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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Direct and indirect influences of macrophyte cover on abundance and growth of juvenile Atlantic salmon Direct and indirect influences of macrophyte cover on abundance and growth of juvenile Atlantic salmon

1. The relationships between macrophytes and the physical and biological characteristics of the environments that aquatic organisms inhabit are complex. Previous studies have shown that the macrophytes, Ranunculus (subgenus Batrachium), which are dominant in lowland chalk streams and widespread across Europe, can enhance juvenile Atlantic salmon abundance and growth to a greater degree...
Authors
Jessica E Marsh, J. Iwan Jones, Rasmus B. Lauridsen, James Grace, Pavel Kratina

Social effects of rabies infection in male vampire bats (Desmodus rotundus) Social effects of rabies infection in male vampire bats (Desmodus rotundus)

Rabies virus (RABV) transmitted by the common vampire bat (Desmodus rotundus) poses a threat to agricultural development and public health throughout the Neotropics. The ecology and evolution of rabies host-pathogen dynamics are influenced by two infection-induced behavioral changes. RABV-infected hosts often exhibit increased aggression which facilitates transmission, and rabies also...
Authors
Elsa M. Cárdenas-Canales, Sebastian Stockmaier, Eleanor Cronin, Tonie E. Rocke, Jorge E. Osorio, Gerald G. Carter

Landscape genetics of a sub-alpine toad: Climate change predicted to induce upward range shifts via asymmetrical migration corridors Landscape genetics of a sub-alpine toad: Climate change predicted to induce upward range shifts via asymmetrical migration corridors

Climate change is expected to have a major hydrological impact on the core breeding habitat and migration corridors of many amphibians in the twenty-first century. The Yosemite toad (Anaxyrus canorus) is a species of meadow-specializing amphibian endemic to the high-elevation Sierra Nevada Mountains of California. Despite living entirely on federal lands, it has recently faced severe...
Authors
Paul A. Maier, Amy G. Vandergast, Steven M Ostoja, Andres Aguilar, Andrew J. Bohonak

Monitoring framework to evaluate effectiveness of aquatic and floodplain habitat restoration activities for native fish along the Willamette River, northwestern Oregon Monitoring framework to evaluate effectiveness of aquatic and floodplain habitat restoration activities for native fish along the Willamette River, northwestern Oregon

Since 2008, large-scale restoration programs have been implemented along the Willamette River, Oregon, to address historical losses of floodplain habitats caused by dam construction, bank protection, large wood removal, land conversion, and other anthropogenic influences. The Willamette Focused Investment Partnership (WFIP) restoration initiative brings together more than 16...
Authors
Mackenzie K. Keith, J. Rose Wallick, Rebecca L. Flitcroft, Tobias J. Kock, Laura A. Brown, Rich Miller, Joan C. Hagar, Kathleen Guillozet, Krista L. Jones

Socioeconomic resilience to climatic extremes in a freshwater fishery Socioeconomic resilience to climatic extremes in a freshwater fishery

Heterogeneity is a central feature of ecosystem resilience, but how this translates to socioeconomic resilience depends on people’s ability to track shifting resources in space and time. Here, we quantify how climatic extremes have influenced how people (fishers) track economically valuable ecosystem services (fishing opportunities) across a range of spatial scales in rivers of the...
Authors
Timothy Joseph Cline, Clint C. Muhlfeld, Ryan P. Kovach, Robert Al-Chokhachy, David Schmetterling, Diane Whited, Abigail Lynch

Using a vegetation index to assess wetland condition in the Prairie Pothole Region of North America Using a vegetation index to assess wetland condition in the Prairie Pothole Region of North America

Wetlands deliver a suite of ecosystem services to society. Anthropogenic activities, such as wetland drainage, have resulted in considerable wetland loss and degradation, diminishing the intrinsic value of wetland ecosystems worldwide. Protecting remaining wetlands and restoring degraded wetlands are common management practices to preserve and reclaim wetland benefits to society...
Authors
Brian Tangen, Sheel Bansal, Seth Jones, Cami S. Dixon, Amanda M. Nahlik, Edward S. DeKeyser, Christina L. M. Hargiss, David M. Mushet

Long-term apparent survival of a cold-stunned subpopulation of juveniles green turtles Long-term apparent survival of a cold-stunned subpopulation of juveniles green turtles

Understanding the effects of extreme weather on animal populations is fundamental to ecological and conservation sciences and species management. Climate change has resulted in both warm and cold temperature extremes, including an increased frequency of severe cold snaps at middle latitudes in North America. These unusually cold air masses cause rapid declines in nearshore ocean...
Authors
Robert Michael Mollenhauer, Margaret Lamont, Allen M. Foley

Distribution and demography of coastal Cactus Wrens (Campylorhynchus brunneicapillus) in southern San Diego County, California — 2021 Data summary Distribution and demography of coastal Cactus Wrens (Campylorhynchus brunneicapillus) in southern San Diego County, California — 2021 Data summary

We surveyed for coastal Cactus Wren (Campylorhynchus brunneicapillus) in 378 established plots in southern San Diego County in 2021, encompassing 3 genetic clusters (Otay, Lake Jennings, and Sweetwater/Encanto). Two surveys were completed at each plot between March 1 and July 31. Cactus Wrens were detected in 130 plots (34 percent of plots), remaining virtually the same as the percentage...
Authors
Suellen Lynn, Barbara E. Kus

Temporal mismatch in space use by a sagebrush obligate species after large-scale wildfire Temporal mismatch in space use by a sagebrush obligate species after large-scale wildfire

The increase in size and frequency of wildfires in sagebrush steppe ecosystems has significant impacts on sagebrush obligate species. We modeled seasonal habitat use by female greater sage-grouse (Centrocercus urophasianus) in the Trout Creek Mountains of Oregon and Nevada, USA, to identify landscape characteristics that influenced sage-grouse habitat selection and to create predictive...
Authors
Elizabeth M. Schuyler, Christian A. Hagen, Christopher R. Anthony, Lee J. Foster, Katie Dugger

Quantitative SWOT analysis: A structured and collaborative approach to reintroduction site selection for the endangered Pacific pocket mouse Quantitative SWOT analysis: A structured and collaborative approach to reintroduction site selection for the endangered Pacific pocket mouse

Species extinction and loss of biodiversity are major crises in the Anthropocene. Translocations of threatened and endangered species, the movement of individuals to augment existing or establish new populations, are increasingly important conservation tools, but have historically had limited success. Selection of a suitable receiver site is essential to translocation success, with poor...
Authors
Rachel Y. Chock, William B Miller, Shauna N D King, Cheryl S. Brehme, Robert N. Fisher, Hans Sin, Peggy Wilcox, Jill Terp, Scott Tremor, Matthew R Major, Korie Merrill, Wayne D Spencer, Sherri Sullivan, Deborah M Shier

Rapid ʻŌhiʻa Death in Hawaiʻi Rapid ʻŌhiʻa Death in Hawaiʻi

Ceratocystis lukuohia and Ceratocystis huliohia are two newly recognized fungi that have arrived in Hawai‘i and are causing a serious vascular wilt and canker disease, respectively, of ‘ōhi‘a trees (Metrosideros polymorpha), the most common and important tree species in Hawai‘i. Management of these diseases has presented challenges due to unique etiological aspects and the exceptionally...
Authors
Philip Cannon, James B. Friday, Thomas Harrington, Lisa Keith, Marc Hughes, Rob Hauff, Flint Hughes, Ryan L. Perroy, David Benitez, Kylle Roy, Robert W. Peck, Sheri L. Smith, Blaine Luiz, Susan Cordell, Christian Giardina, Jennifer Juzwik, Stephanie G. Yelenik, Zachary Cook

A conceptual framework to integrate biodiversity, ecosystem function, and ecosystem service models A conceptual framework to integrate biodiversity, ecosystem function, and ecosystem service models

Global biodiversity and ecosystem service models typically operate independently. Ecosystem service projections thus may be overly optimistic because they do not account for the role of biodiversity in maintaining ecological functions underpinning their provision. We review models used in recent global model intercomparison projects and develop a novel model integration framework to more...
Authors
Sarah R. Weiskopf, Bonnie J.E. Myers, Maria Isabel Arce-Plata, Julia L. Blanchard, Simon Ferrier, Elizabeth A. Fulton, Mike Harfoot, Forest Isbell, Justin A. Johnson, Akira S. Mori, Ensheng Weng, Zuzana Harmáčková, Maria Cecilia Londono-Murcia, Brian W. Miller, Laura Pereira, Isabel M.D. Rosa
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