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Publications

Read publications and other informational products to learn more about USGS science occurring in the Mississippi Basin.

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Satellite remote sensing estimation of river discharge: Application to the Yukon River Alaska Satellite remote sensing estimation of river discharge: Application to the Yukon River Alaska

A methodology based on general hydraulic relations for rivers has been developed to estimate the discharge (flow rate) of rivers using satellite remote sensing observations. The estimates of discharge, flow depth, and flow velocity are derived from remotely observed water surface area, water surface slope, and water surface height, and demonstrated for two reaches of the Yukon River in...
Authors
David M. Bjerklie, Charon M. Birkett, John Jones, Claudia C. Carabajal, Jennifer Rover, John W, Fulton, Pierre-Andre Garambois

Integrating encounter theory with decision analysis to evaluate collision risk and determine optimal protection zones for wildlife Integrating encounter theory with decision analysis to evaluate collision risk and determine optimal protection zones for wildlife

1.Better understanding human‐wildlife interactions and their links with management can help improve the design of wildlife protection zones. One example is the problem of wildlife collisions with vehicles or human‐built structures (e.g. power lines, wind farms). In fact, collisions between marine wildlife and watercraft are among the major threats faced by several endangered species of...
Authors
B.J. Udell, Julien Martin, R.J. Fletcher, Mathieu Bonneau, Holly H. Edwards, T. Gowan, Stacie K. Hardy, E. Gurarie, C.S. Calleson, C.J. Deutsch

Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act

Objectively delimiting species boundaries remains an important challenge in systematics and becomes urgent when unresolved taxonomy complicates conservation and recovery efforts. We examined species boundaries in the imperiled freshwater mussel genus Cyclonaias(Bivalvia: Unionidae) using morphometrics, molecular phylogenetics, and multispecies coalescent models to help guide pending...
Authors
Nathan A. Johnson, Chase H. Smith, John M. Pfeiffer, Chalres R. Randklev, James D. Williams, James D. Austin

Identifying management-relevant research priorities for responding to disease-associated amphibian declines Identifying management-relevant research priorities for responding to disease-associated amphibian declines

A research priority can be defined as a knowledge gap that, if resolved, identifies the optimal course of conservation action. We (a group of geographically distributed and multidisciplinary research scientists) used tools from nominal group theory and decision analysis to collaboratively identify and prioritize information needs within the context of disease-associated amphibian decline...
Authors
Evan H. Campbell Grant, M. J. Adams, Robert N. Fisher, Daniel A. Grear, Brian J. Halstead, Blake R. Hossack, Erin L. Muths, Katherine L. D. Richgels, Robin E. Russell, Kelly L. Smalling, J. Hardin Waddle, Susan C. Walls, C. LeAnn White

Mapping crop residue and tillage intensity using WorldView-3 satellite shortwave infrared residue indices Mapping crop residue and tillage intensity using WorldView-3 satellite shortwave infrared residue indices

Crop residues serve many important functions in agricultural conservation including preserving soil moisture, building soil organic carbon, and preventing erosion. Percent crop residue cover on a field surface reflects the outcome of tillage intensity and crop management practices. Previous studies using proximal hyperspectral remote sensing have demonstrated accurate measurement of...
Authors
W. Dean Hively, Brian T. Lamb, Craig S. T. Daughtry, Jacob Shermeyer, Gregory W. McCarty, Miguel Quemada

Determination of representative uranium and selenium concentrations from groundwater, 2016, Homestake Mining Company Superfund site, Milan, New Mexico Determination of representative uranium and selenium concentrations from groundwater, 2016, Homestake Mining Company Superfund site, Milan, New Mexico

In 2016, the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, collected data on isotopes, age dating, and geochemistry including aqueous uranium concentrations of samples from 20 locations in the vicinity of the Homestake Mining Company Superfund site near Milan, New Mexico. The 20 sampled locations include 19 groundwater wells and 1 treatment plant...
Authors
Philip T. Harte, Johanna M. Blake, Kent Becher

Novel ecological and climatic conditions drive rapid adaptation in invasive Florida Burmese pythons Novel ecological and climatic conditions drive rapid adaptation in invasive Florida Burmese pythons

Invasive species provide powerful in situ experimental systems for studying evolution in response to selective pressures in novel habitats. While research has shown that phenotypic evolution can occur rapidly in nature, few examples exist of genome‐wide adaptation on short ‘ecological’ timescales. Burmese pythons (Python molurus bivittatus) have become a successful and impactful invasive...
Authors
Daren C. Card, Blair W. Perry, Richard H. Adams, Drew R. Schield, Acacia S. Young, Audra L. Andrew, Tereza Jezkova, Giulia Pasquesi, Nicole R. Hales, Matthew R. Walsh, Michael R. Rochford, Frank J. Mazzotti, Kristen M. Hart, Margaret Hunter, Todd A. Castoe

Potential responses of the Lower Missouri River Shovelnose Sturgeon (Scaphirhynchus platorynchus) population to a commercial fishing ban Potential responses of the Lower Missouri River Shovelnose Sturgeon (Scaphirhynchus platorynchus) population to a commercial fishing ban

We developed an age‐structured population matrix model to perform population viability analysis for Lower Missouri River (LMR) shovelnose sturgeon (Scaphirhynchus platorynchus). We investigated potential effects of the commercial fishing moratorium put in place to help protect the similar‐appearing pallid sturgeon (S. albus). The model applies different components of total variance in...
Authors
Nicholas S. Green, Mark L. Wildhaber, Janice L. Albers

Trends in nonindigenous aquatic species richness in the United States reveal shifting spatial and temporal patterns of species introductions Trends in nonindigenous aquatic species richness in the United States reveal shifting spatial and temporal patterns of species introductions

Understanding the spatial and temporal dynamics underlying the introduction and spread of nonindigenous aquatic species (NAS) can provide important insights into the historical drivers of biological invasions and aid in forecasting future patterns of nonindigenous species arrival and spread. Increasingly, public databases of species observation records are being used to quantify changes...
Authors
Michael J. Mangiante, Amy J. S. Davis, Stephanie Panlasigui, Matthew E. Neilson, Ian Pfingsten, Pam Fuller, John A. Darling

Distribution of mining-related trace elements in streambed and flood-plain sediment along the middle Big River and tributaries in the Southeast Missouri Barite District, 2012–15 Distribution of mining-related trace elements in streambed and flood-plain sediment along the middle Big River and tributaries in the Southeast Missouri Barite District, 2012–15

Lead mining first began in the Big River watershed during the 1700s. Lead was the primary metal mined throughout most of the 1700s and early 1800s and it continued to be mined until the mid-1900s. Barite mining began in the middle part of the watershed in the mid- to late 1800s. Although considerable attention has been given to concentrations of miningrelated trace elements (mostly...
Authors
David C. Smith, John G. Schumacher

Assessment of chronic low‐dose elemental and radiological exposures of biota at the Kanab North uranium mine site in the Grand Canyon watershed Assessment of chronic low‐dose elemental and radiological exposures of biota at the Kanab North uranium mine site in the Grand Canyon watershed

High‐grade U ore deposits are in various stages of exploitation across the Grand Canyon watershed, yet the effects of U mining on ecological and cultural resources are largely unknown. We characterized the concentrations of Al, As, Bi, Cd, Co, Cu, Fe, Pb, Hg, Mo, Ni, Se, Ag, Tl, Th, U, and Zn, gross alpha and beta activities, and U and Th radioisotopes in soil, vegetation (Hesperostipa...
Authors
Danielle M. Cleveland, Jo Ellen Hinck, Julia S. Lankton

Thiamine deficiency in fishes: Causes, consequences, and potential solutions Thiamine deficiency in fishes: Causes, consequences, and potential solutions

Thiamine deficiency complex (TDC) is a disorder resulting from the inability to acquire or retain thiamine (vitamin B1) and has been documented in organisms in aquatic ecosystems ranging from the Baltic Sea to the Laurentian Great Lakes. The biological mechanisms leading to TDC emergence may vary among systems, but in fishes, one common outcome is high mortality among early life stages...
Authors
Avril M. Harder, William R. Ardren, Allison N. Evans, Matthew H. Futia, Clifford E. Kraft, J. Ellen Marsden, Catherine A. Richter, Jacques Rinchard, Donald E. Tillitt, Mark R. Christie
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