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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42712

Prioritizing restoration areas to conserve multiple sagebrush-associated wildlife species Prioritizing restoration areas to conserve multiple sagebrush-associated wildlife species

Strategic restoration of altered habitat is one method for addressing worldwide biodiversity declines. Within the sagebrush steppe of western North America, habitat degradation has been linked to declines in many species, making restoration a priority for managers; however, limited funding, spatiotemporal variation in restoration success, and the need to manage for diverse wildlife...
Authors
Courtney Jean Duchardt, Adrian P. Monroe, Julie A. Heinrichs, Michael S. O’Donnell, David R. Edmunds, Cameron L. Aldridge

Assessing habitat change and migration of barrier islands Assessing habitat change and migration of barrier islands

Barrier islands are dynamic environments that experience gradual change from waves, tides, and currents, and rapid change from extreme storms. These islands are expected to change drastically over the coming century due to accelerated sea-level rise and changes in frequency and intensity of storm events. The dynamic nature of barrier islands coupled with the importance of these...
Authors
Nicholas Enwright, Lei Wang, P. Soupy Dalyander, Hongqing Wang, Michael Osland, Rangley C. Mickey, Robert L. Jenkins, Elizabeth Godsey

U.S. Geological Survey landscape science strategy 2020–2030 U.S. Geological Survey landscape science strategy 2020–2030

Across our Nation, multiple Federal, State, Tribal, and local governments are working with stakeholders and landowners to restore, conserve, and manage lands and resources to benefit fish, wildlife, and people. One of the largest Federal efforts is led by the U.S. Department of the Interior (DOI), with multiple DOI agencies working to conserve and manage public lands, resources, and...
Authors
Karen E. Jenni, Sarah K. Carter, Nicholas G. Aumen, Zachary H. Bowen, John B. Bradford, Michael A. Chotkowski, Leslie Hsu, Peter S. Murdoch, Scott W. Phillips, Kevin L. Pope, Rudy Schuster, Melanie J. Steinkamp, Jake Weltzin, George Z. Xian

Translocations maintain genetic diversity and increase connectivity in sea otters, Enhydra lutris Translocations maintain genetic diversity and increase connectivity in sea otters, Enhydra lutris

Sea otters, Enhydra lutris, were once abundant along the nearshore areas of the North Pacific. The international maritime fur trade that ended in 1911 left 13 small remnant populations with low genetic diversity. Subsequent translocations into previously occupied habitat resulted in several reintroduced populations along the coast of North America. We sampled sea otters between 2008 and...
Authors
Shawn E. Larson, Roderick B. Gagne, James L. Bodkin, Michael J. Murray, Katherine Ralls, Lizabeth Bowen, Raphael Leblois, Sylvain Piry, Maria Cecilia Penedo, M. Tim Tinker, Holly B. Ernest

Hemidactylus turcicus (Mediterranean Gecko). Endoparasite. Hemidactylus turcicus (Mediterranean Gecko). Endoparasite.

Hemidactylus turcicus is a native of western India, Somalia, the Middle East, and the Mediterranean region and is one of the most successful invasive species in the world (Kraus. 2009. Alien Reptiles and Amphibians: A Scientific Compendium and Analysis. Springer Verlag, Berlin. 563 pp.). Since its introduction into the USA via the Port of Miami, Florida, around 1915, the range of this...
Authors
Chris T. McAllister, Charles R Bursey, Samuel R Fisher, Chelsea E Martin, Robert N. Fisher

Decision analysis of barrier placement and targeted removal to control invasive carp in the Tennessee River Basin Decision analysis of barrier placement and targeted removal to control invasive carp in the Tennessee River Basin

Controlling range expansion of invasive carp (specifically Hypophthalmichthys spp.) on the Tennessee River is important to conserve the ecological and economic benefits provided by the river. We collaborated with State and Federal agencies (the stakeholder group) to develop a decision framework and decision support model to evaluate strategies to control carp expansion in the Tennessee...
Authors
Max Post van der Burg, David R. Smith, Aaron R. Cupp, Mark W. Rogers, Duane Chapman

Land use change influences ecosystem function in headwater streams of the Lowland Amazon Basin Land use change influences ecosystem function in headwater streams of the Lowland Amazon Basin

Intensive agriculture alters headwater streams, but our understanding of its effects is limited in tropical regions where rates of agricultural expansion and intensification are currently greatest. Riparian forest protections are an important conservation tool, but whether they provide adequate protection of stream function in these areas of rapid tropical agricultural development has...
Authors
Kathi Jo Jankowski, Linda A. Deegan, Christopher Neill, HIllary L. Sullivan, Paulo Ilha, Leonardo Maracahipes-Santos, Nubia C.S. Marques, Marcia N. Macedo

Sea otter population collapse in southwest Alaska: Assessing ecological covariates, consequences, and causal factors Sea otter population collapse in southwest Alaska: Assessing ecological covariates, consequences, and causal factors

Sea otter (Enhydra lutris) populations in southwest Alaska declined substantially between about 1990 and the most recent set of surveys in 2015. Here we report changes in the distribution and abundance of sea otters, and covarying patterns in reproduction, mortality, body size and condition, diet and foraging behavior, food availability, health profiles, and exposure to environmental...
Authors
M. Tim Tinker, James L. Bodkin, Lizabeth Bowen, Brenda Ballachey, Gena Bentall, Alexander Burdin, Heather Coletti, George G. Esslinger, Brian B. Hatfield, Michael C. Kenner, Kimberly A. Kloecker, Brenda Konar, A. Keith Miles, Daniel Monson, Michael J. Murray, Ben Weitzman, James A. Estes

Is there an urban pesticide signature? Urban streams in five U.S. regions share common dissolved-phase pesticides but differ in predicted aquatic toxicity Is there an urban pesticide signature? Urban streams in five U.S. regions share common dissolved-phase pesticides but differ in predicted aquatic toxicity

Pesticides occur in urban streams globally, but the relation of occurrence to urbanization can be obscured by regional differences. In studies of five regions of the United States, we investigated the effect of region and urbanization on the occurrence and potential toxicity of dissolved pesticide mixtures. We analyzed 225 pesticide compounds in weekly discrete water samples collected...
Authors
Lisa H. Nowell, Patrick W. Moran, Laura M. Bexfield, Barbara Mahler, Peter C. Van Metre, Paul M. Bradley, Travis S. Schmidt, Daniel T. Button, Sharon L. Qi

Effects of tidally varying river flow on entrainment of juvenile salmon into Sutter and Steamboat Sloughs Effects of tidally varying river flow on entrainment of juvenile salmon into Sutter and Steamboat Sloughs

Survival of juvenile salmonids in the Sacramento–San Joaquin Delta (Delta) varies by migration route, and thus the proportion of fish that use each route affects overall survival through the Delta. Understanding factors that drive routing at channel junctions along the Sacramento River is therefore critical to devising management strategies that maximize survival. Here, we examine...
Authors
Jason G. Romine, Russell Perry, Paul Stumpner, Aaron R. Blake, Jon R. Burau

Processing coastal imagery with Agisoft Metashape Professional Edition, version 1.6—Structure from motion workflow documentation Processing coastal imagery with Agisoft Metashape Professional Edition, version 1.6—Structure from motion workflow documentation

Introduction Structure from motion (SFM) has become an integral technique in coastal change assessment; the U.S. Geological Survey (USGS) used Agisoft Metashape Professional Edition photogrammetry software to develop a workflow that processes coastline aerial imagery collected in response to storms since Hurricane Florence in 2018. This report details step-by-step instructions to create...
Authors
Jin-Si R. Over, Andrew C. Ritchie, Christine J. Kranenburg, Jenna A. Brown, Daniel D. Buscombe, Tom Noble, Christopher R. Sherwood, Jonathan A. Warrick, Phillipe A. Wernette
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