantities of organic carbon (OC) previously stored for millennia in permafrost soils of northern circumpolar landscapes. Climate-driven increases in fire and thermokarst may play a key role in OC mobilization by thawing permafrost and promoting transport of OC. Yet, the extent of OC mobilization and mechanisms controlling...
Authors
Joshua C. Koch, Matthew Bogard, David Butman, Kerri Finlay, Brian A. Ebel, Jason James, Sarah Ellen Johnston, M. Torre Jorgenson, Neal Pastick, Rob Spencer, Rob Striegl, Michelle A. Walvoord, Kimberly Wickland

A comparison of eDNA and visual survey methods for detection of longnose darter Percina nasuta in Missouri A comparison of eDNA and visual survey methods for detection of longnose darter Percina nasuta in Missouri

The longnose darter Percina nasuta is a rare and cryptic fish that recently disappeared from much of its historic range. We developed and used an environmental DNA (eDNA) assay for longnose darter paired with visual surveys to better determine the species’ range and compare detection probability between sampling approaches in an occupancy modeling framework. We detected longnose darter...
Authors
Jacob Thomas Westhoff, Leah K. Berkman, Katy E. Klymus, Nathan Thompson, Cathy A. Richter

Errors in aerial survey count data: Identifying pitfalls and solutions Errors in aerial survey count data: Identifying pitfalls and solutions

Accurate estimates of animal abundance are essential for guiding effective management, and poor survey data can produce misleading inferences. Aerial surveys are an efficient survey platform, capable of collecting wildlife data across large spatial extents in short timeframes. However, these surveys can yield unreliable data if not carefully executed. Despite a long history of aerial...
Authors
Kayla L. Davis, Emily D Silverman, Allison Sussman, R. Randy Wilson, Elise F. Zipkin

Estimating the aboveground biomass and carbon stocks of tall shrubs in a prerestoration degraded salt marsh Estimating the aboveground biomass and carbon stocks of tall shrubs in a prerestoration degraded salt marsh

Wetlands play a vital role in Earth's carbon cycle and provide important ecosystem services. Their ability to perform their roles can be compromised by human activities that destroy or impair their functioning. The restoration of degraded wetlands may allow carbon cycle functioning, as well as other services, to be recovered. Predicting the potential outcomes from any restoration project...
Authors
Jacqualyn Fouse, Meagan J. Eagle, Kevin D. Kroeger, Timothy P. Smith

Comparative virulence of spring viremia of carp virus (SVCV) genotypes in two koi varieties Comparative virulence of spring viremia of carp virus (SVCV) genotypes in two koi varieties

Spring viremia of carp virus (SVCV), is a lethal freshwater pathogen of cyprinid fish, and Cyprinus carpio koi is a primary host species. The virus was initially described in the 1960s after outbreaks occurred in Europe, but a global expansion of SVCV has been ongoing since the late 1990s. Genetic typing of SVCV isolates separates them into 4 genotypes that are correlated with geographic...
Authors
Eveline J. Emmenegger, Emma K. Bueren, Peng Jia, Noble Hendrix, Hong Liu

Inherit the kingdom or storm the castle? Breeding strategies in a social carnivore Inherit the kingdom or storm the castle? Breeding strategies in a social carnivore

Breeding opportunities are inherently limited for animals that live and breed in groups. Turnover in breeding positions can have marked effects on groups of cooperative breeders, particularly social carnivores. We generally know little about how breeding vacancies are filled in social carnivores and what factors might influence an individual's ability to successfully fill a vacancy. I...
Authors
David Edward Ausband
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