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Publications

All of our publications are accessible through the USGS Publication Warehouse. Publications by scientists of the Oregon Water Science Center are listed below.

Filter Total Items: 795

Contaminant concentrations in sediments, aquatic invertebrates, and fish in proximity to rail tracks used for coal transport in the Pacific Northwest: A baseline assessment Contaminant concentrations in sediments, aquatic invertebrates, and fish in proximity to rail tracks used for coal transport in the Pacific Northwest: A baseline assessment

Railway transport of coal poses an environmental risk because coal dust contains polycyclic aromatic hydrocarbons (PAHs), mercury (Hg), and other trace metals. In the Pacific Northwest, proposed infrastructure projects could result in an increase in coal transport by train through the Columbia River corridor. Baseline information is needed on current distributions, levels, and spatial...
Authors
Whitney B Hapke, Robert W. Black, Collin A. Eagles-Smith, Cassandra Smith, Lyndal Johnson, Gina M Ylitalo, Daryle Boyd, Jay W. Davis, Sara L. Caldwell Eldridge, Elena Nilsen

Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure

Estuaries worldwide are undergoing changes to patterns of aquatic productivity because of human activities that alter flow, impact sediment delivery and thus the light field, and contribute nutrients and contaminants like pesticides and metals. These changes can influence phytoplankton communities, which in turn can alter estuarine food webs. We used multiple approaches-including high...
Authors
Elizabeth B. Stumpner, Brian A. Bergamaschi, Tamara E. C. Kraus, Alexander Parker, Francis Wilkerson, Bryan D. Downing, Richard Dugdale, Michael T. Murrell, Kurt D. Carpenter, James Orlando, Carol Kendall

Using the precipitation-runoff modeling system to predict seasonal water availability in the upper Klamath River basin, Oregon and California Using the precipitation-runoff modeling system to predict seasonal water availability in the upper Klamath River basin, Oregon and California

Accurate forecasts of the streamflow expected during late spring and summer in the Upper Klamath River Basin in southern-central Oregon and northern California are used by water management agencies to balance water allocations for agriculture, aquatic habitat, and hydropower-production needs. Streamflow forecasts are also used by irrigation farmers for planning. The forecasts are...
Authors
John C. Risley

Timber harvest alters mercury bioaccumulation and food web structure in headwater streams Timber harvest alters mercury bioaccumulation and food web structure in headwater streams

Timber harvest has many effects on aquatic ecosystems, including changes in hydrological, biogeochemical, and ecological processes that can influence mercury (Hg) cycling. Although timber harvest’s influence on aqueous Hg transformation and transport are well studied, the effects on Hg bioaccumulation are not. We evaluated Hg bioaccumulation, biomagnification, and food web structure in...
Authors
James Willacker, Collin A. Eagles-Smith, Brandon M Kowalski, Robert J Danehy, Allyson K. Jackson, Evan M. Adams, David C. Evers, Chris S. Eckley, Michael T. Tate, David P. Krabbenhoft

Refining the Baseline Sediment Budget for the Klamath River, California Refining the Baseline Sediment Budget for the Klamath River, California

Four dams in the Klamath River Hydroelectric Project (KHP) in Oregon and California (Figure 1) are currently scheduled to be removed over a period of a few weeks or months, beginning in January 2021. The Klamath dam removal will be the largest in the world by almost all measures, and is an unprecedented opportunity to advance science of river responses to such events. The KHP contains
Authors
Chauncey W. Anderson, Scott Wright, Liam N. Schenk, Katherine Skalak, Jennifer A. Curtis, Amy E. East, Adam J. Benthem

Assessing potential effects of highway and urban runoff on receiving streams in total maximum daily load watersheds in Oregon using the stochastic empirical loading and dilution model Assessing potential effects of highway and urban runoff on receiving streams in total maximum daily load watersheds in Oregon using the stochastic empirical loading and dilution model

The Stochastic Empirical Loading and Dilution Model (SELDM) was developed by the U.S. Geological Survey (USGS) in cooperation with the Federal Highway Administration to simulate stormwater quality. To assess the effects of runoff, SELDM uses a stochastic mass-balance approach to estimate combinations of pre-storm streamflow, stormflow, highway runoff, event mean concentrations (EMCs) and
Authors
Adam J. Stonewall, Gregory E. Granato, Kira M. Glover-Cutter

Annual variations in microcystin occurrence in Upper Klamath Lake, Oregon, based on high-throughput DNA sequencing, qPCR, and environmental parameters Annual variations in microcystin occurrence in Upper Klamath Lake, Oregon, based on high-throughput DNA sequencing, qPCR, and environmental parameters

Cyanobacteria-dominated blooms in Upper Klamath Lake, Oregon, create poor water quality and produce microcystins that may be detrimental to local wildlife and human health. Genetic tools, including high-throughput DNA sequencing and quantitative polymerase chain reaction (qPCR), have been shown to improve the identification and quantification of key groups associated with these blooms...
Authors
Sara L. Caldwell Eldridge, Tamara M. Wood

Predicting attenuation of salinized surface- and groundwater-resources from legacy energy development in the Prairie Pothole Region Predicting attenuation of salinized surface- and groundwater-resources from legacy energy development in the Prairie Pothole Region

Oil and gas (energy) development in the Williston Basin, which partly underlies the Prairie Pothole Region in central North America, has helped meet U.S. energy demand for decades. Historical handling and disposal practices of saline wastewater co-produced during energy development resulted in salinization of surface and groundwater at numerous legacy energy sites. Thirty years of...
Authors
Todd M. Preston, Chauncey W. Anderson, Joanna N. Thamke, Blake R. Hossack, Katherine Skalak, Isabelle M. Cozzarelli

Relationships between diatom metrics based on species nutrient traits and agricultural land use Relationships between diatom metrics based on species nutrient traits and agricultural land use

We assessed how diatom metrics were related to different ranges of agricultural land use. Diatom assemblage composition, nutrients, and landscape characteristics were determined at 232 sites in eight agriculturally dominated study areas of the continental United States. Two regional groups based on differences in diatom relations to human disturbance were determined. Changes in diatom...
Authors
Robert Pillsbury, R. Jan Stevenson, Mark D. Munn, Ian R. Waite

Assessment of Columbia and Willamette River flood stage on the Columbia Corridor Levee System at Portland, Oregon, in a future climate Assessment of Columbia and Willamette River flood stage on the Columbia Corridor Levee System at Portland, Oregon, in a future climate

To support Levee Ready Columbia’s (LRC’s) effort to re-certify levees along the Columbia and Willamette Rivers and remain accredited, two 2-dimensional hydraulic models, Adaptive Hydraulics and Delft3D-Flexible Mesh, were used to simulate the effects of plausible extreme high water during the 2030 to 2059 period. The Columbia River was simulated from Bonneville Dam, situated at river...
Authors
Susan A. Wherry, Tamara M. Wood, Hans R. Moritz, Keith B. Duffy

Toxicokinetics of imidacloprid-coated wheat seeds in Japanese quail (Coturnix japonica) and an evaluation of hazard Toxicokinetics of imidacloprid-coated wheat seeds in Japanese quail (Coturnix japonica) and an evaluation of hazard

Birds are potentially exposed to neonicotinoid insecticides by ingestion of coated seeds during crop planting. Adult male Japanese quail were orally dosed with wheat seeds coated with an imidacloprid (IMI) formulation at either 0.9 mg/kg body weight (BW) or 2.7 mg/kg BW (~3 and 9% of IMI LD50 for Japanese quail, respectively) for 1 or 10 days. Quail were euthanized between 1 and 24 h...
Authors
Thomas G. Bean, Michael S. Gross, Natalie Karouna-Renier, Paula F. P. Henry, Sandra L. Schultz, Michelle L. Hladik, Kathryn Kuivila, Barnett A. Rattner

Effects of urban multi-stressors on three stream biotic assemblages Effects of urban multi-stressors on three stream biotic assemblages

During 2014, the U.S. Geological Survey (USGS) National Water-Quality Assessment(NAWQA) project assessed stream quality in 75 streams across an urban disturbance gradient within the Piedmont ecoregion of southeastern United States. Our objectives were to identify primary instream stressors affecting algal, macroinvertebrate and fish assemblages in wadeable streams. Biotic communities...
Authors
Ian R. Waite, Mark D. Munn, Patrick W. Moran, Christopher P. Konrad, Lisa H. Nowell, Michael R. Meador, Peter C. Van Metre, Daren M. Carlisle
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