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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

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Survival implications of diversion entrainment for outmigrating juvenile Chinook Salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) Survival implications of diversion entrainment for outmigrating juvenile Chinook Salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss)

Efforts to ameliorate negative effects of diversion dams on aquatic species of concern are important in rivers where water withdrawal supports agricultural economies and are likely to become increasingly important with impending climate change. A multiyear study was conducted to evaluate the survival consequences of diversion dam passage for juvenile Chinook Salmon (Oncorhynchus...
Authors
Tobias J. Kock, Scott D. Evans, Russell Perry, Patrick A. Monk, Michael S. Porter, Amy C. Hansen, Adam Pope

Dams facilitate predation during Atlantic salmon (Salmo salar) smolt migration Dams facilitate predation during Atlantic salmon (Salmo salar) smolt migration

Diadromous fish populations have incurred precipitous declines across the globe. Among many stressors, these species are threatened by anthropogenic barriers that impede movement, alter riverine habitat, and augment predator communities. In this study, we used acoustic transmitters (n = 220) with predation and temperature sensors to characterize Atlantic salmon (Salmo salar) smolt...
Authors
Matthew A. Mensinger, James P. Hawkes, Graham S. Goulette, Alessio Mortelliti, Erik Blomberg, Joseph D. Zydlewski

Investigating permafrost carbon dynamics in Alaska with artificial intelligence Investigating permafrost carbon dynamics in Alaska with artificial intelligence

Positive feedbacks between permafrost degradation and the release of soil carbon into the atmosphere impact land–atmosphere interactions, disrupt the global carbon cycle, and accelerate climate change. The widespread distribution of thawing permafrost is causing a cascade of geophysical and biochemical disturbances with global impacts. Currently, few earth system models account for...
Authors
Bradley Gay, Neal Pastick, Andreas Zufle, Amanda Armstrong, Kimberly Miner, J.J. Qu

Climate change and collapsing thermal niches of desert reptiles and amphibians: Assisted migration and acclimation rescue from extirpation Climate change and collapsing thermal niches of desert reptiles and amphibians: Assisted migration and acclimation rescue from extirpation

Recent climate change should result in expansion of species to northern or high elevation range margins, and contraction at southern and low elevation margins in the northern hemisphere, because of local extirpations or range shifts or both. We combined museum occurrence records from both the continental U.S. and Mexico with a new eco-physiological model of extinction developed for...
Authors
Bary Sinervo, Rafael A. Lara Resendiz, Donald B. Miles, Jeffrey E. Lovich, Philip C. Rosen, Hector Gadsden, Gamaliel Castenada Gaytan, Patricia Galina Tessaro, Victor H. Luja, Raymond B. Huey, Amy V. Whipple, Victor Sanchez Cordero, Jason B. Rohr, Gabriel Caetano, Juan C. Santos, Sites, Fausto R. Mendez de la Cruz

Springing forward: Migrating songbirds catch up with the start of spring in North America Springing forward: Migrating songbirds catch up with the start of spring in North America

In temperate regions, the annual pattern of spring onset can be envisioned as a ‘green wave’ of emerging vegetation that moves across continents from low to high latitudes, signifying increasing food availability for consumers.Many herbivorous migrants ‘surf’ such resource waves, timing their movements to exploit peak vegetation resources in early spring. Although less well studied at...
Authors
Claire E. Nemes, Peter P. Marra, Theodore J. Zenzal, Samantha A. Collins, Bryant C. Dossman, Alexander R. Gerson, Camila Gomez, Ana M. Gonzalez, Mariamar Gutierrez Ramirez, Sarah A. Hamer, Joseph Marty, Phillip L. Vasseur, Emily B. Cohen

Environmental surveillance and detection of infectious highly pathogenic avian influenza virus in Iowa wetlands Environmental surveillance and detection of infectious highly pathogenic avian influenza virus in Iowa wetlands

Avian influenza viruses (AIVs) infect both wild birds and domestic poultry, resulting in economically costly outbreaks that have the potential to impact public health. Currently, a knowledge gap exists regarding the detection of infectious AIVs in the aquatic environment. In response to the 2021–2022 Eurasian strain highly pathogenic avian influenza (HPAI) A/goose/Guangdong/1/1996 clade...
Authors
Laura E. Hubbard, Carrie E. Givens, Erin A. Stelzer, Mary L. Killian, Dana W. Kolpin, Christine M. Szablewski, Rebecca L. Poulson

Aquatic carbon export and dynamics in mountain headwater streams of the western U.S. Aquatic carbon export and dynamics in mountain headwater streams of the western U.S.

Mountain headwater streams actively cycle carbon, receiving it from terrestrial landscapes and exporting it through downstream transport and gas exchange with the atmosphere. Although their importance is now widely recognized, aquatic carbon fluxes in headwater streams remain poorly characterized. In this study, aquatic carbon fluxes were measured in 15 mountain headwater streams and...
Authors
David W. Clow, Garrett Alexander Akie, Robert G. Striegl, Colin Penn, Graham A. Sexstone, Gabrielle L. Keith

Two new species of small-eared shrews of the Genus Cryptotis Pomel, 1848, from the Colombian Andes (Mammalia: Eulipotyphla: Soricidae) Two new species of small-eared shrews of the Genus Cryptotis Pomel, 1848, from the Colombian Andes (Mammalia: Eulipotyphla: Soricidae)

Shrews (Mammalia: Eulipotyphla: Soricidae) reach the southern limit of their New World distribution in the Andes and eastern coastal highlands of northern South America. South of Honduras, the family is represented only by species of the genus Cryptotis Pomel, 1848. In South America, soricids are restricted to moist, high-elevation environments above 1000 m, and their distribution...
Authors
Neal Woodman

Marshbird response to herbicide control of cattail in northwestern Minnesota Marshbird response to herbicide control of cattail in northwestern Minnesota

Wetlands provide essential habitat for a wide variety of wildlife species. In the once wetland-rich Prairie Pothole Region and adjacent areas of central North America, many wetlands have been converted to agricultural production. Many remaining wetlands experience ecological change via the invasion and spread of non-native plant species, such as non-native narrowleaf (Typha angustifolia)...
Authors
Nina M. Hill, Douglas H. Johnson, Thomas R. Cooper, Althea A. Archer, David E. Andersen

Assessment of post-wildfire geomorphic change in the North Fork Eagle Creek stream channel, New Mexico, 2017–21 Assessment of post-wildfire geomorphic change in the North Fork Eagle Creek stream channel, New Mexico, 2017–21

The 2012 Little Bear Fire caused substantial vegetation loss in the Eagle Creek Basin of south-central New Mexico. This loss was expected to alter the localized hydrologic response to precipitation by creating conditions that amplify surface runoff, which might alter the geomorphology of North Fork Eagle Creek, a major tributary to Eagle Creek. To monitor short-term geomorphic change...
Authors
Justin R. Nichols, Shaleene B. Chavarria, Alexander P. Graziano

Biological responses of Pacific herring embryos to crude oil are quantifiable at exposure levels below conventional limits of quantitation for PAHs in water and tissues Biological responses of Pacific herring embryos to crude oil are quantifiable at exposure levels below conventional limits of quantitation for PAHs in water and tissues

Pacific herring (Clupea pallasii), a cornerstone of marine food webs, generally spawn on marine macroalgae in shallow nearshore areas that are disproportionately at risk from oil spills. Herring embryos are also highly susceptible to toxicity from chemicals leaching from oil stranded in intertidal and subtidal zones. The water-soluble components of crude oil trigger an adverse outcome...
Authors
John P. Incardona, Tiffany L. Linbo, James R. Cameron, Barbara L. French, Jennie L. Bolton, Jacob L. Gregg, Carey E. Donald, Paul Hershberger, Nathaniel L. Scholz
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