Publications
Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
Mission Area Publications
Mission Area Publications
We are focused on some of the most significant issues society faces, and our science is making a substantial contribution to the well-being of the Nation and the world. Learn more about the major topics our research covers and the programs focused on those topics.
Filter Total Items: 175573
Prion seeding activity in plant tissues detected by RT-QuIC Prion seeding activity in plant tissues detected by RT-QuIC
Prion diseases such as scrapie, bovine spongiform encephalopathy (BSE), and chronic wasting disease (CWD) affect domesticated and wild herbivorous mammals. Animals afflicted with CWD, the transmissible spongiform encephalopathy of cervids (deer, elk, and moose), shed prions into the environment, where they may persist and remain infectious for years. These environmental prions may remain...
Authors
Kate Burgener, Stuart Siegfried Lichtenberg, Daniel P. Walsh, Heather Inzalaco, Aaron Lomax, Joel Pedersen
Viral pathogen detection in U.S. game-farm mallard (Anas platyrhynchos) flags spillover risk to wild birds Viral pathogen detection in U.S. game-farm mallard (Anas platyrhynchos) flags spillover risk to wild birds
The threat posed by emerging infectious diseases is a major concern for global public health, animal health and food security, and the role of birds in transmission is increasingly under scrutiny. Each year, millions of mass-reared game-farm birds are released into the wild, presenting a unique and a poorly understood risk to wild and susceptible bird populations, and to human health. In
Authors
Brian P. Bourke, Robert J. Dusek, Koray Ergunay, Yvonne-Marie Linton, Sergei V. Drovetski
Behavioral trade-offs and multitasking by elk in relation to predation risk from Mexican gray wolves Behavioral trade-offs and multitasking by elk in relation to predation risk from Mexican gray wolves
Predator non-consumptive effects (NCE) can alter prey foraging time and habitat use, potentially reducing fitness. Prey can mitigate NCEs by increasing vigilance, chewing-vigilance synchronization, and spatiotemporal avoidance of predators. We quantified the relationship between Mexican wolf (Canis lupus baileyi) predation risk and elk (Cervus canadensis) behavior. We conducted...
Authors
Zachary J. Farley, Cara J. Thompson, Scott T. Boyle, Nicole M. Tatman, James W. Cain
Melded integrated population models Melded integrated population models
Integrated population models provide a framework for assimilating multiple datasets to understand population dynamics. Understanding drivers of demography is key to improving wildlife management, and integrated population models have informed conservation practices for many species of conservation concern. Motivated by multiple surveys of lesser prairie-chicken (Tympanuchus...
Authors
Justin J. Van Ee, Christian A. Hagen, David C. Pavlacky, David A. Haukos, Andrew J . Lawrence, Ashley M Tanner, Blake A. Grisham, Kent A. Fricke, Liza G. Rossi, Grant M. Beauprez, Kurt E. Kuklinski, Russell Martin, Matthew D. Koslovsky, Troy B. Rintz, Mevin B. Hooten
Effects of drought and cloud-water interception on groundwater recharge and wildfire hazard for recent and future climate conditions, Kauaʻi, Oʻahu, Molokaʻi, Maui, and the Island of Hawaiʻi Effects of drought and cloud-water interception on groundwater recharge and wildfire hazard for recent and future climate conditions, Kauaʻi, Oʻahu, Molokaʻi, Maui, and the Island of Hawaiʻi
The Water-budget Accounting for Tropical Regions Model (WATRMod) code was used for Kauaʻi, Oʻahu, Molokaʻi, Maui, and the Island of Hawaiʻi to estimate the spatial distribution of groundwater recharge, soil moisture, evapotranspiration, and climatic water deficit for a set of water-budget scenarios. The scenarios included historical and future drought conditions, and a land-cover...
Authors
Alan Mair, Delwyn S. Oki, Heidi L. Kane, Adam G. Johnson, Kolja Rotzoll
Impact of Hurricane Irma on coral reef sediment redistribution at Looe Key Reef, Florida, USA Impact of Hurricane Irma on coral reef sediment redistribution at Looe Key Reef, Florida, USA
Understanding event-driven sediment transport in coral reef environments is essential to assessing impacts on reef species, habitats, restoration, and mitigation, yet a global knowledge gap remains due to limited quantitative studies. Hurricane Irma made landfall in the Lower Florida Keys with sustained 209 km h−1 winds and waves greater than 8 m on 10 September 2017, directly impacting...
Authors
Kimberly Yates, Zachery Fehr, Selena Anne-Marie Johnson, David G. Zawada
Estimated groundwater recharge for mid-century and end-of-century climate projections, Kaua‘i, O‘ahu, Moloka‘i, Lāna‘i, Maui, and the Island of Hawai‘i Estimated groundwater recharge for mid-century and end-of-century climate projections, Kaua‘i, O‘ahu, Moloka‘i, Lāna‘i, Maui, and the Island of Hawai‘i
Demand for freshwater in the State of Hawaiʻi is expected to increase by roughly 13 percent from 2020 to 2035. Groundwater availability in Hawaiʻi is affected by a number of factors, including land cover, rainfall, runoff, evapotranspiration, and climate change. To evaluate the availability of fresh groundwater under projected future-climate conditions, estimates of groundwater recharge...
Authors
Heidi L. Kane, Alan Mair, Adam G. Johnson, Kolja Rotzoll, James Mifflin, Delwyn S. Oki
Best practices for genetic and genomic data archiving Best practices for genetic and genomic data archiving
Genetic and genomic data are collected for a vast array of scientific and applied purposes. Despite mandates for public archiving, data are typically used only by the generating authors. The reuse of genetic and genomic datasets remains uncommon because it is difficult, if not impossible, due to non-standard archiving practices and lack of contextual metadata. But as the new field of...
Authors
Deborah M. Leigh, Amy G. Vandergast, Margaret Hunter, Eric D. Crandall, W. Chris Funk, Colin J Garroway, Sean M. Hoban, Sara J. Oyler-McCance, Christian Rellstab, Gernot Segelbacher, Chloe Schmidt, Ella Vazquez-Dominguez, Ivan Paz-Vinas
Structural heterogeneity predicts ecological resistance and resilience to wildfire in arid shrublands Structural heterogeneity predicts ecological resistance and resilience to wildfire in arid shrublands
Context Dynamic feedbacks between physical structure and ecological function drive ecosystem productivity, resilience, and biodiversity maintenance. Detailed maps of canopy structure enable comprehensive evaluations of structure–function relationships. However, these relationships are scale-dependent, and identifying relevant spatial scales to link structure to function remains...
Authors
Andrii Zaiats, Megan E Cattau, David S. Pilliod, Rongsong Liu, Patricia Kaye T. Dumandan, Ahmad Hojatimalekshah, Donna M. Delparte, Trevor Caughlin
Reframing wildlife disease management problems with decision analysis Reframing wildlife disease management problems with decision analysis
Contemporary wildlife disease management is complex because managers need to respond to a wide range of stakeholders, multiple uncertainties, and difficult trade-offs that characterize the interconnected challenges of today. Despite general acknowledgment of these complexities, managing wildlife disease tends to be framed as a scientific problem, in which the major challenge is lack of...
Authors
Margaret McEachran, Johanna A. Harvey, Riley Olivia Mummah, Molly Bletz, Claire S. Teitelbaum, Elias Rosenblatt, F. Javiera Rudolph, Fernando Arce, Shanglai Yin, Diann Prosser, Brittany A. Mosher, Jennifer M. Mullinax, Graziella Vittoria DiRenzo, Jannelle Couret, Michael C. Runge, Evan H. Campbell Grant, Jonathan D. Cook
Testing megathrust rupture models using tsunami deposits Testing megathrust rupture models using tsunami deposits
The 26 January 1700 CE Cascadia subduction zone earthquake ruptured much of the plate boundary and generated a tsunami that deposited sand in coastal marshes from northern California to Vancouver Island. Although the depositional record of tsunami inundation is extensive in some of these marshes, few sites have been investigated in enough detail to map the inland extent of sand...
Authors
SeanPaul La Selle, Alan R. Nelson, Robert C. Witter, Bruce E. Jaffe, Guy Gelfenbaum, Jason Scott Padgett
Development of a hydrogeologic visualization model for western Sarpy County, Nebraska Development of a hydrogeologic visualization model for western Sarpy County, Nebraska
Population in western Sarpy County, Nebraska, has steadily increased over the last several decades and has led to increased groundwater use for domestic purposes. To meet the increase in demand, the Papio-Missouri River Natural Resources District is seeking to use all available sources of groundwater in western Sarpy County. Additionally, elevated groundwater nitrate plus nitrite as...
Authors
Nathaniel J. Schaepe, Mikaela L. Cherry, Amanda T. Flynn, Christopher M. Hobza