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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 177046

Frequent transitions in mating-type locus chromosomal organization in Malassezia and early steps in sexual reproduction Frequent transitions in mating-type locus chromosomal organization in Malassezia and early steps in sexual reproduction

Fungi in the basidiomycete genus Malassezia are the most prevalent eukaryotic microbes resident on the skin of human and other warm-blooded animals and have been implicated in skin diseases and systemic disorders. Analysis of Malassezia genomes revealed that key adaptations to the skin microenvironment have a direct genomic basis, and the identification of mating/meiotic genes suggests a...
Authors
Marco A. Coelho, Giuseppe Ianiri, Marcia David-Palma, Bart Theelen, Rohit Goyal, Aswathy Narayanan, Jeffrey M. Lorch, Kaustuv Sanyal, Teun Boekhout, Joseph Heitman

Occupancy and activity patterns of nine-banded armadillos (Dasypus novemcinctus) in a suburban environment Occupancy and activity patterns of nine-banded armadillos (Dasypus novemcinctus) in a suburban environment

The geographic range of the nine-banded armadillo (Dasypus novemcinctus) has rapidly been expanding within the United States for the last 150 years. One of the factors contributing to this astounding range expansion is the species’ ability to survive in and colonize human-dominated areas. Despite the fact that armadillos live alongside humans in numerous towns and cities across the...
Authors
Brett Alexander DeGregorio, Matthew R. McElroy, Emily P. Johansson

Diving deeper into seep distribution along the Cascadia Convergent Margin, USA Diving deeper into seep distribution along the Cascadia Convergent Margin, USA

Previous margin-wide studies of methane seep distribution along the Cascadia Subduction Zone indicate peaks in seep density within the landward limit of the of gas hydrate stability zone (GHSZ; ≤500 m depth), suggesting a link between current ocean warming, acceleration of hydrate dissociated, and methane emissions. This inferred connection, however, may not account for regional geologic...
Authors
Jane Anne Rudebusch, Nancy G. Prouty, James E. Conrad, Janet Watt, Jared W. Kluesner, Jenna C. Hill, Nathaniel C. Miller, Sally J. Watson, Jess Hillman

Waterfowl show spatiotemporal trends in influenza A H5 and H7 infections but limited taxonomic variation Waterfowl show spatiotemporal trends in influenza A H5 and H7 infections but limited taxonomic variation

Influenza A viruses in wild birds pose threats to the poultry industry, wild birds, and human health under certain conditions. Of particular importance are wild waterfowl, which are the primary reservoir of low pathogenicity influenza viruses that ultimately cause high pathogenicity outbreaks in poultry farms. Despite much work on the drivers of influenza A virus prevalence, the...
Authors
Cody M. Kent, Sarah N. Bevins, Jennifer M. Mullinax, Jeffery D. Sullivan, Diann J. Prosser

Twenty-year record of salt marsh elevation dynamics in response to sea-level rise and storm-driven barrier island geomorphic processes: Fire Island, New York, USA Twenty-year record of salt marsh elevation dynamics in response to sea-level rise and storm-driven barrier island geomorphic processes: Fire Island, New York, USA

Twenty years of surface elevation table and marker horizon monitoring at three sites along the Fire Island (New York, USA) barrier island indicates that rates of marsh surface elevation change (Watch Hill, 4.4 mm year−1; Hospital Point, 3.5 mm year−1; Great Gun, − 0.3 mm year−1) were lower than the rate of monthly mean sea-level rise during the 2002–2022 monitoring period (5.1 mm year−1...
Authors
Charles T. Roman, James C. Lynch, Donald R. Cahoon

An introduction to lesions and histology of scleractinian corals An introduction to lesions and histology of scleractinian corals

Stony corals (Scleractinia) are in the Phylum Cnidaria (cnidae referring to various types of stinging cells). They may be solitary or colonial, but all secrete an external, supporting aragonite skeleton. Large, colonial members of this phylum are responsible for the accretion of coral reefs in tropical and subtropical waters that form the foundations of the most biodiverse marine...
Authors
Aine C. Hawthorn, Ilze K. Berzins, Michelle Dennis, Matti Kiupel, Alisa L. Newton, Esther C. Peters, Vicente Avila Reyes, Thierry M. Work

First observation of the ground-state electron-capture of 40K First observation of the ground-state electron-capture of 40K

Potassium-40 is a widespread, naturally occurring isotope whose radioactivity impacts estimated geological ages spanning billions of years, nuclear structure theory, and subatomic rare-event searches—including those for dark matter and neutrinoless double-beta decay. The decays of this long-lived isotope must be precisely known for its use as a geochronometer, and to account for its...
Authors
L. Hariasz, M. Stukel, P.C.F. Di Stefano, B.C. Rasco, K.P. Rykaczewski, N.T. Brewer, D.W. Stracener, Y. Liu, Z. Gai, C. Rouleau, J. B. Carter, J. Kostensalo, J. Suhonen, H. Davis, E.D. Lukosi, K.C. Goetz, R.K. Grzywacz, M. Mancuso, F. Petricca, A. Fijalkowska, M. Wolinska-Cichocka, J. Ninkovic, P. Lechner, R.B. Ickert, Leah E. Morgan, P.R. Renne, I. Yavin

Rare 40K decay with implications for fundamental physics and geochronology Rare 40K decay with implications for fundamental physics and geochronology

Potassium-40 is a widespread, naturally occurring isotope whose radioactivity impacts subatomic rare-event searches, nuclear structure theory, and estimated geological ages. A predicted electron-capture decay directly to the ground state of argon-40 has never been observed. The KDK (potassium decay) collaboration reports strong evidence of this rare decay mode. A blinded analysis reveals...
Authors
M. Stukel, L. Hariasz, P.C.F. Di Stefano, B.C. Rasco, K.P. Rykaczewski, N.T. Brewer, D.W. Stracener, Y. Liu, Z. Gai, C. Rouleau, J. B. Carter, J. Kostensalo, J. Suhonen, H. Davis, E.D. Lukosi, K.C. Goetz, R.K. Grzywacz, M. Mancuso, F. Petricca, A. Fijalkowska, M. Wolinska-Cichocka, J. Ninkovic, P. Lechner, R.B. Ickert, Leah E. Morgan, P.R. Renne, I. Yavin

Variation in herbivore space use: Comparing two savanna ecosystems with different anthrax outbreak patterns in southern Africa Variation in herbivore space use: Comparing two savanna ecosystems with different anthrax outbreak patterns in southern Africa

Background The distribution of resources can affect animal range sizes, which in turn may alter infectious disease dynamics in heterogenous environments. The risk of pathogen exposure or the spatial extent of outbreaks may vary with host range size. This study examined the range sizes of herbivorous anthrax host species in two ecosystems and relationships between spatial movement...
Authors
Yen-Hua Huang, Norman Owen-Smith, Michelle D. Henley, J. Werner Kilian, Pauline L. Kamath, Sunday O. Ochai, Henriette van Heerden, John K.E. Mfune, Wayne M. Getz, Wendy Christine Turner

Ten best practices for effective phenological research Ten best practices for effective phenological research

The number and diversity of phenological studies has increased rapidly in recent years. Innovative experiments, field studies, citizen science projects, and analyses of newly available historical data are contributing insights that advance our understanding of ecological and evolutionary responses to the environment, particularly climate change. However, many phenological data sets have
Authors
Richard Primack, Amanda S. Gallinat, Elizabeth R. Ellwood, Theresa M. Crimmins, Mark D. Schwartz, Michelle Staudinger, Abraham J. Miller-Rushing

Satellite tracking reveals use of Biscayne National Park by sea turtles tagged in multiple locations Satellite tracking reveals use of Biscayne National Park by sea turtles tagged in multiple locations

Although historical observations date back to the 1800’s, there is little information on sea turtle occupancy within Biscayne National Park (BNP). The park is located along the Florida reef tract and is dominated by the Gulfstream, which acts as a corridor for many marine animals. Here we used satellite telemetry to determine areas of use in BNP for two species of imperiled sea turtles...
Authors
Kristen Hart, Allison Benscoter, Haley M. Turner, Michael Cherkiss, Andrew Crowder, Jacquelyn C. Guzy, David Roche, Christopher R. Sasso, Glenn D. Goodwin, Derek A. Burkholder
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