Publications
Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
Mission Area Publications
Mission Area Publications
We are focused on some of the most significant issues society faces, and our science is making a substantial contribution to the well-being of the Nation and the world. Learn more about the major topics our research covers and the programs focused on those topics.
Filter Total Items: 74207
Comparison of sediment and water column nutrient processing rates in agricultural streams of contrasting buffer land use
Watershed nutrient management often focuses on actions that reduce the movement of nitrogen (N) and phosphorus (P) from agricultural lands into streams. One area of management focus is the buffer of land adjacent to streams. Wetlands and forests in this buffer can intercept and retain N and P from the landscape. In addition to directly intercepting agricultural nutrients, natural habitats in the b
Authors
James H. Larson, Sean Bailey, Rebecca Kreiling, Lynn A. Bartsch, Paul C. Frost, Marguerite A. Xenopoulos, Nolan J.T. Pearce, Mary Anne Evans
Evaluation and refinement of chlorophyll-a algorithms for high-biomass blooms in San Francisco Bay (USA)
A massive bloom of the raphidophyte Heterosigma akashiwo occurred in summer 2022 in San Francisco Bay, causing widespread ecological impacts including events of low dissolved oxygen and mass fish kills. The rapidly evolving bloom required equally rapid management response, leading to the use of near-real-time image analysis of chlorophyll from the Ocean and Land Colour Instrument (OLCI) aboard Sen
Authors
Raphael M. Kudela, David B. Senn, Emily T. Richardson, Keith Bouma-Gregson, Brian A. Bergamaschi, Lawrence Sim
All tidal wetlands are blue carbon ecosystems
Managing coastal wetlands is one of the most promising activities to reduce atmospheric greenhouse gases, and it also contributes to meeting the United Nations Sustainable Development Goals. One of the options is through blue carbon projects, in which mangroves, saltmarshes, and seagrass are managed to increase carbon sequestration and reduce greenhouse gas emissions. However, other tidal wetlands
Authors
Maria Fernanda Adame, Jeffrey Kelleway, Ken Krauss, Catherine E. Lovelock, Janine B. Adams, Stacey M. Trevathan-Tackett, Gregory B. Noe, Luke Jeffrey, Mike Ronan, Maria Zann, Paul E. Carnell, Naima Iram, Damien T. Maher, Daniel Murdiyarso, Sigit D. Sasmito, Da B. Tran, Paul Dargusch, J. Boone Kauffman, Laura S. Brophy
Multiple stressors mediate the effects of warming on leaf decomposition in a large regulated river
Predicting how increasing temperatures interact with other global change drivers to influence the structure and dynamics of Earth's ecosystems is a primary challenge in ecology. Our study made use of multiple simultaneous “natural experiments” to examine how rapid warming, declining nutrients, invasive consumers, and riparian invasive species management interact to influence leaf decomposition in
Authors
Eric Arthur Scholl, Kyle R. Hanus, Tyler Gardner, Theodore Kennedy
Distinct yet adjacent earthquake sequences near the Mendocino Triple Junction: 20 December 2021 Mw 6.1 and 6.0 Petrolia, and 20 December 2022 Mw 6.4 Ferndale
Two earthquake sequences occurred a year apart at the Mendocino Triple Junction in northern California: first the 20 December 2021 �w 6.1 and 6.0 Petrolia sequence, then the 20 December 2022 �w 6.4 Ferndale sequence. To delineate active faults and understand the relationship between these sequences, we applied an automated deep‐learning workflow to create enhanced and relocated earthquake catalogs
Authors
Clara Yoon, David R. Shelly
Analysis of mitochondrial DNA sequence data demonstrates that monophyly of myotis occultus is complicated by greater sampling of myotis lucifugus
The validity of Myotis occultus as a species unique from Myotis lucifugus has been a source of debate. Most recently, many authorities treat M. occultus as a distinct species, at least in part because a previous study showed that M. occultus and M. l. carissima (the subspecies that occurs in closest geographic proximity to M. occultus) form separate monophyletic clades based on sequences of two mi
Authors
Jeffrey M. Lorch, Antoinette J. Piaggio, Daniel R. Taylor
New diagnostic assessment of MCMC algorithm effectiveness, efficiency, reliability, and controllability
Markov Chain Monte Carlo (MCMC) is a robust statistical approach for estimating posterior distributions. However, the significant computational cost associated with MCMC presents a considerable challenge, complicating the selection of an appropriate algorithm tailored to the specific problem at hand. This study introduces a novel and comprehensive framework for evaluating the performance of MCMC a
Authors
Hossein KavianiHamedani, Julianne D. Quinn, Jared David Smith
Data-driven adjustments for combined use of NGA-East hard-rock ground motion and site amplification models
Model development in the Next Generation Attenuation-East (NGA-East) project included two components developed concurrently and independently: (1) earthquake ground-motion models (GMMs) that predict the median and aleatory variability of various intensity measures conditioned on magnitude and distance, derived for a reference hard-rock site condition with an average shear-wave velocity in the uppe
Authors
Maria E. Ramos-Sepulveda, Jonathan P. Stewart, Grace Alexandra Parker, Morgan P. Moschetti, Eric M. Thompson, Scott J. Brandenberg, Youssef M A Hashash, Ellen M. Rathje
Vulnerability to sea-level rise varies among estuaries and habitat types: Lessons learned from a network of surface elevation tables in Puget Sound
Estuarine systems that provide valuable ecosystem services to society and important foraging and rearing habitat for fish and wildlife species continue to undergo degradation. In Puget Sound, WA, as much as 70–80% of historic estuarine habitat has been lost to anthropogenic development, and continued losses are expected through the end of the twenty-first century due to rising sea levels. To evalu
Authors
Melanie J. Davis, Katrina L. Poppe, John M. Rybczyk, Eric E. Grossman, Isa Woo, Joshua W. Chamberlin, Michelle Totman, Todd Zackey, Frank Leonetti, Suzanne Shull, Susan E. W. De La Cruz
Snow-cover remote sensing of conifer tree recovery in high-severity burn patches
The number of large, high-severity wildfires has been increasing across the western United States over the last several decades. It is not fully understood how changes in the frequency of large, severe wildfires may impact the resilience of conifer forests, due to alterations in regeneration success or failure. Our research investigates 30 years of conifer recovery patterns within 34 high-severity
Authors
Casey Menick, Wade T. Tinkham, Chad Hoffman, Melanie K. Vanderhoof, Jody C. Vogeler
Shift in piscivory by salmonids following invasion of a minnow in an oligotrophic reservoir
Predation can play an important role in structuring ecological communities, and predator–prey dynamics can be altered following the introduction of new species. An unauthorized introduction of redside shiner (Richardsonius balteatus) into reservoirs in the Upper Skagit River, Washington, USA created concern that a consequent shift in predator–prey dynamics in the reservoirs could reduce recruitmen
Authors
Rachelle Carina Johnson, Marshal Hoy, Karl D. Stenberg, Jonathan H Mclean, Benjamin Lorenz Jensen, Tessa Julianne Code, Carl Ostberg, David Beauchamp
Yosemite toad (Anaxyrus canorus) transcriptome reveals interplay between speciation genes and adaptive introgression
Genomes are heterogeneous during the early stages of speciation, with small ‘islands’ of DNA appearing to reflect strong adaptive differences, surrounded by vast seas of relative homogeneity. As species diverge, secondary contact zones between them can act as an interface and selectively filter through advantageous alleles of hybrid origin. Such introgression is another important adaptive process,
Authors
Paul A. Maier, A. G. Vandergast, Andrew J. Bohonak