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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42871

Novel molecular resources to facilitate future genetics research on freshwater mussels (Bivalvia: Unionidae) Novel molecular resources to facilitate future genetics research on freshwater mussels (Bivalvia: Unionidae)

Molecular data have been an integral tool in the resolution of the evolutionary relationships and systematics of freshwater mussels, despite the limited number of nuclear markers available for Sanger sequencing. To facilitate future studies, we evaluated the phylogenetic informativeness of loci from the recently published anchored hybrid enrichment (AHE) probe set Unioverse and developed...
Authors
Nathan A. Johnson, Chase H. Smith

Processes influencing marsh elevation change in low- and high-elevation zones of a temperate salt marsh Processes influencing marsh elevation change in low- and high-elevation zones of a temperate salt marsh

The movement of salt marshes into uplands and marsh submergence as sea level rises is well documented; however, predicting how coastal marshes will respond to rising sea levels is constrained by a lack of process-based understanding of how various marsh zones adjust to changes in sea level. To assess the way in which salt marsh zones differ in their elevation response to sea-level change...
Authors
Linda K. Blum, Robert R. Christian, Donald R. Cahoon, Patricia L. Wiberg

Using density surface models to estimate spatio-temporal changes in population densities and trend Using density surface models to estimate spatio-temporal changes in population densities and trend

Precise measures of population abundance and trend are needed for species conservation; these are most difficult to obtain for rare and rapidly changing populations. We compare uncertainty in densities estimated from spatio–temporal models with that from standard design‐based methods. Spatio–temporal models allow us to target priority areas where, and at times when, a population may most...
Authors
Richard J. Camp, David L Miller, Len Thomas, Steve T. Buckland, Steve J. Kendall

The effects of tissue fixation on sequencing and transcript abundance of nucleic acids from microdissected liver samples of smallmouth bass (Micropterus dolomieu) The effects of tissue fixation on sequencing and transcript abundance of nucleic acids from microdissected liver samples of smallmouth bass (Micropterus dolomieu)

There is an increasing emphasis on effects-based monitoring to document responses associated with exposure to complex mixtures of chemicals, climate change, pathogens, parasites and other environmental stressors in fish populations. For decades aquatic monitoring programs have included the collection of tissues preserved for microscopic pathology. Consequently, formalin-fixed, paraffin...
Authors
Heather L. Walsh, Adam Sperry, Vicki S. Blazer

Management of remnant tallgrass prairie by grazing or fire: Effects on plant communities and soil properties Management of remnant tallgrass prairie by grazing or fire: Effects on plant communities and soil properties

Tallgrass prairie is a disturbance‐dependent ecosystem that has suffered steep declines in the midwestern United States. The necessity of disturbance, typically fire or grazing, presents challenges to managers who must apply them on increasingly small and fragmented parcels. The goal of this study was to compare effects of management using cattle grazing or fire on vegetation and soil
Authors
Diane L. Larson, Daniel L. Hernández, Jennifer L. Larson, Julia B. Leone, Nora P. Pennarola

Disentangling the effects of multiple fires on spatially interspersed sagebrush (Artemisia spp.) communities Disentangling the effects of multiple fires on spatially interspersed sagebrush (Artemisia spp.) communities

Questions Relative to a landscape with a mosaic of two sagebrush community types and increasing fire frequency, we asked: (a) do vegetation characteristics vary significantly with number of times burned for each sagebrush community; (b) how do vegetation responses to different fire frequencies compare between the two sagebrush communities?Location Columbia Plateau Ecoregion, Washington...
Authors
Douglas J. Shinneman, Susan K. McIlroy, Marie-Anne de Graaff

Boreal blazes: Biomass burning and vegetation types archived in the Juneau Icefield Boreal blazes: Biomass burning and vegetation types archived in the Juneau Icefield

The past decade includes some of the most extensive boreal forest fires in the historical record. Warming temperatures, changing precipitation patterns, the desiccation of thick organic soil layers, and increased ignition from lightning all contribute to a combustive combination. Smoke aerosols travel thousands of kilometers, before blanketing the surfaces on which they fall, such as the...
Authors
Natalie Kehrwald, Jeramy Roland Jasmann, Melissa E. Dunham, David G. Ferris, Erich C. Osterburg, Joshua Kennedy, Jeremy C. Havens, Larry B. Barber, Sarah K. Fortner

Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2018 and Spring 2019, fifth annual report Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2018 and Spring 2019, fifth annual report

Introduction Kelp forests and rocky reefs are among the most recognized marine ecosystems and provide the primary habitat for several species of fishes, invertebrates, and algal assemblages (Stephens and others, 2006). In addition, kelp forests have been shown to be important carbon dioxide sinks (Wilmers and others, 2012) and are an important source of nearshore marine primary...
Authors
Michael C. Kenner, Joseph A. Tomoleoni

Larval Coregonus spp. diets and zooplankton community patterns in the Apostle Islands, Lake Superior Larval Coregonus spp. diets and zooplankton community patterns in the Apostle Islands, Lake Superior

With the exception of lake whitefish (Coregonus clupeaformis), relatively little is known about the early life history of larval coregonines in the Laurentian Great Lakes. For example, our knowledge of the feeding ecology of larval coregonines (excluding lake whitefish) is based on only 900 stomachs reported in the literature. Here, we describe the diets and demographics of larval...
Authors
Verena S. Lucke, Taylor R. Stewart, Mark Vinson, Jay D. Glase, Jason D. Stockwell

Modelling marsh-forest boundary transgression in response to storms and sea-level rise Modelling marsh-forest boundary transgression in response to storms and sea-level rise

The lateral extent and vertical stability of salt marshes experiencing rising sea levels depend on interacting drivers and feedbacks with potential for non‐linear behaviors. A two‐dimensional transect model was developed to examine changes in marsh and upland forest lateral extent and to explore controls on marsh inland transgression. Model behavior demonstrates limited and abrupt forest...
Authors
Joel A. Carr, Glenn R. Guntenspergen, Matt L. Kirwan

Repurposing a hindcast simulation of the 1926 Great Miami Hurricane, south Florida Repurposing a hindcast simulation of the 1926 Great Miami Hurricane, south Florida

Hydrodynamic model hindcasts of the surface water and groundwater of the Everglades and the greater Miami, Florida, area were used to simulate hydrology using estimated storm surge height, wind field, and rainfall for the Great Miami Hurricane (GMH), which struck on September 18, 1926. Ranked estimates of losses from hurricanes in inflation-adjusted dollars indicate that the GMH was one...
Authors
M. Dennis Krohn, Eric D. Swain, Catherine A. Langtimm, Jayantha Obeysekera

Distribution of deep-water scleractinian and stylasterid corals across abiotic environmental gradients on three seamounts in the Anegada Passage Distribution of deep-water scleractinian and stylasterid corals across abiotic environmental gradients on three seamounts in the Anegada Passage

In the Caribbean Basin the distribution and diversity patterns of deep-sea scleractinian corals and stylasterid hydrocorals are poorly known compared to their shallow-water relatives. In this study, we examined species distribution and community assembly patterns of scleractinian and stylasterid corals on three high-profile seamounts within the Anegada Passage, a deep-water throughway...
Authors
Steven R. Auscavitch, Jay J. Lunden, Alexandria Barkman, Andrea Quattrini, Amanda Demopoulos, Erik E. Cordes
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