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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175619

Breeding by western Yellow-billed Cuckoos in xeroriparian habitat in southeastern Arizona Breeding by western Yellow-billed Cuckoos in xeroriparian habitat in southeastern Arizona

The identification of occupied habitat is an important component of recovery efforts for threatened and endangered species. The western population of the Yellow-billed Cuckoo (Coccyzus americanus), federally listed as a threatened distinct population segment, has long been considered a riparian-obligate, yet recent survey efforts in southeastern Arizona have documented cuckoos occurring...
Authors
Nicholas D. Beauregard, Tad C. Theimer, Charles A. Drost, Susan J. Sferra

A dataset of two-dimensional XBeach model set-up files for northern California A dataset of two-dimensional XBeach model set-up files for northern California

Here, we describe a dataset of two-dimensional (2D) XBeach model files that were developed for the Coastal Storm Modeling System (CoSMoS) in northern California as an update to an earlier CoSMoS implementation that relied on one-dimensional (1D) modeling methods. We provide details on the data and their application, such that they might be useful to end-users for other coastal studies...
Authors
Andrea C. O'Neill, Cornelis M. Nederhoff, Li H. Erikson, Jennifer Anne Thomas, Patrick L. Barnard

Contemporary fires are less frequent but more severe in dry conifer forests of the southwestern United States Contemporary fires are less frequent but more severe in dry conifer forests of the southwestern United States

Wildfires in the southwestern United States are increasingly frequent and severe, but whether these trends exceed historical norms remains contested. Here we combine dendroecological records, satellite-derived burn severity, and field measured tree mortality to compare historical (1700-1880) and contemporary (1985-2020) fire regimes at tree-ring fire-scar sites in Arizona and New Mexico...
Authors
E. McClure, J.D. Cooper, C. Guiterman, Ellis Q. Margolis, S. Parks

Multiscale processes drive formation of logjam habitats and use by juvenile Chinook salmon across a boreal stream network in Alaska Multiscale processes drive formation of logjam habitats and use by juvenile Chinook salmon across a boreal stream network in Alaska

Boreal forest streams are characterized by large volumes of instream wood, yet the relationship between logjams and Pacific salmon productivity remains underqualified. We located logjams (n = 427) within the distribution of Chinook salmon (Oncorhynchus tshawytscha) in the Chena River, Alaska (Yukon River tributary) and measured dimensions, classified formative process, and snorkel...
Authors
Charles N. Cathcart, Jeffrey A. Falke, Jimmy Fox, Robert Henszey, Katherine Lininger

Associations between Ornithodoros spp. ticks and Mojave Desert Tortoises (Gopherus agassizii) obtained from health assessment documents Associations between Ornithodoros spp. ticks and Mojave Desert Tortoises (Gopherus agassizii) obtained from health assessment documents

Soft ticks in the genus Ornithodoros occur throughout the Mojave Desert in southern Nevada, southeastern California, and parts of southwestern Utah and northwestern Arizona, USA, and are frequently observed parasitizing Mojave desert tortoises (Gopherus agassizii). However, limited research exists examining the relationship between ticks and desert tortoises. Mojave desert tortoises are...
Authors
Molly J. Bechtel, Jeffrey T. Foster, Todd Esque, Nathan C. Nieto, Kristina Drake, Mike B. Teglas

Perspectives on the future of ecology, evolution, and biodiversity from the Council on Microbial Sciences of the American Society for Microbiology Perspectives on the future of ecology, evolution, and biodiversity from the Council on Microbial Sciences of the American Society for Microbiology

The field of microbial ecology, evolution, and biodiversity (EEB) is at the leading edge of understanding how microbes shape our biosphere and influence the well-being of humankind. To that end, EEB is developing new tools to analyze the massive, complex, transdisciplinary datasets that result from such studies. The American Society for Microbiology’s Council on Microbial Sciences hosted...
Authors
Denise M. Akob, A. Elizabeth Oates, Peter R. Girguis, Brian Badgley, Vaughn Cooper, Rachel Poretsky, Braden T. Tierney, Elena Litchman, Rachel J. Whitaker, Katrine L. Whiteson, C. Jessica E. Metcalf, Ecology Evolutionary and Biodiversity Retreat Participants

Phenology forecasting models for detection and management of invasive annual grasses Phenology forecasting models for detection and management of invasive annual grasses

Non-native annual grasses can dramatically alter fire frequency and reduce forage quality and biodiversity in the ecosystems they invade. Effective management techniques are needed to reduce these undesirable invasive species and maintain ecosystem services. Well-timed management strategies, such as grazing, that are applied when invasive grasses are active prior to native plants can...
Authors
Janet S. Prevey, Ian S. Pearse, Dana M. Blumenthal, Armin J. Howell, Julie A. Kray, Sasha C. Reed, Mitchell B. Stephenson, Catherine S. Jarnevich

Linking resource selection to population performance spatially to identify species' habitat across broad scales: An example of greater sage-grouse in a distinct population segment Linking resource selection to population performance spatially to identify species' habitat across broad scales: An example of greater sage-grouse in a distinct population segment

Management decisions often focus on the habitat selection of marked individuals without considering the contribution to demographic performance in selected habitats. Because habitat selection is not always adaptive, understanding the spatial relationship between habitat selection and demographic performance is critical to management decisions. Mapping both habitat selection and...
Authors
Megan C. Milligan, Peter S. Coates, Brianne E. Brussee, Shawn T. O’Neil, Steven R. Mathews, Shawn P. Espinosa, Katherine Miller, Daniel A. Skalos, Lief A. Wiechman, Steve Abele, John Boone, Kristie Boatner, Heather Stone, Michael L. Casazza

State of science, gap analysis, and prioritization for southeastern United States water-quality impacts from coastal storms—Fiscal year 2023 program report to the Water Resources Mission Area from the Water Availability Impacts of Extreme Events Program—H State of science, gap analysis, and prioritization for southeastern United States water-quality impacts from coastal storms—Fiscal year 2023 program report to the Water Resources Mission Area from the Water Availability Impacts of Extreme Events Program—H

Tropical cyclones (coastal storm events that include tropical depressions, tropical storms, and hurricanes) cause landscape-scale disturbances that can lead to impaired water quality and thus reduce water availability for use. Stakeholders and scientists at local and national scales have illustrated a need for understanding these risks to water quality. A regional and comprehensive...
Authors
Lisamarie Windham-Myers, Tara L. Root, Matthew D. Petkewich, MaryLynn Musgrove, Amy C. Gill, J. Curtis Weaver, Christopher H. Conaway, Bruce D. Lindsey, Francis Parchaso, Noah Knowles, Elizabeth J. Tomaszewski

Hyperspectral Image Transects during Transient Events in Rivers (HITTER): Framework development and application to a tracer experiment on the Missouri River, USA Hyperspectral Image Transects during Transient Events in Rivers (HITTER): Framework development and application to a tracer experiment on the Missouri River, USA

Rivers convey a broad range of materials, such as sediment, nutrients, and contaminants. Much of this transport can occur during or immediately after an episodic, pulsed event like a flood or an oil spill. Understanding the flow processes that influence the motion of these substances is important for managing water resources and conserving aquatic ecosystems. This study introduces a new...
Authors
Carl J. Legleiter, Victoria Mary Scholl, Brandon James Sansom, Matthew Alexander Burgess

Quantification of threats to bats at localized spatial scales for conservation and management Quantification of threats to bats at localized spatial scales for conservation and management

In a rapidly changing world, where species conservation needs vary by local habitat, concentrated conservation efforts at small spatial scales can be critical. Bats provide an array of value to the ecosystems they inhabit; many bat species are also of conservation concern. San Diego County, California, contains 22 of the 41 bat species that occur in the United States, 16 of which are on
Authors
Brian M. Myers, Drew Stokes, Kristine L. Preston, Robert N. Fisher, Amy G. Vandergast

Continental-scale nutrient and contaminant delivery by Pacific salmon Continental-scale nutrient and contaminant delivery by Pacific salmon

The movement of large amounts of nutrients by migrating animals has ecological benefits for recipient food webs1,2 that may be offset by co-transported contaminants3,4. Salmon spawning migrations are archetypal of this process, carrying marine-derived materials to inland ecosystems where they stimulate local productivity but also enhance contaminant exposure5,6,7. Pacific salmon...
Authors
Jessica E. Brandt, Jeff S. Wesner, Gregory T. Ruggerone, Timothy D. Jardine, Collin A. Eagles-Smith, Gabrielle E. Ruso, Craig A. Stricker, Cristofor A. Voss, David Walters
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