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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 174960

A global ecological signal of extinction risk in marine ray-finned fishes (class Actinopterygii) A global ecological signal of extinction risk in marine ray-finned fishes (class Actinopterygii)

Many marine fish species are experiencing population declines, but their extinction risk profiles are largely understudied in comparison to their terrestrial vertebrate counterparts. Selective extinction of marine fish species may result in rapid alteration of the structure and function of ocean ecosystems. In this study, we compiled an ecological trait dataset for 8,185 species of...
Authors
Trevor M. Bak, Richard J. Camp, Noel A. Heim, Douglas J. McCauley, Jonathan L. Payne, Matthew L Knope

Assessing the ecological risk of heavy metal sediment contamination from Port Everglades Florida USA Assessing the ecological risk of heavy metal sediment contamination from Port Everglades Florida USA

Port sediments are often contaminated with metals and organic compounds from anthropogenic sources. Remobilization of sediment during a planned expansion of Port Everglades near Fort Lauderdale, Florida (USA) has the potential to harm adjacent benthic communities, including coral reefs. Twelve sediment cores were collected from four Port Everglades sites and a control site; surface...
Authors
Dimitrios G. Giarikos, Laura White, Andre Daniels, Radleigh G. Santos, Paul E. Baldauf, Amy C. Hirons

Data mining reveals tissue-specific expression and host lineage-associated forms of Apis mellifera filamentous virus Data mining reveals tissue-specific expression and host lineage-associated forms of Apis mellifera filamentous virus

Apis mellifera filamentous virus (AmFV) is a large double-stranded DNA virus of uncertain phylogenetic position that infects honey bees (Apis mellifera). Little is known about AmFV evolution or molecular aspects of infection. Accurate annotation of open-reading frames (ORFs) is challenged by weak homology to other known viruses. This study was undertaken to evaluate ORFs (including...
Authors
Robert S. Cornman

Living on the edge: Predicting songbird response to management and environmental changes across an ecotone Living on the edge: Predicting songbird response to management and environmental changes across an ecotone

Effective wildlife management requires robust information regarding population status, habitat requirements, and likely responses to changing resource conditions. Single-species management may inadequately conserve communities and result in undesired effects to non-target species. Thus, management can benefit from understanding habitat relationships for multiple species. Pinyon pine and...
Authors
Nicholas J. Van Lanen, Adrian P. Monroe, Cameron L. Aldridge

Determination and prediction of micro scale rare earth element geochemical associations in mine drainage treatment wastes Determination and prediction of micro scale rare earth element geochemical associations in mine drainage treatment wastes

Acid mine drainage (AMD) has been proposed as a novel source of rare earth elements (REE), a group of elements that includes critical metals for clean energy and modern technologies. REE are sequestered in the Fe–Al–Mn-rich precipitates produced during the treatment of AMD. These AMD solids are typically managed as waste but could be a REE source. Here, results from AMD solids...
Authors
Benjamin C. Hedin, Mengling Y. Stuckman, Charles A. Cravotta, Christina L. Lopano, Rosemary C. Capo

Reimagining standardization and geospatial interoperability in today’s GeoAI culture Reimagining standardization and geospatial interoperability in today’s GeoAI culture

Integrating Geospatial Artificial Intelligence (GeoAI) into our technological landscape has revolutionized our capacity to understand and engage with the world. However, the burgeoning adoption of GeoAI applications has underscored the imperative of data, format, and conveyance standardization and enhancing geospatial interoperability. This vision paper delves into the intricacies of the...
Authors
Samantha Arundel, Wenwen Li, Bryan B Campbell

Developing fluvial fish species distribution models across the conterminous United States—A framework for management and conservation Developing fluvial fish species distribution models across the conterminous United States—A framework for management and conservation

This report explains the steps and specific methods used to predict fluvial fish occurrences in their native ranges for the conterminous United States. In this study, boosted regression tree models predict distributions of 271 ecologically important fluvial fish species using relations between fish presence/absence and 22 natural and anthropogenic landscape variables. Models developed...
Authors
Hao Yu, Arthur R. Cooper, Jared Ross, Alexa McKerrow, Daniel J. Wieferich, Dana M. Infante

Recharge estimation approach in a data-scarce semi-arid region, Northern Ethiopian Rift Valley Recharge estimation approach in a data-scarce semi-arid region, Northern Ethiopian Rift Valley

Sustainable management of groundwater resources highly relies on the accurate estimation of recharge. However, accurate recharge estimation is a challenge, especially in data-scarce regions, as the existing models are data-intensive and require extensive parameterization. This study developed a process-based hydrologic model combining local and remotely sensed data for characterizing...
Authors
Sisay Simachew Mekonen, Scott E. Boyce, Abdella K. Mohammed, Lorraine E. Flint, Alan L Flint, Markus Disse

Carbon dioxide (CO2) gas and eDNA monitoring as tools for eradicating invasive fish from anchialine pools in Hawai‘i Carbon dioxide (CO2) gas and eDNA monitoring as tools for eradicating invasive fish from anchialine pools in Hawai‘i

Invasive fish can profoundly affect communities they invade. In Hawai‘i, invasive fishes have become established in many anchialine pools, threatening the persistence of resident invertebrates, including several endangered species. Tools to eradicate invasive fishes from these pools are lacking. This study tested the efficacy of carbon dioxide (CO2) gas diffused into anchialine pool...
Authors
Robert W. Peck, Maya Munnstermann, Malia Hayes, Carter T. Atkinson, Sallie Beavers, Aaron R. Cupp, Paul C. Banko

A combined compost, dolomite, and endophyte addition is more effective than single amendments for improving phytorestoration of metal contaminated mine tailings A combined compost, dolomite, and endophyte addition is more effective than single amendments for improving phytorestoration of metal contaminated mine tailings

Background and aims Re-vegetation of mining-impacted landscapes reduces transport of toxic elements while improving soil fertility. This study evaluated whether the planting of a native perennial grass with a consortium of diazotrophic microbial endophytes and municipal waste compost—alone and in combination—enhanced plant growth while stabilizing metal(loids) in dolomite-amended...
Authors
Courtney Creamer, Mary-Catherine Leewis, Martina Kracmarova, Jakub Papik, Sean Kacur, John Freeman, Ondrej Uhlik, Andrea L. Foster

Time-dependent weakening of granite at hydrothermal conditions Time-dependent weakening of granite at hydrothermal conditions

The evolution of a fault's frictional strength during the interseismic period is a critical component of the earthquake cycle, yet there have been relatively few studies that examine the time-dependent evolution of strength at conditions representative of seismogenic depths. Using a simulated fault in Westerly granite, we examined how frictional strength evolves under hydrothermal...
Authors
Tamara Nicole Jeppson, David A. Lockner, Nicholas M. Beeler, Diane E. Moore

Linking meso-scale spatial variation in methylmercury production to bioaccumulation in tidal marsh food webs Linking meso-scale spatial variation in methylmercury production to bioaccumulation in tidal marsh food webs

Differences in sediment biogeochemistry among tidal marsh features with different hydrological and geomorphological characteristics, including marsh interiors, marsh edges, first-order channels, and third-order channels, can result in spatial variation in MeHg production and availability. To better understand the link between MeHg production in sediments and bioaccumulation in primary...
Authors
Laurie Anne Hall, Isa Woo, Mark C. Marvin-DiPasquale, John Y. Takekawa, David P. Krabbenhoft, Donald Yee, Letitia Grenier, Susan E.W. De La Cruz
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