Helen Sofaer, PhD
Helen Sofaer is a Research Ecologist at the Pacific Island Ecosystems Research Center in Hawai‘i.
Science and Products
INHABIT: A web tool for invasive plant management across the contiguous United States
INHABIT is a desktop-optimized web application and decision support tool with mapped and tabular summaries of habitat suitability models for over two hundred fifty terrestrial invasive plant species of management concern across the contiguous United States. It is the product of a scientist-practitioner partnership and is designed to facilitate enhanced invasive species management actions...
Assessing the Proliferation, Connectivity, and Consequences of Invasive Fine Fuels on the Sagebrush Biome
Invasive annual grasses can replace native vegetation and alter fire behavior, impacting a range of habitats and species. A team of researchers from the U.S. Geological Survey, Colorado State University, the Bureau of Land Management, and the U.S. Fish and Wildlife Service are working to identify factors that influence changes in the distribution and abundance of invasive annual grasses (IAGs)...
Developing Methods to Manage an Invasive Ant at Midway Atoll
Project Overview A new Trichomyrmex ant was first observed at Midway Atoll in 2019 and has caused management concerns due to its impacts on wildlife, endangered plants, and infrastructure since its arrival. Researchers supported by this Pacific Islands CASC project will map the range of the ant and test the effectiveness of using pesticidal baits to eradicate this destructive and...
Climate matching with the climatchR R package
Climate matching is a method for understanding species distributions and ranges and may be used as part of horizon scanning. Horizon scanning is the process of examining potential risk of invasion of new invasive species. Preventing new invasive species invasion requires less time and resources than attempting to control and remove established invasive species. Horizon scanning allows resource...
Proof of concept airborne eDNA testing to detect invasive species in shipping containers
Shipping containers that are transported by water vessels traveling between islands and the mainland or other islands can act as a vector for invasive species that are accidentally transported with the cargo. If the vessel carries a lot of cargo, or cargo has areas for different species to hide, inspections can be difficult, time consuming, and expensive, or in the case of non-agricultural...
Modeling First Records to Guide Invasive Species Biosurveillance in Hawai‘i
Early detection of invasive species can enable their successful eradication. With climate change and dynamic patterns of global trade, it is difficult to predict which new invasive species will next get introduced and where introduction and establishment will occur. We are analyzing where non-native species have first established in Hawai‘i to develop mapped predictions of the relative risk of new...
Climatic and Ecological Scenarios to Guide Development of a Spatial Resist-Accept-Direct Portfolio at Nāpuʻu, Hawaiʻi
Climate change and invasive species are transforming ecosystems. The Resist-Accept-Direct (RAD) framework organizes management objectives into those that seek to Resist change and maintain historical ecological communities, those that Accept some or all aspects of ecological transformation, and those that Direct an ecological community to a preferred state. We are evaluating risks posed by climate...
Invader in Hawai‘i, the Queensland Longhorn Beetle
The wood-boring beetle Acalolepta aesthetica, informally known as the Queensland longhorn beetle, has emerged as a problematic invasive species on the Island of Hawai‘i. Our research established that the preferred host of A. aesthetica is the kukui ( Aleurites moluccanus; also called candlenut), the state tree of the Hawaiian Islands, and other preferred hosts include valued agricultural and...
Developing a macroecological understanding of invasive plant impacts based on abundance and trait data
Understanding invasive plant impacts can provide insight into community assembly and inform the development of successful management strategies. The impacts of invasive species depend on how they alter patterns of abundance within recipient communities and on the characteristics of the invaders and the affected species. Research has suggested that common species may be more impacted by...
Crafting Ecological Scenarios to Implement the Resist-Accept-Direct (RAD) Framework
As climate change progresses, profound environmental changes are becoming a widespread concern. A new management paradigm is developing to address this concern with a framework that encourages strategic decisions to resist, accept, or direct ecological trajectories. Effective use of the Resist-Accept-Direct (RAD) framework requires the scientific community to describe the range of...
Webinar: Projecting Climate Change Impacts on Wetland-Dependent Birds in the Prairie Pothole Region
View this webinar to learn how scientists are projecting the impacts of climate change on birds in the Prairie Pothole Region.
The Role of Climate in Shaping Invasive Plant Abundance across Different Spatial Locations
Invasive plants are a major land management problem in the Western U.S. Cheatgrass (Bromus tectorum) is the most prominent and problematic invader in cold deserts, with negative effects on rangeland fire patterns, wildlife habitats, and forage/vegetation. Red brome (B. madritensis) is an invader in the Mojave Desert, and can similarly introduce a new fire patterns to sensitive warm...
Filter Total Items: 25
Hawai‘i Volcanoes National Park, Barcoding of Ambrosia Beetles and Wood-boring Lepidoptera Larva, 2021-2023 Hawai‘i Volcanoes National Park, Barcoding of Ambrosia Beetles and Wood-boring Lepidoptera Larva, 2021-2023
Ambrosia beetles (Coleoptera: Curculionidae) have been implicated in the spread of Ceratocystis fungi that cause rapid ‘ōhiʻa death (ROD), a deadly fungal disease threatening the keystone Hawaiian tree ʻōhiʻa lehua (Metrosideros polymorpha). Research has investigated the role that ambrosia beetles play in the spread of the disease, including studies within Hawaiʻi Volcanoes National Park...
Island of Hawai'i, Host preferences of Acalolepta aesthetica 2020-2023 Island of Hawai'i, Host preferences of Acalolepta aesthetica 2020-2023
Acalolepta aesthetica (Coleoptera: Cerambycidae) is a beetle species whose larvae develop within branches and stems of host plants and can harm or kill host trees. Since this species was detected on the Island of Hawai'i in 2009, it has been documented to have a wide host breadth but its host preferences and its potential to use native plant species as hosts have not been formally...
Hawaiʻi Volcanoes National Park Effects of Felling and Tarping Trees on ROD Viability and Ambrosia Beetle Activity 2022-2023 Hawaiʻi Volcanoes National Park Effects of Felling and Tarping Trees on ROD Viability and Ambrosia Beetle Activity 2022-2023
Felling and tarping is a common management strategy for ʻōhiʻa lehua trees (Metrosideros polymorpha) infected with rapid ʻōhiʻa death (ROD) caused by Ceratocystis lukuohia and Ceratocystis huliohia fungal pathogens and spread via ambrosia beetles (Coleoptera: Curculionidae). In order to understand how tarping may decrease fungal viability or the spread of viable beetle frass, this study...
Island of Hawai'i Ambrosia Beetle Trapping Data and Locations of Suspected Ceratocystis-positive ʻōhiʻa at Two Sites, 2021-2022 Island of Hawai'i Ambrosia Beetle Trapping Data and Locations of Suspected Ceratocystis-positive ʻōhiʻa at Two Sites, 2021-2022
This data release includes data and metadata documenting 1) ambrosia beetle (Coleoptera: Curculionidae) species caught in multi-panel traps within ʻōhiʻa lehua (Metrosideros polymorpha) dominated forests in Hawaiʻi Volcanoes National Park as well as results from culturing Ceratocystis lukuohia or Ceratocystis huliohia, the fungi that cause rapid ʻōhiʻa death (ROD), from these traps, 2)...
Horizon Scan for Vertebrates in Trade Horizon Scan for Vertebrates in Trade
This is a dataset summarizing filtering criteria and rapid risk assessments for ~25,000 species undertaken during a data-driven horizon scan of imported fish, amphibians, reptiles, birds, and mammals. The files represented in this dataset are the following: 1) 'species_filtering_metadata_table.xlsx' is the tabular summary of all intake list species names and the reason for inclusion...
Conterminous U.S. data used for modeling non-native vascular plant first records 1780-2022 Conterminous U.S. data used for modeling non-native vascular plant first records 1780-2022
This dataset was used for modeling the spatial distribution of first records of non-native plants in the conterminous U.S. The input dataset (alldata_input_frdm.csv) contains 4,763 rows of data, representing 1,538 counties in the contiguous U.S., 25 decades, and 3,389 first records of invasive terrestrial plant species (Williams et al., 2024) found in the US-RIIS list (Simpson et al...
Community level traits of invaded plant communities in the United States Community level traits of invaded plant communities in the United States
Data were compiled from large trait databases for functional above and belowground traits (e.g. specific leaf area, specific root length, etc) of plants in communities across the United States along with information about the degree to which invasive species dominate those communities.
Rates of change in invasive annual grass cover to inform potential management opportunities across the sagebrush biome of the western United States Rates of change in invasive annual grass cover to inform potential management opportunities across the sagebrush biome of the western United States
We used Rangeland Condition Monitoring Assessment and Projection (RCMAP) maps of annual herbaceous fractional components (mostly invasive annual grasses) to calculate mean rate of change in invasive annual grass cover over five-year time periods (ratesOfChange1987_2021.zip). We also created a map that identifies zones of the sagebrush biome that could be prioritized for different...
First and Second Record of US-RIIS Vascular Plant Species in Contiguous United States First and Second Record of US-RIIS Vascular Plant Species in Contiguous United States
This is a dataset containing the first and second record of georeferenced observations of introduced and invasive vascular plant species in the contiguous United States (CONUS). Non-native plant species were identified using the United States Register of Introduced and Invasive Species (US-RIIS) list. After identifying a list of plants non-native to CONUS, we obtained presence data from...
Management summary table for INHABIT species potential distribution across the contiguous United States: additional management units Management summary table for INHABIT species potential distribution across the contiguous United States: additional management units
We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...
Hawaiʻi Ambrosia Beetle Trap Lures and Repellents 2020-2021 (ver. 2.0, October 2024) Hawaiʻi Ambrosia Beetle Trap Lures and Repellents 2020-2021 (ver. 2.0, October 2024)
This data release includes data and metadata containing (1) ambrosia beetle (Coleoptera: Curculionidae) trapping data using two different lures at Waiākea Forest Reserve and ʻŌlaʻa Forest of Hawai'i Volcanoes National Park, (2) ambrosia beetle trapping data using paired lures and repellents from two trials conducted at Waiākea Forest Reserve, and (3) the localities of all traps used in...
INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023) INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023)
We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...
Filter Total Items: 43
Non-native bird populations respond differently to their environment and exhibit shifts in ecological niche limits across continents Non-native bird populations respond differently to their environment and exhibit shifts in ecological niche limits across continents
Aim The degree to which species' niches remain stable over space and time–the niche conservatism hypothesis–is critical for predicting species' responses to environmental change. Tests of this hypothesis typically focus on changes in niche centroids and boundaries. An outstanding question is whether species' environmental associations differ within the interior of their niche space–that...
Authors
Kristin P. Davis, Helen Sofaer, Henrik Smith, Henning Heldbjerg, Anna Gamero, Ainārs Auniņš, Lluís Brotons, Tomasz Chodkiewicz, Daniel Eskildsen, Benoît Fontaine, John Kålås, Primož Kmecl, Petras Kurlavičius, Aleksi Lehikoinen, Åke Lindström, Ingar Øien, Jiří Reif, Nicolas Strebel, Tibor Szép, Chris van Turnhout, Thomas Vikstrøm, Liba Pejchar
Why are non-native plants successful? Consistently fast economic traits and novel origin jointly explain abundance across US ecoregions Why are non-native plants successful? Consistently fast economic traits and novel origin jointly explain abundance across US ecoregions
Are non-native plants abundant because they are non-native, and have advantages over native plants, or because they possess ‘fast’ resource strategies, and have advantages in disturbed environments? This question is central to invasion biology but remains unanswered.We quantified the relative importance of resource strategy and biogeographic origin in 69 441 plots across the conterminous...
Authors
Dana Blumenthal, Jeffrey Diez, Ian Pearse, Helen Sofaer, Cascade Sorte, Dave Barnett, Evelyn Beaury, Bethany Bradley, Jeff Corbin, Jeffrey Dukes, Regan Early, Ines Ibanez, Daniel Laughlin, Lais Petri, Montserrat Vila
Drought and deluge— Opportunities for climate-change adaptation in US national parks Drought and deluge— Opportunities for climate-change adaptation in US national parks
In a changing climate, resource management depends on anticipating changes and considering uncertainties. To facilitate effective decision making on public lands, we regionally summarized the magnitude and uncertainty of projected change in management-relevant climate variables for 332 national park units across the contiguous US. Temperature, frequency of extreme precipitation events...
Authors
Meagan Oldfather, Amber N. Runyon, Kyra Clark-Wolf, Wynne Moss, Imtiaz Rangwala, Anthony Ciocco, Aparna Bamzai-Dodson, Helen Sofaer, Brian Miller
Abundance of ohiʻa-associated ambrosia beetles in two sites with rapid ohiʻa death outbreaks Abundance of ohiʻa-associated ambrosia beetles in two sites with rapid ohiʻa death outbreaks
ʻŌhiʻa lehua (Metrosideros polymorpha Gaudich.) is the dominant tree in native Hawaiian forests but is threatened by two pathogenic fungi (Ceratocystis spp.) which cause Rapid ʻŌhiʻa Death (ROD). Understanding the spread of ROD is vital to informing prevention and management strategies. Ambrosia beetles (Coleoptera: Curculionidae: Scolytinae) contribute to the spread of disease by...
Authors
Helen Sofaer, Sophia Smith, Robert W. Peck, Ellen Dunkle, Jorden Zarders, Naiʻa Odachi, Ryan Perroy
Ecological scenarios: Embracing ecological uncertainty in an era of global change Ecological scenarios: Embracing ecological uncertainty in an era of global change
Scenarios, or plausible characterizations of the future, can help natural resource stewards plan and act under uncertainty. Current methods for developing scenarios for climate change adaptation planning are often focused on exploring uncertainties in future climate, but new approaches are needed to better represent uncertainties in ecological responses. Scenarios that characterize how...
Authors
Kyra Clark-Wolf, Wynne Moss, Brian Miller, Imtiaz Rangwala, Helen Sofaer, Gregor Schuurman, Dawn Magness, Amy Symstad, Jonathan Coop, Dominique M. Bachelet, Joseph Barsugli, A. Ciocco, Shelley Crausbay, Tyler Hoecker, Jena Lewinsohn, Meagan Oldfather, Orien Richmond, Renee Rondeau, Amber Runyon, Robin Russell, Jennifer Wilkening
Clarifying the role of the resist–accept–direct framework in supporting resource management planning processes Clarifying the role of the resist–accept–direct framework in supporting resource management planning processes
No abstract available.
Authors
Gregor Schuurman, Wylie Carr, Cat Hawkins Hoffman, David Lawrence, Brian Miller, Erik Beever, Jean Brennan, Katherine Clifford, Scott Covington, Shelley Crausbay, Amanda Cravens, John Gross, Linh Hoang, Stephen Jackson, Abraham J. Miller-Rushing, Wendy Morrison, Elizabeth A. Nelson, Robin O'Malley, Jay Peterson, Mark T. Porath, Karen Prentice, Joel Reynolds, Suresh Sethi, Helen Sofaer, Jennifer Wilkening
A quantitative classification of the geography of non-native flora in the United States A quantitative classification of the geography of non-native flora in the United States
Aim Non-native plants have the potential to harm ecosystems. Harm is classically related to their distribution and abundance, but this geographical information is often unknown. Here, we assess geographical commonness as a potential indicator of invasive status for non-native flora in the United States. Geographical commonness could inform invasion risk assessments across species and...
Authors
Bethany A. Bradley, Annette Evans, Helen Sofaer, Montserrat Vilà, David Barnett, Evelyn Beaury, Dana Blumenthal, Jeffrey Corbin, Jeffrey Dukes, Regan Early, Ines Ibanez, Ian Pearse, Lais Petri, Cascade Sorte
Using plant invasions to compare occurrence- and abundance-based calculations of biotic homogenisation: Are results complementary or contradictory? Using plant invasions to compare occurrence- and abundance-based calculations of biotic homogenisation: Are results complementary or contradictory?
Aim Beta diversity quantifies the similarity of ecological assemblages. Its increase, known as biotic homogenisation, can be a consequence of biological invasions. However, species occurrence (presence/absence) and abundance-based analyses can produce contradictory assessments of the magnitude and direction of changes in beta diversity. Previous work indicates these contradictions should...
Authors
D.M. Buonaiuto, David Barnett, Dana Blumenthal, Andrea N. Nebhut, Ian Pearse, Helen Sofaer, Cascade Sorte, Jeffrey D. Corbin, Regan Early, Magda Garbowski, Ines Ibanez, Daniel Laughlin, Laís Petri, Montserrat Vilà, Bethany A. Bradley
Vertebrates in trade that pose high invasion risk to the United States Vertebrates in trade that pose high invasion risk to the United States
The United States imports thousands of live vertebrate species annually as part of legal trade. Escapes and releases from captivity are major pathways of invasion, however, the risk posed by the thousands of imported vertebrate species has not been systematically assessed. We conducted a horizon scan that used a data-driven climate match to filter a list of nearly 15,000 taxa drawn from...
Authors
Wesley Daniel, Helen Sofaer, Catherine Jarnevich, Richard Erickson, Brett DeGregorio, Peder Scott Engelstad, Jonathan A. Freedman, Susan Canavan, Emily M. Dean, Michael J Adams, Charmayne L. Anderson, Mindy Barnett, Marybeth Brey, Kyle J. Brumm, Matthew S. Bunting, Emily Caffrey, Laura Cardador, Jacoby Carter, Phillip Cassey, Duane Chapman, Natalie Claunch, Timothy D. Counihan, Kristin P. Davis, Anant Deshwal, Andrew K. Douglas, Corey Dunn, Chase Ehlo, Katie Everett, Jason M. Gleditsch, Andrew Grosse, Zoey Hendrickson, Steven Hess, Jeffrey Hill, Nick Holmes, Ana Longo, Julie Lockwood, Doran M. Mason, Ashley McDonald, Matthew Neilson, Kristen Reaver, Robert Reed, Caleb Roberts, Jane Rogosch, Christina Romagosa, James Russell, Annie Simpson, Scott Smith, Jinelle Sperry, Quenton Tuckett, Kurt VerCauteren, J. Hardin Waddle, Christian Wanamaker, John Willson, Arden Williams, Deah Lieurance
First records distribution models to guide biosurveillance for non-native species First records distribution models to guide biosurveillance for non-native species
Quickly locating new populations of non-native species can reduce the ecological and economic costs of species invasions. However, the difficulty of predicting which new non-native species will establish, and where, has limited active post-border biosurveillance efforts. Because pathways of introduction underlie spatial patterns of establishment risk, an intuitive approach is to search...
Authors
Helen Sofaer, Demetra Williams, Catherine Jarnevich, Keana Shadwell, Caroline Kittle, Ian Pearse, Lucas Fortini, Kelsey C. Brock
Rates of change in invasive annual grass cover to inform management actions in sagebrush ecosystems Rates of change in invasive annual grass cover to inform management actions in sagebrush ecosystems
No abstract available.
Authors
Morgan Roche, Michele R. Crist, Cameron Aldridge, Helen Sofaer, Catherine Jarnevich, Julie A. Heinrichs
Observed and potential range shifts of native and non-native species with climate change Observed and potential range shifts of native and non-native species with climate change
There is broad concern that the range shifts of global flora and fauna will not keep up with climate change, increasing the likelihood of population declines and extinctions. Many populations of nonnative species already have advantages over native species, including widespread human-aided dispersal and release from natural enemies. But do nonnative species also have an advantage with...
Authors
Bethany A. Bradley, Evelyn Beaury, Belinda Gallardo, Inés Ibáñez, Catherine Jarnevich, Toni Morelli, Helen Sofaer, Cascade Sorte, Montserrat Vilà
High-throughput calculations of climatch scores High-throughput calculations of climatch scores
Matching climate envelopes allows people to examine how potential invasive species may match habitats. This repository contains code for using the climatchR package for high-throughput calculations of climatch scores for species using GBIF data. Climatch is based upon the climatch algorithm as implemented through the climatchR package.
climatchR: An implementation of Climatch in R climatchR: An implementation of Climatch in R
Matching climate envelopes of allows people to examine how potential invasive species may match habitats. The Australian government created Climatch to do allow for these comparisons. However, this webpage does not allow for readily scripting climate matching. Hence, the authors created climatchR, an R package (R Core Team 2020) implementing the climatch method in R. This was created to...
Science and Products
INHABIT: A web tool for invasive plant management across the contiguous United States
INHABIT is a desktop-optimized web application and decision support tool with mapped and tabular summaries of habitat suitability models for over two hundred fifty terrestrial invasive plant species of management concern across the contiguous United States. It is the product of a scientist-practitioner partnership and is designed to facilitate enhanced invasive species management actions...
Assessing the Proliferation, Connectivity, and Consequences of Invasive Fine Fuels on the Sagebrush Biome
Invasive annual grasses can replace native vegetation and alter fire behavior, impacting a range of habitats and species. A team of researchers from the U.S. Geological Survey, Colorado State University, the Bureau of Land Management, and the U.S. Fish and Wildlife Service are working to identify factors that influence changes in the distribution and abundance of invasive annual grasses (IAGs)...
Developing Methods to Manage an Invasive Ant at Midway Atoll
Project Overview A new Trichomyrmex ant was first observed at Midway Atoll in 2019 and has caused management concerns due to its impacts on wildlife, endangered plants, and infrastructure since its arrival. Researchers supported by this Pacific Islands CASC project will map the range of the ant and test the effectiveness of using pesticidal baits to eradicate this destructive and...
Climate matching with the climatchR R package
Climate matching is a method for understanding species distributions and ranges and may be used as part of horizon scanning. Horizon scanning is the process of examining potential risk of invasion of new invasive species. Preventing new invasive species invasion requires less time and resources than attempting to control and remove established invasive species. Horizon scanning allows resource...
Proof of concept airborne eDNA testing to detect invasive species in shipping containers
Shipping containers that are transported by water vessels traveling between islands and the mainland or other islands can act as a vector for invasive species that are accidentally transported with the cargo. If the vessel carries a lot of cargo, or cargo has areas for different species to hide, inspections can be difficult, time consuming, and expensive, or in the case of non-agricultural...
Modeling First Records to Guide Invasive Species Biosurveillance in Hawai‘i
Early detection of invasive species can enable their successful eradication. With climate change and dynamic patterns of global trade, it is difficult to predict which new invasive species will next get introduced and where introduction and establishment will occur. We are analyzing where non-native species have first established in Hawai‘i to develop mapped predictions of the relative risk of new...
Climatic and Ecological Scenarios to Guide Development of a Spatial Resist-Accept-Direct Portfolio at Nāpuʻu, Hawaiʻi
Climate change and invasive species are transforming ecosystems. The Resist-Accept-Direct (RAD) framework organizes management objectives into those that seek to Resist change and maintain historical ecological communities, those that Accept some or all aspects of ecological transformation, and those that Direct an ecological community to a preferred state. We are evaluating risks posed by climate...
Invader in Hawai‘i, the Queensland Longhorn Beetle
The wood-boring beetle Acalolepta aesthetica, informally known as the Queensland longhorn beetle, has emerged as a problematic invasive species on the Island of Hawai‘i. Our research established that the preferred host of A. aesthetica is the kukui ( Aleurites moluccanus; also called candlenut), the state tree of the Hawaiian Islands, and other preferred hosts include valued agricultural and...
Developing a macroecological understanding of invasive plant impacts based on abundance and trait data
Understanding invasive plant impacts can provide insight into community assembly and inform the development of successful management strategies. The impacts of invasive species depend on how they alter patterns of abundance within recipient communities and on the characteristics of the invaders and the affected species. Research has suggested that common species may be more impacted by...
Crafting Ecological Scenarios to Implement the Resist-Accept-Direct (RAD) Framework
As climate change progresses, profound environmental changes are becoming a widespread concern. A new management paradigm is developing to address this concern with a framework that encourages strategic decisions to resist, accept, or direct ecological trajectories. Effective use of the Resist-Accept-Direct (RAD) framework requires the scientific community to describe the range of...
Webinar: Projecting Climate Change Impacts on Wetland-Dependent Birds in the Prairie Pothole Region
View this webinar to learn how scientists are projecting the impacts of climate change on birds in the Prairie Pothole Region.
The Role of Climate in Shaping Invasive Plant Abundance across Different Spatial Locations
Invasive plants are a major land management problem in the Western U.S. Cheatgrass (Bromus tectorum) is the most prominent and problematic invader in cold deserts, with negative effects on rangeland fire patterns, wildlife habitats, and forage/vegetation. Red brome (B. madritensis) is an invader in the Mojave Desert, and can similarly introduce a new fire patterns to sensitive warm...
Filter Total Items: 25
Hawai‘i Volcanoes National Park, Barcoding of Ambrosia Beetles and Wood-boring Lepidoptera Larva, 2021-2023 Hawai‘i Volcanoes National Park, Barcoding of Ambrosia Beetles and Wood-boring Lepidoptera Larva, 2021-2023
Ambrosia beetles (Coleoptera: Curculionidae) have been implicated in the spread of Ceratocystis fungi that cause rapid ‘ōhiʻa death (ROD), a deadly fungal disease threatening the keystone Hawaiian tree ʻōhiʻa lehua (Metrosideros polymorpha). Research has investigated the role that ambrosia beetles play in the spread of the disease, including studies within Hawaiʻi Volcanoes National Park...
Island of Hawai'i, Host preferences of Acalolepta aesthetica 2020-2023 Island of Hawai'i, Host preferences of Acalolepta aesthetica 2020-2023
Acalolepta aesthetica (Coleoptera: Cerambycidae) is a beetle species whose larvae develop within branches and stems of host plants and can harm or kill host trees. Since this species was detected on the Island of Hawai'i in 2009, it has been documented to have a wide host breadth but its host preferences and its potential to use native plant species as hosts have not been formally...
Hawaiʻi Volcanoes National Park Effects of Felling and Tarping Trees on ROD Viability and Ambrosia Beetle Activity 2022-2023 Hawaiʻi Volcanoes National Park Effects of Felling and Tarping Trees on ROD Viability and Ambrosia Beetle Activity 2022-2023
Felling and tarping is a common management strategy for ʻōhiʻa lehua trees (Metrosideros polymorpha) infected with rapid ʻōhiʻa death (ROD) caused by Ceratocystis lukuohia and Ceratocystis huliohia fungal pathogens and spread via ambrosia beetles (Coleoptera: Curculionidae). In order to understand how tarping may decrease fungal viability or the spread of viable beetle frass, this study...
Island of Hawai'i Ambrosia Beetle Trapping Data and Locations of Suspected Ceratocystis-positive ʻōhiʻa at Two Sites, 2021-2022 Island of Hawai'i Ambrosia Beetle Trapping Data and Locations of Suspected Ceratocystis-positive ʻōhiʻa at Two Sites, 2021-2022
This data release includes data and metadata documenting 1) ambrosia beetle (Coleoptera: Curculionidae) species caught in multi-panel traps within ʻōhiʻa lehua (Metrosideros polymorpha) dominated forests in Hawaiʻi Volcanoes National Park as well as results from culturing Ceratocystis lukuohia or Ceratocystis huliohia, the fungi that cause rapid ʻōhiʻa death (ROD), from these traps, 2)...
Horizon Scan for Vertebrates in Trade Horizon Scan for Vertebrates in Trade
This is a dataset summarizing filtering criteria and rapid risk assessments for ~25,000 species undertaken during a data-driven horizon scan of imported fish, amphibians, reptiles, birds, and mammals. The files represented in this dataset are the following: 1) 'species_filtering_metadata_table.xlsx' is the tabular summary of all intake list species names and the reason for inclusion...
Conterminous U.S. data used for modeling non-native vascular plant first records 1780-2022 Conterminous U.S. data used for modeling non-native vascular plant first records 1780-2022
This dataset was used for modeling the spatial distribution of first records of non-native plants in the conterminous U.S. The input dataset (alldata_input_frdm.csv) contains 4,763 rows of data, representing 1,538 counties in the contiguous U.S., 25 decades, and 3,389 first records of invasive terrestrial plant species (Williams et al., 2024) found in the US-RIIS list (Simpson et al...
Community level traits of invaded plant communities in the United States Community level traits of invaded plant communities in the United States
Data were compiled from large trait databases for functional above and belowground traits (e.g. specific leaf area, specific root length, etc) of plants in communities across the United States along with information about the degree to which invasive species dominate those communities.
Rates of change in invasive annual grass cover to inform potential management opportunities across the sagebrush biome of the western United States Rates of change in invasive annual grass cover to inform potential management opportunities across the sagebrush biome of the western United States
We used Rangeland Condition Monitoring Assessment and Projection (RCMAP) maps of annual herbaceous fractional components (mostly invasive annual grasses) to calculate mean rate of change in invasive annual grass cover over five-year time periods (ratesOfChange1987_2021.zip). We also created a map that identifies zones of the sagebrush biome that could be prioritized for different...
First and Second Record of US-RIIS Vascular Plant Species in Contiguous United States First and Second Record of US-RIIS Vascular Plant Species in Contiguous United States
This is a dataset containing the first and second record of georeferenced observations of introduced and invasive vascular plant species in the contiguous United States (CONUS). Non-native plant species were identified using the United States Register of Introduced and Invasive Species (US-RIIS) list. After identifying a list of plants non-native to CONUS, we obtained presence data from...
Management summary table for INHABIT species potential distribution across the contiguous United States: additional management units Management summary table for INHABIT species potential distribution across the contiguous United States: additional management units
We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...
Hawaiʻi Ambrosia Beetle Trap Lures and Repellents 2020-2021 (ver. 2.0, October 2024) Hawaiʻi Ambrosia Beetle Trap Lures and Repellents 2020-2021 (ver. 2.0, October 2024)
This data release includes data and metadata containing (1) ambrosia beetle (Coleoptera: Curculionidae) trapping data using two different lures at Waiākea Forest Reserve and ʻŌlaʻa Forest of Hawai'i Volcanoes National Park, (2) ambrosia beetle trapping data using paired lures and repellents from two trials conducted at Waiākea Forest Reserve, and (3) the localities of all traps used in...
INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023) INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023)
We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...
Filter Total Items: 43
Non-native bird populations respond differently to their environment and exhibit shifts in ecological niche limits across continents Non-native bird populations respond differently to their environment and exhibit shifts in ecological niche limits across continents
Aim The degree to which species' niches remain stable over space and time–the niche conservatism hypothesis–is critical for predicting species' responses to environmental change. Tests of this hypothesis typically focus on changes in niche centroids and boundaries. An outstanding question is whether species' environmental associations differ within the interior of their niche space–that...
Authors
Kristin P. Davis, Helen Sofaer, Henrik Smith, Henning Heldbjerg, Anna Gamero, Ainārs Auniņš, Lluís Brotons, Tomasz Chodkiewicz, Daniel Eskildsen, Benoît Fontaine, John Kålås, Primož Kmecl, Petras Kurlavičius, Aleksi Lehikoinen, Åke Lindström, Ingar Øien, Jiří Reif, Nicolas Strebel, Tibor Szép, Chris van Turnhout, Thomas Vikstrøm, Liba Pejchar
Why are non-native plants successful? Consistently fast economic traits and novel origin jointly explain abundance across US ecoregions Why are non-native plants successful? Consistently fast economic traits and novel origin jointly explain abundance across US ecoregions
Are non-native plants abundant because they are non-native, and have advantages over native plants, or because they possess ‘fast’ resource strategies, and have advantages in disturbed environments? This question is central to invasion biology but remains unanswered.We quantified the relative importance of resource strategy and biogeographic origin in 69 441 plots across the conterminous...
Authors
Dana Blumenthal, Jeffrey Diez, Ian Pearse, Helen Sofaer, Cascade Sorte, Dave Barnett, Evelyn Beaury, Bethany Bradley, Jeff Corbin, Jeffrey Dukes, Regan Early, Ines Ibanez, Daniel Laughlin, Lais Petri, Montserrat Vila
Drought and deluge— Opportunities for climate-change adaptation in US national parks Drought and deluge— Opportunities for climate-change adaptation in US national parks
In a changing climate, resource management depends on anticipating changes and considering uncertainties. To facilitate effective decision making on public lands, we regionally summarized the magnitude and uncertainty of projected change in management-relevant climate variables for 332 national park units across the contiguous US. Temperature, frequency of extreme precipitation events...
Authors
Meagan Oldfather, Amber N. Runyon, Kyra Clark-Wolf, Wynne Moss, Imtiaz Rangwala, Anthony Ciocco, Aparna Bamzai-Dodson, Helen Sofaer, Brian Miller
Abundance of ohiʻa-associated ambrosia beetles in two sites with rapid ohiʻa death outbreaks Abundance of ohiʻa-associated ambrosia beetles in two sites with rapid ohiʻa death outbreaks
ʻŌhiʻa lehua (Metrosideros polymorpha Gaudich.) is the dominant tree in native Hawaiian forests but is threatened by two pathogenic fungi (Ceratocystis spp.) which cause Rapid ʻŌhiʻa Death (ROD). Understanding the spread of ROD is vital to informing prevention and management strategies. Ambrosia beetles (Coleoptera: Curculionidae: Scolytinae) contribute to the spread of disease by...
Authors
Helen Sofaer, Sophia Smith, Robert W. Peck, Ellen Dunkle, Jorden Zarders, Naiʻa Odachi, Ryan Perroy
Ecological scenarios: Embracing ecological uncertainty in an era of global change Ecological scenarios: Embracing ecological uncertainty in an era of global change
Scenarios, or plausible characterizations of the future, can help natural resource stewards plan and act under uncertainty. Current methods for developing scenarios for climate change adaptation planning are often focused on exploring uncertainties in future climate, but new approaches are needed to better represent uncertainties in ecological responses. Scenarios that characterize how...
Authors
Kyra Clark-Wolf, Wynne Moss, Brian Miller, Imtiaz Rangwala, Helen Sofaer, Gregor Schuurman, Dawn Magness, Amy Symstad, Jonathan Coop, Dominique M. Bachelet, Joseph Barsugli, A. Ciocco, Shelley Crausbay, Tyler Hoecker, Jena Lewinsohn, Meagan Oldfather, Orien Richmond, Renee Rondeau, Amber Runyon, Robin Russell, Jennifer Wilkening
Clarifying the role of the resist–accept–direct framework in supporting resource management planning processes Clarifying the role of the resist–accept–direct framework in supporting resource management planning processes
No abstract available.
Authors
Gregor Schuurman, Wylie Carr, Cat Hawkins Hoffman, David Lawrence, Brian Miller, Erik Beever, Jean Brennan, Katherine Clifford, Scott Covington, Shelley Crausbay, Amanda Cravens, John Gross, Linh Hoang, Stephen Jackson, Abraham J. Miller-Rushing, Wendy Morrison, Elizabeth A. Nelson, Robin O'Malley, Jay Peterson, Mark T. Porath, Karen Prentice, Joel Reynolds, Suresh Sethi, Helen Sofaer, Jennifer Wilkening
A quantitative classification of the geography of non-native flora in the United States A quantitative classification of the geography of non-native flora in the United States
Aim Non-native plants have the potential to harm ecosystems. Harm is classically related to their distribution and abundance, but this geographical information is often unknown. Here, we assess geographical commonness as a potential indicator of invasive status for non-native flora in the United States. Geographical commonness could inform invasion risk assessments across species and...
Authors
Bethany A. Bradley, Annette Evans, Helen Sofaer, Montserrat Vilà, David Barnett, Evelyn Beaury, Dana Blumenthal, Jeffrey Corbin, Jeffrey Dukes, Regan Early, Ines Ibanez, Ian Pearse, Lais Petri, Cascade Sorte
Using plant invasions to compare occurrence- and abundance-based calculations of biotic homogenisation: Are results complementary or contradictory? Using plant invasions to compare occurrence- and abundance-based calculations of biotic homogenisation: Are results complementary or contradictory?
Aim Beta diversity quantifies the similarity of ecological assemblages. Its increase, known as biotic homogenisation, can be a consequence of biological invasions. However, species occurrence (presence/absence) and abundance-based analyses can produce contradictory assessments of the magnitude and direction of changes in beta diversity. Previous work indicates these contradictions should...
Authors
D.M. Buonaiuto, David Barnett, Dana Blumenthal, Andrea N. Nebhut, Ian Pearse, Helen Sofaer, Cascade Sorte, Jeffrey D. Corbin, Regan Early, Magda Garbowski, Ines Ibanez, Daniel Laughlin, Laís Petri, Montserrat Vilà, Bethany A. Bradley
Vertebrates in trade that pose high invasion risk to the United States Vertebrates in trade that pose high invasion risk to the United States
The United States imports thousands of live vertebrate species annually as part of legal trade. Escapes and releases from captivity are major pathways of invasion, however, the risk posed by the thousands of imported vertebrate species has not been systematically assessed. We conducted a horizon scan that used a data-driven climate match to filter a list of nearly 15,000 taxa drawn from...
Authors
Wesley Daniel, Helen Sofaer, Catherine Jarnevich, Richard Erickson, Brett DeGregorio, Peder Scott Engelstad, Jonathan A. Freedman, Susan Canavan, Emily M. Dean, Michael J Adams, Charmayne L. Anderson, Mindy Barnett, Marybeth Brey, Kyle J. Brumm, Matthew S. Bunting, Emily Caffrey, Laura Cardador, Jacoby Carter, Phillip Cassey, Duane Chapman, Natalie Claunch, Timothy D. Counihan, Kristin P. Davis, Anant Deshwal, Andrew K. Douglas, Corey Dunn, Chase Ehlo, Katie Everett, Jason M. Gleditsch, Andrew Grosse, Zoey Hendrickson, Steven Hess, Jeffrey Hill, Nick Holmes, Ana Longo, Julie Lockwood, Doran M. Mason, Ashley McDonald, Matthew Neilson, Kristen Reaver, Robert Reed, Caleb Roberts, Jane Rogosch, Christina Romagosa, James Russell, Annie Simpson, Scott Smith, Jinelle Sperry, Quenton Tuckett, Kurt VerCauteren, J. Hardin Waddle, Christian Wanamaker, John Willson, Arden Williams, Deah Lieurance
First records distribution models to guide biosurveillance for non-native species First records distribution models to guide biosurveillance for non-native species
Quickly locating new populations of non-native species can reduce the ecological and economic costs of species invasions. However, the difficulty of predicting which new non-native species will establish, and where, has limited active post-border biosurveillance efforts. Because pathways of introduction underlie spatial patterns of establishment risk, an intuitive approach is to search...
Authors
Helen Sofaer, Demetra Williams, Catherine Jarnevich, Keana Shadwell, Caroline Kittle, Ian Pearse, Lucas Fortini, Kelsey C. Brock
Rates of change in invasive annual grass cover to inform management actions in sagebrush ecosystems Rates of change in invasive annual grass cover to inform management actions in sagebrush ecosystems
No abstract available.
Authors
Morgan Roche, Michele R. Crist, Cameron Aldridge, Helen Sofaer, Catherine Jarnevich, Julie A. Heinrichs
Observed and potential range shifts of native and non-native species with climate change Observed and potential range shifts of native and non-native species with climate change
There is broad concern that the range shifts of global flora and fauna will not keep up with climate change, increasing the likelihood of population declines and extinctions. Many populations of nonnative species already have advantages over native species, including widespread human-aided dispersal and release from natural enemies. But do nonnative species also have an advantage with...
Authors
Bethany A. Bradley, Evelyn Beaury, Belinda Gallardo, Inés Ibáñez, Catherine Jarnevich, Toni Morelli, Helen Sofaer, Cascade Sorte, Montserrat Vilà
High-throughput calculations of climatch scores High-throughput calculations of climatch scores
Matching climate envelopes allows people to examine how potential invasive species may match habitats. This repository contains code for using the climatchR package for high-throughput calculations of climatch scores for species using GBIF data. Climatch is based upon the climatch algorithm as implemented through the climatchR package.
climatchR: An implementation of Climatch in R climatchR: An implementation of Climatch in R
Matching climate envelopes of allows people to examine how potential invasive species may match habitats. The Australian government created Climatch to do allow for these comparisons. However, this webpage does not allow for readily scripting climate matching. Hence, the authors created climatchR, an R package (R Core Team 2020) implementing the climatch method in R. This was created to...