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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 176717

Permafrost thaw controls iron flux from wetlands and sulfide-bearing rocks to Arctic rivers and streams Permafrost thaw controls iron flux from wetlands and sulfide-bearing rocks to Arctic rivers and streams

Recent warming has caused widespread iron mobilization into Arctic waterbodies that degrades ecosystems and threatens natural resources. Yet, understanding where and when iron flux occurs remains limited. Here, we investigate iron loading across regional to local scales in Arctic Alaska using climate, water chemistry, and borehole data together with mapped geology and permafrost presence...
Authors
Roman J. Dial, Caitlynn Hanna, Patrick F Sullivan, David Cooper, Christopher Tino, Daniel D Gregory, Charles Diamond, Michael Rieser, Dmitry Nicolsky, Kenneth Hill, Go Iwahana, Joshua C. Koch, Michael P. Carey, Lance Miller, Timothy J. Lyons

Persistence of coral reef structures into the twenty-first century Persistence of coral reef structures into the twenty-first century

Coral reefs provide important socioecological services but are vulnerable to climate change, which shifts the balance between the production and erosion of calcium carbonate (CaCO3). In this Review, we summarize understanding of reef accretion, describe the mechanisms of carbonate production and erosion, and consider the effects of future ocean warming and acidification on key reef...
Authors
Christopher E. Cornwall, Orlando Timmerman, Andreas Andersson, Denisa M. Berbece, Oscar Branson, Steeve Comeau, Travis A. Courtney, Simon D. Donner, Ian. Enochs, Ben P. Harvey, Ashtyn L. Isaak, Holly E. Koch, Cheryl A. Logan, Chris T. Perry, Verena Schoepf, Lauren T. Toth, Alice Webb

Petrography and mineralogy of selected pre-Middle Jurassic basement rocks beneath the Atlantic and Gulf Coastal Plains in Florida Petrography and mineralogy of selected pre-Middle Jurassic basement rocks beneath the Atlantic and Gulf Coastal Plains in Florida

Florida is covered by flat-lying sedimentary strata of the Atlantic and Gulf Coastal Plains. These strata have accumulated since Middle Jurassic time. The pre-Middle Jurassic, or basement, rocks that underlie the Coastal Plain in Florida are known only from drill cores and cuttings recovered from a relatively small number of boreholes. This data report presents petrographic observations...
Authors
Ryan T. Deasy, Mary E. Lupo, Ryan J. McAleer, J. Wright Horton,

PFAS contamination in Florida estuarine fishes: Levels, patterns, and estimated human and ecological health risks PFAS contamination in Florida estuarine fishes: Levels, patterns, and estimated human and ecological health risks

Per- and polyfluoroalkyl substances (PFAS) pose a significant health threat due to their environmental persistence and toxicity. While PFAS contamination is widespread in Florida, the state currently lacks fish consumption advisories (FCAs) for these compounds, despite existing FCAs for legacy pollutants. This study quantified 40 PFAS in edible muscle tissue from 264 fish (16 species)...
Authors
Erin L. Pulster, Devon Firesinger, Jonathan M. Petali, Christopher McCarthy, Douglas H. Adams

PFAS exposure suppresses leaf litter decomposition in a stream ecosystem PFAS exposure suppresses leaf litter decomposition in a stream ecosystem

Decomposition of organic matter is critical to the biogeochemical cycling of carbon and nutrients in all ecosystems. In streams, decomposition can be influenced by anthropogenic impacts, including contaminants. Per- and polyfluoroalkyl substances (PFAS) are resistant to degradation and widespread in freshwater ecosystems, yet little is known about their influence on organic matter...
Authors
Alison M. Zachritz, Abagael N. Pruitt, Therese M. Reisch, Daniele A. Miranda, Brittany G. Perrotta, Laura E. Hubbard, Christopher James Kotalik, Dana W. Kolpin, David M. Walters, Jennifer L. Tank, Gary A. Lamberti

PFAS mixture composition and internal exposure profiles shape biological responses under field-realistic exposure PFAS mixture composition and internal exposure profiles shape biological responses under field-realistic exposure

Per- and polyfluoroalkyl substances (PFAS) occur as complex mixtures, yet mixture-dependent biological effects under environmentally realistic exposure conditions remain poorly understood. We conducted multiyear (2018, 2019, 2021) continuous-flow, field-based exposures of male fathead minnows (Pimephales promelas) using a low-PFAS reference well (REF; sum of measured PFAS (∑PFAS) 0.1–0.2...
Authors
Alan M. Vajda, Jill Jenkins, David Bertolatus, Denis R. LeBlanc, Christopher J. Martyniuk, Zachary Ryan Hopkins, Andrea K. Tokranov, A. R. Dethloff, Joseph C. Tucker, Rainer Lohmann, Larry B. Barber

PFAS remediation in a bioelectrochemical system inoculated with the west branch consortium (WBC-2) PFAS remediation in a bioelectrochemical system inoculated with the west branch consortium (WBC-2)

Groundwater contamination by per- and polyfluoroalkyl substances (PFAS) poses a persistent environmental and public health concern. This study evaluates a two-chambered bioelectrochemical system (BES) inoculated with the West Branch Consortium (WBC-2) for PFAS remediation. Under an applied cathodic potential of −450 mV (versus Ag/AgCl), the BES with active WBC-2 achieved >99.0%...
Authors
Haoran Yang, Michelle M. Lorah, Kelly S. Bender, Chunjie Xia, Jiasi Sun, Jia Liu

Phylogenomic analyses reveal introgression and cryptic speciation in the globally distributed, vector-transmitted pathogen Plasmodium relictum Phylogenomic analyses reveal introgression and cryptic speciation in the globally distributed, vector-transmitted pathogen Plasmodium relictum

Establishing species limits is challenging, particularly for pathogens of wildlife. These pathogens can be difficult to sample and culture, and their genome sequencing must often be conducted in the presence of high levels of host DNA. Plasmodium relictum is a mosquito-vectored avian malaria pathogen that is a globally distributed host generalist, comprised of several genetic lineages...
Authors
Esther Weyer, Angela N. Theodosopoulos, Vaidas Palinauskas, Staffan Bensch, Helena Westerdahl, Melanie Duc, Arif Ciloglu, Xi Huang, Kyeong Soon Kim, Yoshio Tsuda, Carter T. Atkinson, Pavel Zehtindjiev, Robert C. Fleischer, Nichelle M. VanTassel, Scott A. Taylor, Olof Hellgren, Vincenzo A. Ellis

Physiological impacts of sublethal Cyathocotyle bushiensis and Sphaeridiotrema pseudoglobulus infections in captive Lesser Scaup (Aythya affinis) Physiological impacts of sublethal Cyathocotyle bushiensis and Sphaeridiotrema pseudoglobulus infections in captive Lesser Scaup (Aythya affinis)

Thousands of Lesser Scaup (Aythya affinis) die annually in the Upper Mississippi River System, USA, from intestinal infections after birds consume exotic faucet snails, Bithynia tentaculata, infected with introduced parasites, Cyathocotyle bushiensis and Sphaeridiotrema pseudoglobulus. To date, the low frequency (biannual) and magnitude of mortality events from intestinal infections...
Authors
C.R Beach, Auriel Fournier, Joseph D. Lancaster, Douglas C. Osborne, Rebecca A. Cole, Heath M. Hagy, Christopher N. Jacques

Phytoplankton responses to experimental nitrogen and phosphorus loading in the eutrophic and colored Caloosahatchee River, Florida Phytoplankton responses to experimental nitrogen and phosphorus loading in the eutrophic and colored Caloosahatchee River, Florida

The Caloosahatchee River, located in southwest Florida, is a eutrophic and colored river that flows from Lake Okeechobee westward into its estuary and the Gulf of America. Cyanobacterial harmful algal blooms (HABs) are a documented problem along this freshwater-to-marine waterway where nutrient enrichment has been identified as a key factor in bloom occurrence but has not been...
Authors
Viviana Mazzei, Keith A. Loftin, Emily Karwacki, Jose V. Lopez, Lauren E. Krausfeldt, Barry H. Rosen, Hidetoshi Urakawa

Plant diversity shifts with drying and wetting cycles following removal of poplar plantations in Dongting Lake, China Plant diversity shifts with drying and wetting cycles following removal of poplar plantations in Dongting Lake, China

Dongting Lake, the second largest lake in China, plays a crucial role in maintaining regional ecological security by providing key habitats for waterbirds. This study examined how hydrology and topography (ditches and mounds) together generate fine-scale wet–dry gradients that shape species establishment and successional trajectories. Over the past decade, vegetation restoration has been
Authors
Xueer Ma, Chenchen Liu, Lingli Peng, Chengzhu Liu, Beth A. Middleton, Ting Lei

Plasticity in the reproductive biology of Yellowstone cutthroat trout Oncorhynchus virginalis bouvieri in Yellowstone Lake following lake trout Salvelinus namaycush invasion Plasticity in the reproductive biology of Yellowstone cutthroat trout Oncorhynchus virginalis bouvieri in Yellowstone Lake following lake trout Salvelinus namaycush invasion

Yellowstone cutthroat trout Oncorhynchus virginalis bouvieri in Yellowstone Lake are the focus of intensive conservation efforts due to the threat of predation by invasive lake trout Salvelinus namaycush. Suppression gillnetting has reduced the abundance of predatory lake trout, and the Yellowstone cutthroat trout population is recovering. Long-term monitoring indicates the size...
Authors
Michelle A. Briggs, Molly A. Webb, Christopher S. Guy, Todd M. Koel
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