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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42700

Speaking the same language: Can the Sustainable Development Goals translate the needs of inland fisheries into irrigation decisions? Speaking the same language: Can the Sustainable Development Goals translate the needs of inland fisheries into irrigation decisions?

Irrigated agriculture and inland fisheries both make important contributions to food security, nutrition, livelihoods, and well-being. Typically, in modern irrigation systems, these components operate independently. Some practices, commonly associated with water use and intensification of crop production, can be in direct conflict with and have adverse impacts on fisheries. Food security
Authors
Abigail Lynch, Lee J. Baumgartner, Craig A. Boys, John Conallin, Ian. G. Cowx, C. Max Finlayson, Paul A. Franklin, Zeb Hogan, John D. Koehn, Matthrew P. McCartney, Gordon C. O’Brien, Kaviphone Phouthavong, Luiz G. M. Silva, Chann Aun Tob, John Valbo-Jorgensen, An Vi Vu, Louise Whiting, Arif Wibowo, Phil Duncan

Global change-driven use of onshore habitat impacts polar bear faecal microbiota Global change-driven use of onshore habitat impacts polar bear faecal microbiota

The gut microbiota plays a critical role in host health, yet remains poorly studied in wild species. Polar bears (Ursus maritimus), key indicators of Arctic ecosystem health and environmental change, are currently affected by rapid shifts in habitat that may alter gut homeostasis. Declining sea ice has led to a divide in the southern Beaufort Sea polar bear subpopulation such that an...
Authors
Sophie Watson, Heidi Hauffe, Matthew Bull, Todd C. Atwood, Melissa McKinney, Massimo Pindo, Sarah Perkins

De facto reuse and disinfection by-products in drinking water systems in the Shenandoah River watershed De facto reuse and disinfection by-products in drinking water systems in the Shenandoah River watershed

De facto reuse is increasingly being studied among the variety of stressors that are relevant to drinking water systems that obtain their source water from surface waters. De facto reuse may influence the levels and types of precursors relevant to formation of disinfection by-products (DBPs) in surface water systems. DBPs such as trihalomethanes (THMs) and haloacetic acids (HAAs) have...
Authors
Richard J Weisman, Larry B. Barber, Jennifer Rapp, Celso M Ferreira

A mosaic of estuarine habitat types with prey resources from multiple environmental strata supports a diversified foraging portfolio for juvenile Chinook salmon A mosaic of estuarine habitat types with prey resources from multiple environmental strata supports a diversified foraging portfolio for juvenile Chinook salmon

Estuaries provide vital nursery habitat for threatened Chinook salmon (Oncorhynchus tshawytscha) by promoting an ecological portfolio effect, whereby multiple habitat types and environmental strata maximize foraging opportunities for out-migrating salmon by varying the abundance and composition of prey through space and time. To study this portfolio effect, we evaluated the foraging...
Authors
Isa Woo, Melanie J. Davis, Christopher S. Ellings, Sayre Hodgson, John Y. Takekawa, Glynnis Nakai, Susan E.W. De La Cruz

Passive restoration of vegetation and biological soil crusts following 80 years of exclusion from grazing across the Great Basin Passive restoration of vegetation and biological soil crusts following 80 years of exclusion from grazing across the Great Basin

Restoration targets for biological soil crusts are largely unknown. We surveyed seven 80‐year‐old grazing exclosures across northern Nevada for biocrusts to quantify reference conditions at relatively undisturbed sites. Exclosures were associated with the following plant communities: Wyoming big sagebrush, black sagebrush, and areas co‐dominated by winterfat and Wyoming big sagebrush...
Authors
Lea A. Condon, Nicole Pietrasiak, Roger Rosentreter, David A. Pyke

Quantifying trends and uncertainty in prehistoric forest composition Quantifying trends and uncertainty in prehistoric forest composition

Forest ecosystems in eastern North America were in flux over the last several thousand years, well before Euro-American land clearance and the 20th-century onset of anthropogenic climate change. However, the magnitude and uncertainty of prehistoric vegetation change have been difficult to quantify because of the multiple ecological, dispersal, and sedimentary processes that govern the...
Authors
Andria Dawson, Christopher J. Paciorek, Simon Goring, Stephen Jackson, Jason S. McLachlan, John W. Williams

Artificial intelligence and avian influenza: Using machine learning to enhance active surveillance for avian influenza viruses Artificial intelligence and avian influenza: Using machine learning to enhance active surveillance for avian influenza viruses

Influenza A viruses are one of the most significant viral groups globally with substantial impacts on human, domestic animal and wildlife health. Wild birds are the natural reservoirs for these viruses, and active surveillance within wild bird populations provides critical information about viral evolution forming the basis of risk assessments and countermeasure development...
Authors
Daniel P. Walsh, Ting Fung Ma, S. Ip, Jun Zhu

Indo-West Pacific species of Trachinotus with spots on their sides as adults, with description of a new species endemic to the Marquesas Islands (Teleostei: Carangidae) Indo-West Pacific species of Trachinotus with spots on their sides as adults, with description of a new species endemic to the Marquesas Islands (Teleostei: Carangidae)

Diagnoses, comparisons, photographs and distribution maps are given for three previously described Indo-West Pacific species of Trachinotus that develop spots on their sides as adults. A new species, Trachinotus macrospilus, is described from the Marquesas Islands where it is endemic and the only species of the genus present. It differs from the other spotted Indo-West Pacific species...
Authors
William F. Smith-Vaniz, Stephen J. Walsh

Zooplankton dynamics in a Great Lakes connecting channel: Exploring the seasonal composition within the St. Clair-Detroit River System Zooplankton dynamics in a Great Lakes connecting channel: Exploring the seasonal composition within the St. Clair-Detroit River System

The connecting channels linking the Laurentian Great Lakes provide important migration routes, spawning grounds, and nursery habitat for fish, but their role as conduits between lakes for zooplankton is less understood. To address this knowledge gap in the St. Clair–Detroit River System (SCDRS), a comprehensive survey of crustacean zooplankton was performed in both riverine and...
Authors
Kevin (Contractor) Keeler, Taaja Tucker, Christine M Mayer, William W. Taylor, Edward F. Roseman

From Manitoba to Texas: A study of the population genetic structure of bur oak (Quercus macrocarpa) From Manitoba to Texas: A study of the population genetic structure of bur oak (Quercus macrocarpa)

In the taxonomic world, the oaks are known as a rambunctious group, notorious for hybridizing. In this report, we present preliminary information to address the question of how much hybridization is occurring between bur oak and white oaks with which it is sympatric, through rangewide sampling of bur oak and five co-occurring species: white oak (Q. alba L.), swamp white oak (Q. bicolor...
Authors
Mira Garner, Kasey Pham, Alan T. Whittemore, Jeannine Cavender-Bares, Paul F. Gugger, Paul Manos, Ian S. Pearse, Andrew Hipp

White-tailed deer movements and space use on Fire Island: A four-year radio-telemetry study 2015-2016 post-Hurricane Sandy assessment White-tailed deer movements and space use on Fire Island: A four-year radio-telemetry study 2015-2016 post-Hurricane Sandy assessment

Hurricane Sandy provided a unique opportunity to better understand the movements of Fire Island’s dense white-tailed deer (Odocoileus virginianus borealis) herds. White-tailed deer inhabit all areas of Fire Island National Seashore and their high densities negatively affect native vegetation in several areas of the island, especially as disturbed areas attempt to recover after a...
Authors
Chellby R. Kilheffer, Jordan Raphael, Lindsay Ries, H. Brian Underwood

What nutrient sources support anomalous growth and the recent sargassum mass stranding on Caribbean beaches? A review What nutrient sources support anomalous growth and the recent sargassum mass stranding on Caribbean beaches? A review

Since 2011, tropical beaches from Africa to Brazil, Central America, and the Caribbean have been inundated by tons of sargassum seaweed from a new equatorial source of pelagic sargassum in the Atlantic. In recent years the extraordinary accumulations of sargassum make this a nuisance algal bloom for tropical coasts. In 2018 satellite data indicated floating mats of sargassum that...
Authors
Candace Oviatt, Kristin Huizenga, Caroline Rogers, Jeff Miller
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