Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42768
Existing evidence on the effects of climate variability and climate change on ungulates in North America: A systematic map Existing evidence on the effects of climate variability and climate change on ungulates in North America: A systematic map
Background Climate is an important driver of ungulate life-histories, population dynamics, and migratory behaviors. Climate conditions can directly impact ungulates via changes in the costs of thermoregulation and locomotion, or indirectly, via changes in habitat and forage availability, predation, and species interactions. Many studies have documented the effects of climate variability...
Authors
Kate Malpeli, Sarah C. Endyke, Sarah R. Weiskopf, Laura Thompson, Ciara G. Johnson, Katherine Anne Kurth, Maxfield A. Carlin
Classification of lakebed geologic substrate in autonomously collected benthic imagery using machine learning Classification of lakebed geologic substrate in autonomously collected benthic imagery using machine learning
Mapping benthic habitats with bathymetric, acoustic, and spectral data requires georeferenced ground-truth information about habitat types and characteristics. New technologies like autonomous underwater vehicles (AUVs) collect tens of thousands of images per mission making image-based ground truthing particularly attractive. Two types of machine learning (ML) models, random forest (RF)...
Authors
Joseph K. Geisz, Phillipe Alan Wernette, Peter C. Esselman
Deep learning workflow to support in-flight processing of digital aerial imagery for wildlife population surveys Deep learning workflow to support in-flight processing of digital aerial imagery for wildlife population surveys
Deep learning shows promise for automating detection and classification of wildlife from digital aerial imagery to support cost-efficient remote sensing solutions for wildlife population monitoring. To support in-flight orthorectification and machine learning processing to detect and classify wildlife from imagery in near real-time, we evaluated deep learning methods that address...
Authors
Tsung-Wei Ke, Stella X Yu, Mark D. Koneff, David L. Fronczak, Luke J. Fara, Travis Harrison, Kyle Lawrence Landolt, Enrika Hlavacek, Brian R. Lubinski, Timothy White
Propensity score matching mitigates risk of faulty inferences in observational studies of effectiveness of restoration trials Propensity score matching mitigates risk of faulty inferences in observational studies of effectiveness of restoration trials
Determining effectiveness of restoration treatments is an important requirement of adaptive management, but it can be non-trivial where only portions of large and heterogeneous landscapes of concern can be treated and sampled. Bias and non-randomness in the spatial deployment of treatment and thus sampling is nearly unavoidable in the data available for large-scale management trials, and...
Authors
Chad Raymond Kluender, Matthew J. Germino, Christopher A Anthony
Identifying an understudied interface: Preliminary evaluation of the use of retention ponds on commercial poultry farms by wild waterfowl Identifying an understudied interface: Preliminary evaluation of the use of retention ponds on commercial poultry farms by wild waterfowl
While the recent incursion of highly pathogenic avian influenza into North America has resulted in notable losses to the commercial poultry industry, the mechanism by which virus enters commercial poultry houses is still not understood. One theorized mechanism is that waterfowl shed virus into the environment surrounding poultry farms, such as into retention ponds, and is then...
Authors
Jeffery D. Sullivan, Ayla McDonough, Lauren Lescure, Diann Prosser
Quantifying and evaluating strategies to decrease carbon dioxide emissions generated from tourism to Yellowstone National Park Quantifying and evaluating strategies to decrease carbon dioxide emissions generated from tourism to Yellowstone National Park
The tourism industry needs strategies to reduce emissions and hasten the achievement of global carbon dioxide (CO2) emission reduction targets. Using a case study approach, we estimated CO2 emissions related to park tourism in Yellowstone National Park (USA) generated from transit to and from the park, transit within the park, accommodations, and park operations. Results indicate tourism...
Authors
Emily J. Wilkins, Dani T. Dagan, Jordan W. Smith
Effects and perceptions of weather, climate, and climate change on outdoor recreation and nature-based tourism in the United States: A systematic review Effects and perceptions of weather, climate, and climate change on outdoor recreation and nature-based tourism in the United States: A systematic review
Weather, climate, and climate change all effect outdoor recreation and tourism, and will continue to cause a multitude of effects as the climate warms. We conduct a systematic literature review to better understand how weather, climate, and climate change affect outdoor recreation and nature-based tourism across the United States. We specifically explore how the effects differ by...
Authors
Emily J. Wilkins, Lydia Horne
Range-wide genetic analysis of an endangered bumble bee (Bombus affinis, Hymenoptera: Apidae) reveals population structure, isolation by distance, and low colony abundance Range-wide genetic analysis of an endangered bumble bee (Bombus affinis, Hymenoptera: Apidae) reveals population structure, isolation by distance, and low colony abundance
Declines in bumble bee species range and abundances are documented across multiple continents and have prompted the need for research to aid species recovery and conservation. The rusty patched bumble bee (Bombus affinis) is the first federally listed bumble bee species in North America. We conducted a range-wide population genetics study of B. affinis from across all extant conservation...
Authors
John Mola, Ian S. Pearse, Michelle Boone, Elaine Evans, Mark J. Hepner, Robert Jean, Jade Kochanski, Cade Nordmeyer, Eric Runquist, Tamara A. Smith, Jaime Strange, Jay Watson, Jonathan B Koch
The potential influence of genome-wide adaptive divergence on conservation translocation outcome in an isolated greater sage-grouse population The potential influence of genome-wide adaptive divergence on conservation translocation outcome in an isolated greater sage-grouse population
Conservation translocations are an important conservation tool commonly employed to augment declining or reestablish extirpated populations. One goal of augmentation is to increase genetic diversity and reduce the risk of inbreeding depression (i.e., genetic rescue). However, introducing individuals from significantly diverged populations risks disrupting coadapted traits and reducing...
Authors
Shawna J Zimmerman, Cameron L. Aldridge, Michael A Schroeder, Jennifer A. Fike, Robert S. Cornman, Sara J. Oyler-McCance
Vegetation, fuels, and fire-behavior responses to linear fuel-break treatments in and around burned sagebrush steppe: Are we breaking the grass-fire cycle? Vegetation, fuels, and fire-behavior responses to linear fuel-break treatments in and around burned sagebrush steppe: Are we breaking the grass-fire cycle?
Background Linear fuel breaks are being implemented to moderate fire behavior and improve wildfire containment in semiarid landscapes such as the sagebrush steppe of North America, where extensive losses in perennial vegetation and ecosystem functioning are resulting from invasion by exotic annual grasses (EAGs) that foster large and recurrent wildfires. However, fuel-break construction...
Authors
Matthew J. Germino, Samuel J. Price, Susan J Prichard
Comparing modern identification methods for wild bees: Metabarcoding and image-based morphological taxonomic assignment Comparing modern identification methods for wild bees: Metabarcoding and image-based morphological taxonomic assignment
With the decline of bee populations worldwide, studies determining current wild bee distributions and diversity are increasingly important. Wild bee identification is often completed by experienced taxonomists or by genetic analysis. The current study was designed to compare two methods of identification including: (1) morphological identification by experienced taxonomists using images...
Authors
Cassandra Smith, Robert S. Cornman, Jennifer A. Fike, Johanna M. Kraus, Sara J. Oyler-McCance, Carrie E. Givens, Michelle L. Hladik, Mark W. Vandever, Dana W. Kolpin, Kelly Smalling
Nontarget effects of pre-emergent herbicides and a bioherbicide on soil resources, processes, and communities Nontarget effects of pre-emergent herbicides and a bioherbicide on soil resources, processes, and communities
Community-type conversions, such as replacement of perennials by exotic annual grasses in semiarid desert communities, are occurring due to plant invasions that often create positive plant–soil feedbacks, which favor invaders and make restoration of native perennials difficult. Exotic annual grass control measures, such as pre-emergent herbicides, can also alter soil ecosystems directly...
Authors
Brynne E. Lazarus, Matthew J. Germino, Marie-Anne de Graaff