Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43327
Skin and fur bacterial diversity and community structure on American southwestern bats: effects of habitat, geography and bat traits Skin and fur bacterial diversity and community structure on American southwestern bats: effects of habitat, geography and bat traits
Microorganisms that reside on and in mammals, such as bats, have the potential to influence their host’s health and to provide defenses against invading pathogens. However, we have little understanding of the skin and fur bacterial microbiota on bats, or factors that influence the structure of these communities. The southwestern United States offers excellent sites for the study of...
Authors
Ara S. Winter, Jennifer J. M. Hathaway, Jason C. Kimble, Debbie C. Buecher, Ernest W. Valdez, Andrea Porras-Alfaro, Jesse M. Young, Kaitlyn J. H. Read, Diana E. Northup
Detecting spatial patterns of rivermouth processes using a geostatistical framework for near-real-time analysis Detecting spatial patterns of rivermouth processes using a geostatistical framework for near-real-time analysis
This paper proposes a geospatial analysis framework and software to interpret water-quality sampling data from towed undulating vehicles in near-real time. The framework includes data quality assurance and quality control processes, automated kriging interpolation along undulating paths, and local hotspot and cluster analyses. These methods are implemented in an interactive Web...
Authors
Wenzhao Xu, Paris D. Collingsworth, Barbara Bailey, Martha L. Carlson Mazur, Jeff Schaeffer, Barbara Minsker
Swimming behaviour and ascent paths of brook trout in a corrugated culvert Swimming behaviour and ascent paths of brook trout in a corrugated culvert
Culverts may restrict fish movements under some hydraulic conditions such as shallow flow depths or high velocities. Although swimming capacity imposes limits to passage performance, behaviour also plays an important role in the ability of fish to overcome velocity barriers. Corrugated metal culverts are characterized by unsteady flow and existence of low‐velocity zones, which can...
Authors
Elsa Goerig, Normand E. Bergeron, Theodore R. Castro-Santos
Otters, marine Otters, marine
No abstract available.
Authors
M. Tim Tinker, James L. Bodkin, M. Ben-Davic, J. A. Estes
Complete sequences of 4 viral hemorrhagic septicemia virus IVb isolates and their virulence in northern pike fry Complete sequences of 4 viral hemorrhagic septicemia virus IVb isolates and their virulence in northern pike fry
Four viral hemorrhagic septicemia virus (VHSV) genotype IVb isolates were sequenced, their genetic variation explored, and comparative virulence assayed with experimental infections of northern pike Esox lucius fry. In addition to the type strain MI03, the complete 11183 bp genome of the first round goby Neogobius melanostomus isolate from the St. Lawrence River, and the 2013 and 2014...
Authors
Rodman G. Getchell, Emily R. Cornwell, Steven Bogdanowicz, Jose Andres, William N. Batts, Gael Kurath, Rachel Breyta, Joanna G. Choi, John M. Farrell, Paul R. Bowser
Inference of timber harvest effects on survival of stream amphibians is complicated by movement Inference of timber harvest effects on survival of stream amphibians is complicated by movement
The effects of contemporary logging practices on headwater stream amphibians have received considerable study but with conflicting or ambiguous results. We posit that focusing inference on demographic rates of aquatic life stages may help refine understanding, as aquatic and terrestrial impacts may differ considerably. We investigated in-stream survival and movement of two stream...
Authors
Nathan Chelgren, M. J. Adams
Candoia Bibroni (Pacific Boa). Diet Candoia Bibroni (Pacific Boa). Diet
No abstract available.
Authors
Adam G. Clause, Mark J. Fraser, Sarah Pene, Nunia Thomas-Moko, Robert N. Fisher
High altitude flights by ruddy shelduck Tadorna ferruginea during trans-Himalayan migrations High altitude flights by ruddy shelduck Tadorna ferruginea during trans-Himalayan migrations
Birds that migrate across high altitude mountain ranges are faced with the challenge of maintaining vigorous exercise in environments with limited oxygen. Ruddy shelducks are known to use wintering grounds south of the Tibetan Plateau at sea level and breeding grounds north of Himalayan mountain range. Therefore, it is likely these shelducks are preforming high altitude migrations. In...
Authors
N. Parr, S. Bearhop, David C. Douglas, J.Y. Takekawa, Diann J. Prosser, S.H. Newman, W.M. Perry, S. Balachandran, M.J. Witt, Y. Hou, Z. Lu, L.A. Hawkes
Methodological considerations regarding online extraction of water from soils for stable isotope determination Methodological considerations regarding online extraction of water from soils for stable isotope determination
No abstract available.
Authors
Brynne E. Lazarus, Matthew J. Germino
Timelines and mechanisms of wildlife population recovery following the Exxon Valdez oil spill Timelines and mechanisms of wildlife population recovery following the Exxon Valdez oil spill
Research and monitoring activities over the 28 years since the T/V Exxon Valdez ran aground and spilled oil into Prince William Sound, Alaska have led to an improved understanding of how wildlife populations were damaged, as well as the mechanisms and timelines of recovery. A key finding was that for some species, such as harlequin ducks and sea otters, chronic oil spill effects...
Authors
Daniel Esler, Brenda E. Ballachey, Craig O. Matkin, Daniel Cushing, Robert Kaler, James L. Bodkin, Daniel Monson, George G. Esslinger, Kimberly A. Kloecker
Variation in abundance of Pacific Blue Mussel (Mytilus trossulus) in the Northern Gulf of Alaska, 2006–2015 Variation in abundance of Pacific Blue Mussel (Mytilus trossulus) in the Northern Gulf of Alaska, 2006–2015
Mussels are conspicuous and ecologically important components of nearshore marine communities around the globe. Pacific blue mussels (Mytilus trossulus) are common residents of intertidal habitats in protected waters of the North Pacific, serving as a conduit of primary production to a wide range of nearshore consumers including predatory invertebrates, sea ducks, shorebirds, sea otters...
Authors
James L. Bodkin, Heather A. Coletti, Brenda E. Ballachey, Daniel Monson, Daniel Esler, Thomas A. Dean
Concepts: Assessing tiger population dynamics using capture–recapture sampling Concepts: Assessing tiger population dynamics using capture–recapture sampling
Capture-recapture can be viewed as an animal survey method in which the count statistic is the total number of animals caught, and the associated detection probability is the probability of capture.
Authors
J. Andrew Royle, Arjun M. Gopalaswamy, Robert Dorazio, James D. Nichols, Devcharan Jathanna, Ravishankar Parameshwaran