Herpetological Research Team (FRESC)
Science Center Objects
The Herpetological Research Team focuses on issues related to conservation and management of amphibians and other aquatic and semi-aquatic species. Among our current studies are effects of invasive species, disease, and land use change on the dynamics of amphibian communities to inform conservation and management decision making.
Many of our projects are supported by the USGS Amphibian Research and Monitoring Initiative (ARMI). ARMI works with Department of Interior (DOI) and other federal and state agencies to respond to information gaps that are critical to the implementation of effective conservation and management strategies for amphibian communities. ARMI’s work includes research on the status and threats of native species, development and evaluation of quantitative and field methods, and monitoring designs to address conservation and management information needs at multiple spatial and temporal scales.
Principal Investigator
Michael Adams - Supervisory Research Ecologist
Federal Staff
Brome McCreary - Wildlife Biologist
Christopher Pearl - Wildlife Biologist
Jenn Rowe - Wildlife Biologist
Affiliate
Adam Duarte - Research Ecologist at Oregon State University
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Date published: November 6, 2017Status: ActiveAquatic Invasive Species
Aquatic invasive species, like bullfrogs, stocked fish, crayfish, and reed canarygrass can affect aquatic systems in a variety of ways and have been linked to declines in some amphibians.
Contacts: Michael J Adams -
Date published: November 6, 2017Status: ActiveDeclining Amphibians
Amphibian populations world-wide are declining for reasons that include disease, habitat loss, and invasive species. Our research addresses these threats as part of the Amphibian Research and Monitoring Initiative (ARMI), a nationwide, federally funded program. We work with resource managers to provide information that improves understanding of status of amphibians and the implications of...
Contacts: Michael J Adams -
Date published: November 13, 2017Status: ActiveAquatic Habitats and Communities
The Pacific Northwest includes a patchwork of public lands managed by numerous state and federal agencies. Our research informs and supports these agencies as they conserve and manage native amphibian species, including pre- and post-treatment assessment, decision support, long-term monitoring, population translocation, and habitat restoration.
Contacts: Michael J Adams -
Date published: November 13, 2017Status: ActiveOregon Spotted Frog
The Oregon spotted frog (Rana pretiosa) is a medium-sized anuran native to the northwestern United States. Body coloration ranges from brown or tan to brick red, usually overlaid with dark, ragged spots. Oregon spotted frogs can be distinguished from other native species by their relatively short hind legs, orange or red wash of color on underside of abdomen and legs, and upturned...
Contacts: Michael J Adams -
Date published: August 22, 2019Status: ActiveQuantitative and Other Methods
Applying quantitative methods to evaluate ecological hypotheses for wild animal populations is inherently challenging due to the complexity of ecological systems and the sampling process that is used to monitor them.
Contacts: Michael J Adams -
Date published: August 22, 2019Status: ActiveDisease
Disease is a major threat facing amphibian and reptile populations around the world. Our research addresses interactions between pathogens, the environment, and hosts to better understand ways to prevent the spread of disease.
Contacts: Michael J Adams
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Year Published: 2017Early action to address an emerging wildlife disease
A deadly fungal pathogen, Batrachochytrium salamandrivorans (Bsal) that affects amphibian skin was discovered during a die-off of European fire salamanders (Salamandra salamandra) in 2014. This pathogen has the potential to worsen already severe worldwide amphibian declines. Bsal is a close relative to another fungal disease known as...
Adams, M.J.; Harris, M. Camille; Grear, Daniel A.Attribution: Forest and Rangeland Ecosystem Science Center (FRESC), National Wildlife Health Center, Ecosystems, Fish & Wildlife DiseaseView CitationAdams, M.J., Harris, M.C., and Grear, D.A., 2017, Early action to address an emerging wildlife disease: U.S. Geological Survey Fact Sheet 2017-3013, 2 p., https://doi.org/10.3133/fs20173013.
Effect of amphibian chytrid fungus (Batrachochytrium dendrobatidis) on apparent survival of frogs and toads in the western USA
Despite increasing interest in determining the population-level effects of emerging infectious diseases on wildlife, estimating effects of disease on survival rates remains difficult. Even for a well-studied disease such as amphibian chytridiomycosis (caused by the fungus Batrachochytrium dendrobatidis [Bd]), there are few estimates of...
Russell, Robin E.; Halstead, Brian J.; Mosher, Brittany; Muths, Erin L.; Adams, Michael J.; Campbell Grant, Evan H.; Fisher, Robert N.; Kleeman, Patrick M.; Backlin, Adam R.; Pearl, Christopher; Honeycutt, R. Ken; Hossack, Blake R. Conservation research across scales in a national program: How to be relevant to local management yet general at the same time
Successfully addressing complex conservation problems requires attention to pattern and process at multiple spatial scales. This is challenging from a logistical and organizational perspective. In response to indications of worldwide declines in amphibian populations, the Amphibian Research and Monitoring Initiative (ARMI) of the United States...
Adams, Michael J.; Muths, Erin L. Compounding effects of climate change reduce population viability of a montane amphibian
Anthropogenic climate change presents challenges and opportunities to the growth, reproduction, and survival of individuals throughout their life cycles. Demographic compensation among life‐history stages has the potential to buffer populations from decline, but alternatively, compounding negative effects can lead to accelerated population decline...
Kissel, Amanda M.; Palen, Wendy J.; Ryan, Maureen E.; Adams, Michael J.
Batrachochytrium salamandriovrans (Bsal) in Appalachia—Using scenario building to proactively prepare for a wildlife disease outbreak caused by an invasive amphibian chytrid fungus
Batrachochytrium salamandrivorans (Bsal), a pathogenic chytrid fungus, is nonnative to the United States and poses a disease threat to vulnerable amphibian hosts. The Bsal fungus may lead to increases in threatened, endangered, and sensitive status listings at State, Tribal, and Federal levels, resulting in financial costs associated with...
Hopkins, M.C.; Adams, M.J.; Super, P.E.; Olson, D.H.; Hickman, C.R.; English, P.; Sprague, L.; Maska, I.B. ; Pennaz, A.B.; Ludwig, K.A. Identifying management-relevant research priorities for responding to disease-associated amphibian declines
A research priority can be defined as a knowledge gap that, if resolved, identifies the optimal course of conservation action. We (a group of geographically distributed and multidisciplinary research scientists) used tools from nominal group theory and decision analysis to collaboratively identify and prioritize information...
Campbell Grant, Evan H.; Adams, M.J.; Fisher, Robert N.; Grear, Daniel A.; Halstead, Brian J.; Hossack, Blake R.; Muths, Erin L.; Richgels, Katherine L. D.; Russell, Robin E.; Smalling, Kelly L.; Waddle, J. Hardin; Walls, Susan C.; White, C. LeAnn Quantifying climate sensitivity and climate-driven change in North American amphibian communities
Changing climate will impact species’ ranges only when environmental variability directly impacts the demography of local populations. However, measurement of demographic responses to climate change has largely been limited to single species and locations. Here we show that amphibian communities are responsive to climatic variability, using >...
Miller, David A.W.; Campbell Grant, Evan H.; Muths, Erin L.; Amburgey, Staci M.; Adams, M.J.; Joseph, Maxwell B.; Waddle, J. Hardin; Johnson, Pieter T.J.; Ryan, Maureen E.; Schmidt, Benedikt R.; Calhoun, Daniel L.; Davis, Courtney L.; Fisher, Robert N.; Green, David M.; Hossack, Blake R.; Rittenhouse, Tracy A.G.; Walls, Susan C.; Bailey, Larissa L.; Cruickshank, Sam S.; Fellers, Gary M.; Gorman, Thomas A.; Haas, Carola A.; Hughson, Ward; Pilliod, David S.; Price, Steven J.; Ray, Andrew M.; Sadinski, Walter; Saenz, Daniel; Barichivich, William J.; Brand, Adrianne B,; Brehme, Cheryl S.; Dagit, Rosi; Delaney, Katy S.; Glorioso, Brad M.; Kats, Lee B.; Kleeman, Patrick M.; Pearl, Christopher; Rochester, Carlton J.; Riley, Seth P. D.; Roth, Mark F.; Sigafus, Brent Late-season movement and habitat use by Oregon spotted frogs (Rana pretiosa) in Oregon, USA
Many amphibians use multiple habitats across seasons. Information on seasonal habitat use, movement between seasonal habitat types, and habitats that may be particularly valuable is important to conservation and management. We used radio-telemetry to study late-season movement and habitat use by Oregon Spotted Frog (Rana pretiosa) at nine sites...
Pearl, Christopher; Mccreary, Brome; Rowe, Jennifer; Adams, M.J. Regional variation in drivers of connectivity for two frog species (Rana pretiosa and R. luteiventris) from the U.S. Pacific Northwest
Comparative landscape genetics has uncovered high levels of variability in which landscape factors affect connectivity among species and regions. However, the relative importance of species traits versus environmental variation for predicting landscape patterns of connectivity is unresolved. We provide evidence from a landscape genetics study of...
Robertson, Jeanne M.; Murphy, Melanie A.; Pearl, Christopher; Adams, M.J.; Paez-Vacas, Monica I.; Haig, Susan M.; Pilliod, David S.; Storfer, Andrew; Funk, W. Chris Fitting N-mixture models to count data with unmodeled heterogeneity: Bias, diagnostics, and alternative approaches
Monitoring animal populations is central to wildlife and fisheries management, and the use of N-mixture models toward these efforts has markedly increased in recent years. Nevertheless, relatively little work has evaluated estimator performance when basic assumptions are violated. Moreover, diagnostics to identify when bias in parameter estimates...
Duarte, Adam; Adams, M.J.; Peterson, James Effect of cattle exclosures on Columbia Spotted Frog abundance
Livestock grazing is an important land use in the western USA and can have positive or negative effects on amphibians. Columbia Spotted Frog (Rana luteiventris) often use ponds that provide water for cattle. We conducted a long-term manipulative study on US Forest Service land in northeastern Oregon to determine the effects of full and partial...
Adams, M.J.; Pearl, Christopher; Chambert, Thierry; Mccreary, Brome; Galvan, Stephanie; Rowe, Jennifer Inference of timber harvest effects on survival of stream amphibians is complicated by movement
The effects of contemporary logging practices on headwater stream amphibians have received considerable study but with conflicting or ambiguous results. We posit that focusing inference on demographic rates of aquatic life stages may help refine understanding, as aquatic and terrestrial impacts may differ considerably. We investigated in-stream...
Chelgren, Nathan; Adams, M.J. A new parameterization for integrated population models to document amphibian reintroductions
Managers are increasingly implementing reintroduction programs as part of a global effort to alleviate amphibian declines. Given uncertainty in factors affecting populations and a need to make recurring decisions to achieve objectives, adaptive management is a useful component of these efforts. A major impediment to the estimation of demographic...
Duarte, Adam; Pearl, Christopher; Adams, M.J.; Peterson, James-
Date published: September 21, 2017
Oregon Spotted Frog (Rana pretiosa) Monitoring at Jack Creek 2015-2016
This dataset contains information from mark-recapture and egg mass surveys conducted by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts aggregated by date, location, life stage, and sex, as well as data on environmental conditions at the time each survey.
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Date published: January 20, 2016Invasive Amphibian Fungus Could Threaten US Salamander Populations
A deadly fungus causing population crashes in wild European salamanders could emerge in the United States and threaten already declining amphibians here, according to a report released today by the U.S. Geological Survey.
Attribution: Core Science Systems, National Wildlife Health Center