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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42876

Black carp Mylopharyngodon piceus (Richardson, 1846) mouth gape and size preference of a bivalve prey Black carp Mylopharyngodon piceus (Richardson, 1846) mouth gape and size preference of a bivalve prey

Black carp Mylopharyngodon piceus (Richardson, 1846) have been widely used as biological control of snails in aquaculture and were imported to the United States in the 1970s and 1980s for this purpose. Prior research emphasizes the species’ propensity to control gastropods, but since subsequent escape and establishment of black carp in portions of the Mississippi River Basin, concerns...
Authors
Patrick Kroboth, Benjamin H. Stahlschmidt, Duane Chapman

Flooding-induced failure of an invasive Burmese Python nest in southern Florida Flooding-induced failure of an invasive Burmese Python nest in southern Florida

It is important to understand the factors affecting the reproductive success of an invasive species to estimate population size and develop management plans. There remains much we do not understand about the reproductive biology of invasive Burmese Pythons in both their native and invasive range. Oviposition site selection is an important factor in determining reproductive success as...
Authors
Mark Robert Sandfoss, Lisa Marie McBride, Gretchen Erika Anderson, Amanda Marie Kissel, Matthew McCollister, Christina M. Romagosa, Amy A. Yackel Adams

Methylmercury effects on birds: A review, meta-analysis, and development of toxicity reference values for injury assessment based on tissue residues and diet Methylmercury effects on birds: A review, meta-analysis, and development of toxicity reference values for injury assessment based on tissue residues and diet

Birds are used as bioindicators of environmental mercury (Hg) contamination, and toxicity reference values are needed for injury assessments. We conducted a comprehensive review, summarized data from 168 studies, performed a series of Bayesian hierarchical meta-analyses, and developed new toxicity reference values for the effects of methylmercury (MeHg) on birds using a benchmark dose...
Authors
Joshua T. Ackerman, Sarah H. Peterson, Mark P. Herzog, Julie L. Yee

Post-fire reference densities for giant sequoia seedlings in a new era of high-severity wildfires Post-fire reference densities for giant sequoia seedlings in a new era of high-severity wildfires

Many forests globally are experiencing increases in large, high-severity wildfires, often with increasingly inadequate post-fire tree regeneration. To identify areas that might need post-fire planting, forest managers have a growing need for seedling reference densities – the natural seedling densities expected to be adequate to regenerate a forest – to compare with observed post-fire...
Authors
Nathan L. Stephenson, Anthony C. Caprio, David Nicolas Bertil Soderberg, Adrian Das, Eva Louisa Lopez, A. Park Williams

Cytology in cnidaria using Exaiptasia as a model Cytology in cnidaria using Exaiptasia as a model

A need exists for additional methods to examine cnidaria at the cellular level to aid our understanding of health, anatomy, and physiology of this important group of organisms. This need is particularly acute given that disease is emerging as a major factor in declines of ecologically important functional groups such as corals. Here we describe a simple method to process cnidarian cells...
Authors
Thierry M. Work, Chutimon Singarkhan, Tina Weatherby

Flexible migration and habitat use strategies of an endangered waterbird during hydrological drought Flexible migration and habitat use strategies of an endangered waterbird during hydrological drought

Wildlife species confront threats from climate and land use change, exacerbating the influence of extreme climatic events on populations and biodiversity. Migratory waterbirds are especially vulnerable to hydrological drought via reduced availability of surface water habitats. We assessed how whooping cranes (Grus americana) modified habitat use and migration strategies during drought to...
Authors
Aaron T. Pearse, Andrew J. Caven, David M. Baasch, Mark T. Bidwell, John A Conkin, David A. Brandt

Ecological inferences on invasive carp survival using hydrodynamics and egg drift models Ecological inferences on invasive carp survival using hydrodynamics and egg drift models

Bighead carp (Hypophthalmichthys nobilis), silver carp (H. molitrix), black carp (Mylopharyngodon piceus), and grass carp (Ctenopharyngodon idella), are invasive species in North America. However, they hold significant economic importance as food sources in China. The drifting stage of carp eggs has received great attention because egg survival rate is strongly affected by river...
Authors
Ruichen Xu, Duane Chapman, Caroline M. Elliott, Bruce Call, Robert B. Jacobson, Binbin Yang

A hierarchical model for eDNA fate and transport dynamics accommodating low concentration samples A hierarchical model for eDNA fate and transport dynamics accommodating low concentration samples

Environmental DNA (eDNA) sampling is an increasingly important tool for answering ecological questions and informing aquatic species management; however, several factors currently limit the reliability of ecological inference from eDNA sampling. Two particular challenges are 1) determining species source location(s) and 2) accurately and precisely measuring low concentration eDNA samples...
Authors
Ben Augustine, Patrick Ross Hutchins, Devin Nicole Jones-Slobodian, Jacob R. Williams, Eric Leinonen, Adam Sepulveda

Environmental DNA dynamics of three species of unionid freshwater mussels Environmental DNA dynamics of three species of unionid freshwater mussels

North American freshwater mussels are of special conservation concern due to their high endemism and the multiple anthropogenic stressors affecting them. Of the over 300 species in North America, nearly one third of these species are federally listed as threatened or endangered. Environmental DNA (eDNA) analysis has been successful in detecting freshwater mussels and could aid in...
Authors
Dannise Ruiz-Ramos, Nathan Thompson, Catherine A. Richter, Megan C. Voshage, Theresa M. Schreier, Christopher M. Merkes, Katy E. Klymus

Carotenoid skin ornaments as flexible indicators of male foraging behavior in a marine predator: Variation among Mexican colonies of brown booby (Sula leucogaster) Carotenoid skin ornaments as flexible indicators of male foraging behavior in a marine predator: Variation among Mexican colonies of brown booby (Sula leucogaster)

Carotenoid-dependent ornaments can reflect animals’ diet and foraging behaviors. However, this association should be spatially flexible and variable among populations to account for geographic variation in optimal foraging behaviors. We tested this hypothesis using populations of a marine predator (the brown booby, Sula leucogaster) that forage across a gradient in ocean depth in and...
Authors
Nathan P. Michael, Roxana Torres, Andreanna J. Welch, Jonathan J. Felis, Mario Erandi Bonillas-Monge, Josh Adams, Samantha Hodgson, Laura Lopez-Marques, Alejadro Martínez-Flores, Gala Enidh Castro-Mejias, Anne E. Wiley

Eggshell membrane thickness and its contribution to total eggshell thickness for 13 waterbird species Eggshell membrane thickness and its contribution to total eggshell thickness for 13 waterbird species

Eggshell thickness can be an indicator of environmental pollution in wild birds and shell quality in wild and domestic birds, but it is difficult to measure calcite eggshell thickness due to the presence of the adherent outer eggshell membrane. Eggshells of 13 waterbird species were divided in half longitudinally and the outer membrane was removed from one of the halves. Subsequently, we...
Authors
Gary M. Santolo, Sarah H. Peterson, Breanne Cooney, C. Alex Hartman, Mark P. Herzog, Joshua T. Ackerman

Wetland creation and reforestation of legacy surface mines in the Central Appalachian Region (USA): A potential climate-adaptation approach for pond-breeding amphibians? Wetland creation and reforestation of legacy surface mines in the Central Appalachian Region (USA): A potential climate-adaptation approach for pond-breeding amphibians?

Habitat restoration and creation within human-altered landscapes can buffer the impacts of climate change on wildlife. The Forestry Reclamation Approach (FRA) is a coal surface mine reclamation practice that enhances reforestation through soil decompaction and the planting of native trees. Recently, wetland creation has been coupled with FRA to increase habitat available for wildlife...
Authors
Lauren Sherman, Christopher D. Barton, Jacquelyn C. Guzy, Rebecca N. Davenport, John J. Cox, Jeffery L. Larkin, Todd Fearer, Jillian C. Newman, Steven J. Price
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