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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42871

Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration

In the face of accelerating climate change, advancing understanding of how extreme climatic events influence estuarine salinities can help to inform resource management. Extreme salinities driven by droughts, hurricanes, floods, and freshwater flow alterations can lead to ecological transformations in estuarine ecosystems. Here, we applied the Coastal Salinity Index (CSI; Conrads and...
Authors
Laura Feher, Michael Osland, Christopher Swarzenski

Incorporating metapopulation dynamics to inform invasive species management: Evaluating bighead and silver carp control strategies in the Illinois River Incorporating metapopulation dynamics to inform invasive species management: Evaluating bighead and silver carp control strategies in the Illinois River

1. Invasive species management can benefit from predictive models that incorporate spatially explicit demographics and dispersal to guide resource allocation decisions. 2. We used invasive bigheaded carps (Hypophthalmichthys spp.) in the Illinois River, USA as a case study to create a spatially explicit model to evaluate the allocation of future management efforts. Specifically, we...
Authors
Jahn Kallis, Richard A. Erickson, David P. Coulter, Alison A. Coulter, Marybeth K. Brey, Matt Catalano, John M. Dettmers, James E. Garvey, Kevin Irons, Elizabeth A. Marschall, Kenneth A Rose, Mark L. Wildhaber, David C. Glover

Tree-ring derived avalanche frequency and climate associations in a high-latitude, maritime climate Tree-ring derived avalanche frequency and climate associations in a high-latitude, maritime climate

Snow avalanches are a natural hazard in mountainous areas worldwide with severe impacts that include fatalities, damage to infrastructure, disruption to commerce, and landscape disturbance. Understanding long-term avalanche frequency patterns, and associated climate and weather influences, improves our understanding of how climate change may affect avalanche activity. We used...
Authors
Erich H. Peitzsch, Eran Hood, John Harley, Daniel Kent Stahle, Nicholas E. Kichas, Gabriel J. Wolken

The transmission patterns of the endosymbiont Wolbachia within the Hawaiian Drosophilidae adaptive radiation The transmission patterns of the endosymbiont Wolbachia within the Hawaiian Drosophilidae adaptive radiation

The evolution of endosymbionts and their hosts can lead to highly dynamic interactions with varying fitness effects for both the endosymbiont and host species. Wolbachia, a ubiquitous endosymbiont of arthropods and nematodes, can have both beneficial and detrimental effects on host fitness. We documented the occurrence and patterns of transmission of Wolbachia within the Hawaiian...
Authors
Renee L. Corpuz, Mona Renee Bellinger, Anne Veillet, Karl N. Magnacca, Donald K. Price

Landscape diversity promotes stable food-web architectures in large rivers Landscape diversity promotes stable food-web architectures in large rivers

Uncovering relationships between landscape diversity and species interactions is crucial for predicting how ongoing land-use change and homogenization will impact the stability and persistence of communities. However, such connections have rarely been quantified in nature. We coupled high-resolution river sonar imaging with annualized energetic food webs to quantify relationships among...
Authors
Eric Arthur Scholl, Wyatt F. Cross, Christopher S. Guy, Addie J. Dutton, James R. Junker

Performance evaluation of a channel rehabilitation project on the Lower Missouri River and implications for the dispersal of larval pallid sturgeon Performance evaluation of a channel rehabilitation project on the Lower Missouri River and implications for the dispersal of larval pallid sturgeon

In the Lower Missouri River, extensive channel modifications have altered hydraulic and morphologic conditions and reduced the river's ecological integrity. One species that has been adversely affected by these changes is the pallid sturgeon (Scaphirhynchus albus). Mainstem dams on the Missouri River restrict the upstream migration of adults and limit the downstream dispersal of larvae
Authors
Brandon James Sansom, Bruce Call, Carl J. Legleiter, R. B. Jacobson

Migration timing and tributary use of spawning flannelmouth sucker (Catostomus latipinnis) Migration timing and tributary use of spawning flannelmouth sucker (Catostomus latipinnis)

Spawning phenology and associated migrations of fishes are often regulated by factors such as temperature and stream discharge, but flow regulation of mainstem rivers coupled with climate change might disrupt these cues and affect fitness. Flannelmouth sucker (Catostomus latipinnis) persisting in heavily modified river networks are known to spawn in tributaries that might provide better...
Authors
Sophia M. Bonjour, Keith B. Gido, Mark C. McKinstry, Charles N. Cathcart, Matthew R. Bogaard, Maria C. Dzul, Brian D. Healy, Zachary E. Hooley-Underwood, David L. Rogowski, Charles B. Yackulic

Movement and behavioral states of common carp (Cyprinus carpio) in response to a behavioral deterrent in a navigational lock Movement and behavioral states of common carp (Cyprinus carpio) in response to a behavioral deterrent in a navigational lock

Freshwater ecosystems are some of the most affected by biological invasions due, in part, to the introduction of invasive carp worldwide. Where carp have become established, management programs often seek to limit further range expansion into new areas by reducing their movement through interconnected rivers and waterways. Lock and dams are important locations for non-physical deterrents...
Authors
Maggie Jo Raboin, John Plumb, Matthew D. Sholtis, David Smith, P. Ryan Jackson, Jose Rivera, C. D. Suski, Aaron R. Cupp

Soil salinity and water level interact to generate tipping points in low salinity tidal wetlands responding to climate change Soil salinity and water level interact to generate tipping points in low salinity tidal wetlands responding to climate change

Low salinity tidal wetlands (LSTW) are vulnerable to sea level rise and saltwater intrusion, thus their carbon sequestration capacity is threatened. However, the thresholds of rapid changes in carbon dynamics and biogeochemical processes in LSTW due to changes in hydroperiod and salinity regime remain unclear. In this study, we examined the effects of soil porewater salinity and water...
Authors
Hongqing Wang, Ken Krauss, Gregory E. Noe, Zhaohua Dai, Carl C. Trettin

Climate vulnerability for a desert fish: Integrating hydrologic exposures, adaptive capacity, and growth potential Climate vulnerability for a desert fish: Integrating hydrologic exposures, adaptive capacity, and growth potential

Climate vulnerability can be evaluated by multiple organismal responses. We developed a climate vulnerability framework focused on growth potential of redband trout (Oncorhynchus mykiss newberri). We employed a bioenergetics model to evaluate spatial variability in growth potential in relation to constraints on body size imposed by stream flow, physiological responses linked to variable...
Authors
Joseph R. Benjamin, Jason Dunham, Kara Anlauf-Dunn, Erika J. Eliason

A genome assembly for the southern Pacific rattlesnake, Crotalus oreganus helleri, in the western rattlesnake species complex A genome assembly for the southern Pacific rattlesnake, Crotalus oreganus helleri, in the western rattlesnake species complex

Rattlesnakes play important roles in their ecosystems by regulating prey populations, are involved in complex coevolutionary dynamics with their prey, and exhibit a variety of unusual adaptations, including maternal care, heat-sensing pit organs, hinged fangs, and medically-significant venoms. The western rattlesnake (Crotalus oreganus) is one of the widest ranging rattlesnake species...
Authors
Erin P. Westeen, Merly Escalona, Matthew Holding, Eric Beraut, Colin Fairbairn, Mohan P. A. Marimuthu, Oanh Nguyen, Ralph Perri, Robert N. Fisher, Erin Toffelmier, H. Bradley Shaffer, Ian J. Wang

Genetic erosion in an endangered desert fish during a multidecadal megadrought despite long-term supportive breeding Genetic erosion in an endangered desert fish during a multidecadal megadrought despite long-term supportive breeding

Human water use combined with a recent megadrought have reduced river and stream flow through the Southwestern United States and led to periodic drying of formerly perennial river segments. Reductions in snowmelt runoff and increased extent of drying collectively threaten short-lived, obligate aquatic species, including the endangered Rio Grande silvery minnow. This species experiences...
Authors
Megan J. Osborne, Thomas P. Archdeacon, Charles B. Yackulic, Robert K. Dudley, Guilherme Caeiro-Dias, Thomas F. Turner
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