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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175660

Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology

Pseudoloma neurophilia is a critical threat to the zebrafish (Danio rerio) model, as it is the most common infectious agent found in research facilities. In this study, our objectives were two-fold: (1) compare the application of diagnostic tools for P. neurophilia and (2) track the progression of infection using PCR and histology. The first experiment showed that whole-body analysis by...
Authors
Corbin J. Schuster, Taylor Kreul, Colleen E. Al-Samarrie, James T. Peterson, Justin L. Sanders, Michael L. Kent

Provenance of Devonian-Carboniferous strata of Colorado: The influence of the Cambrian and the Proterozoic Provenance of Devonian-Carboniferous strata of Colorado: The influence of the Cambrian and the Proterozoic

We report new LA-ICPMS U-Pb detrital zircon ages and sedimentary petrology of silty to sandy limestones and dolostones, as well as calcareous to dolomitic sandstones of the Devonian-Carboniferous (Mississippian) Chaffee Group, as well as detrital zircon ages from the Late Cambrian Sawatch Quartzite and a U-Pb zircon crystallization age on a late Mesoproterozoic (1087.9 13.5 Ma) granitoid...
Authors
Christopher S. Holm-Denoma, William A. Matthews, Linda Soar, Mark W. Longman, James W. Hagadorn

Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts

Monitoring is usually among the first actions taken to help inform recovery planning for declining species, but these data are rarely used formally to inform conservation decision making. For example, Central Valley Chinook salmon were once abundant, but anthropogenic activities have led to widespread habitat loss and degradation resulting in significant population declines. Monitoring...
Authors
Patti J. Wohner, Adam Duarte, John Wikert, Brad Cavallo, Steven C. Zeug, James T. Peterson

Wading bird foraging on a wetland landscape: A comparison of two strategies Wading bird foraging on a wetland landscape: A comparison of two strategies

Tactile-feeding wading birds, such as wood storks and white ibises, require high densities of prey such as small fishes and crayfish to support themselves and their offspring during the breeding season. Prey availability in wetlands is often determined by seasonal hydrologic pulsing, such as in the subtropical Everglades, where spatial distributions of prey can vary through time...
Authors
Hyo Won Lee, Donald L. DeAngelis, Simeon Yurek, Stephen Tennenbaum

Beyond glacier-wide mass balances: Parsing seasonal elevation change into spatially resolved patterns of accumulation and ablation at Wolverine Glacier, Alaska Beyond glacier-wide mass balances: Parsing seasonal elevation change into spatially resolved patterns of accumulation and ablation at Wolverine Glacier, Alaska

We present spatially distributed seasonal and annual surface mass balances of Wolverine Glacier, Alaska, from 2016 to 2020. Our approach accounts for the effects of ice emergence and firn compaction on surface elevation changes to resolve the spatial patterns in mass balance at 10 m scale. We present and compare three methods for estimating emergence velocities. Firn compaction was...
Authors
Lucas Zeller, Daniel McGrath, Louis C. Sass, Shad O'Neel, Christopher J. McNeil, Emily Baker

The 180-km-long Meers-Willow Fault System in the Southern Oklahoma Aulacogen: A potential U.S. mid-continent seismic hazard The 180-km-long Meers-Willow Fault System in the Southern Oklahoma Aulacogen: A potential U.S. mid-continent seismic hazard

We integrate new high-resolution aeromagnetic data with seismic reflection data, well logs, satellite remote sensing, and field observations to provide a regional view of buried and exposed structures in the Southern Oklahoma Aulacogen and to assess their potential for future seismicity. Trends ranging from NW−SE to ∼E−W, peaking at 330° ± 4.5° and 280° ± 3°, dominate the magnetic...
Authors
Brandon F. Chase, Folarin Kolawole, Estella A. Atekwana, Brett M. Carpenter, Molly Turko, Mohamed Abdelsalam, Carol A. Finn

Integrative monitoring strategy for marine and freshwater harmful algal blooms and toxins across the freshwater-to-marine continuum Integrative monitoring strategy for marine and freshwater harmful algal blooms and toxins across the freshwater-to-marine continuum

Many coastal states throughout the USA have observed negative effects in marine and estuarine environments caused by cyanotoxins produced in inland waterbodies that were transported downstream or produced in the estuaries. Estuaries and other downstream receiving waters now face the dual risk of impacts from harmful algal blooms (HABs) that occur in the coastal ocean as well as those...
Authors
Meredith D. A. Howard, Jayme Smith, David A. Caron, Raphael Kudela, Keith A. Loftin, Kendra Hayashi, Rich Fadness, Susan Fricke, Jacob Kann, Miranda Roethler, A.O. Tatters, Susanna Theroux

Satellite remote sensing of crop water use across the Missouri River Basin for 1986–2018 period Satellite remote sensing of crop water use across the Missouri River Basin for 1986–2018 period

Understanding historical crop water use (CWU) dynamics is important to improve land and water management. In this study, well-validated (coefficient of determination = 0.91, percent bias = 4%, and percent root mean square error = 11.8%) Landsat-based actual evapotranspiration (ETa) time-series estimations were used to (1) assess summer season CWU (CWU-Su) dynamics, (2) investigate CWU-Su...
Authors
Arun Bawa, Gabriel B. Senay, Sandeep Kumar

Informing surveillance through the characterization of outbreak potential of chronic wasting disease in white-tailed deer Informing surveillance through the characterization of outbreak potential of chronic wasting disease in white-tailed deer

Understanding the role that an environmental prion reservoir plays in the outbreak dynamics of chronic wasting disease (CWD) in free ranging white-tailed deer (Odocoileus virginianus) is critical for the allocation of disease surveillance resources by state and provincial wildlife agencies. We hypothesized that demographic, ecological, and epidemiological configurations naturally...
Authors
Brenda J. Hanley, Michelle Carstensen, Daniel P. Walsh, Sonja A. Christensen, Daniel J. Storm, James G. Boothe, Joseph Guinness, Cara E. Them, Md Sohel Ahmed, Krysten L. Schuler

Characterization of the partial oxidation products of crude oil contaminating groundwater at the U.S. Geological Survey Bemidji research site in Minnesota by elemental analysis, radiocarbon dating, nuclear magnetic resonance spectroscopy, and Fourier tran Characterization of the partial oxidation products of crude oil contaminating groundwater at the U.S. Geological Survey Bemidji research site in Minnesota by elemental analysis, radiocarbon dating, nuclear magnetic resonance spectroscopy, and Fourier tran

In oil spill research, a topic of increasing attention during the last decade has been the environmental impact of the partial oxidation products that result from transformation of the petroleum in freshwater, marine, and terrestrial ecosystems. This report describes the isolation and characterization of the partial oxidation products from crude oil contaminating groundwater at the long...
Authors
Kevin A. Thorn, Ananna Islam, Sunghwan Kim

Using microbial source tracking to identify fecal contamination sources in Great South Bay on Long Island, New York Using microbial source tracking to identify fecal contamination sources in Great South Bay on Long Island, New York

The U.S. Geological Survey worked in cooperation with the New York State Department of Environmental Conservation to assess the potential sources of fecal contamination entering a part of Great South Bay (referred to as Great South Bay for the purposes of this report) near the hamlets of West Sayville, Sayville, and Bayport on the southern shore of Suffolk County on Long Island, New York...
Authors
Tristen N. Tagliaferri, Shawn C. Fisher, Christopher M. Kephart, Natalie Cheung, Ariel P. Reed, Robert J. Welk
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