Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42790
Editorial: Environmental DNA innovations for conservation Editorial: Environmental DNA innovations for conservation
Environmental DNA (eDNA) analysis refers to the collection of bulk environmental samples such as water, sediment, or air, and studying the genetic remnants that organisms have shed into their environment to gain information about species presence.
Authors
Matthew A Barnes, Katy E. Klymus, Hiroki Yamanaka
Behavior and movement of smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Columbia River, August–December 2020 Behavior and movement of smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Columbia River, August–December 2020
A telemetry study was conducted during August–December 2020 to evaluate behavior and movement patterns of adult smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Washington. A total of 40 smallmouth bass were collected, tagged, and released during August–September in seven distinct areas of the dam forebay and monitored until mid-December. Movement data from 36...
Authors
Tobias J. Kock, Gabriel S. Hansen, Scott D. Evans
Bayesian modeling can facilitate adaptive management in restoration Bayesian modeling can facilitate adaptive management in restoration
There is an urgent need for near-term predictions of ecological restoration outcomes despite imperfect knowledge of ecosystems. Restoration outcomes are always uncertain but integrating Bayesian modeling into the process of adaptive management allows researchers and practitioners to explicitly incorporate prior knowledge of ecosystems into future predictions. Although barriers exist...
Authors
Cara Applestein, T. Trevor Caughlin, Matthew J. Germino
Rapid embryonic development supports the early onset of gill functions in two coral reef damselfishes Rapid embryonic development supports the early onset of gill functions in two coral reef damselfishes
The gill is one of the most important organs for growth and survival of fishes. Early life stages in coral reef fishes often exhibit extreme physiological and demographic characteristics that are linked to well-established respiratory and ionoregulatory processes. However, gill development and function in coral reef fishes is not well-understood. Therefore, we investigated gill...
Authors
LA Prescott, Amy M. Regish, SJ McMahon, Stephen D. McCormick, JL Rummer
Invasive black carp as a reservoir host for the freshwater mollusk parasite Aspidogaster conchicola: Further evidence of mollusk consumption and implications for parasite dispersal Invasive black carp as a reservoir host for the freshwater mollusk parasite Aspidogaster conchicola: Further evidence of mollusk consumption and implications for parasite dispersal
Black Carp (Mylopharyngodon piceus) has invaded the Mississippi River and is a potential threat to native mollusks. During prior diet research, we discovered that the fluke Aspidogaster conchicola, a mollusk parasite, occurs regularly in the gastrointestinal tract of Black Carp. The fluke remains in fish intestines for extended periods after the fish has consumed its host. Flukes were...
Authors
Barry C. Poulton, Jennifer Bailey, Patrick Kroboth, Amy E. George, Duane Chapman
Telemetry reveals migratory drivers and disparate space use across seasons and age-groups in American horseshoe crabs Telemetry reveals migratory drivers and disparate space use across seasons and age-groups in American horseshoe crabs
Identifying mechanisms that underpin animal migration patterns and examining variability in space use within populations is crucial for understanding population dynamics and management implications. In this study, we quantified the migration rates, seasonal changes in migratory connectivity, and residency across population demographics (age and sex) to understand the proximate cues of...
Authors
Justin J. Bopp, Matthew Sclafani, Michael G. Frisk, Kim McKown, Catherine Zeigler, David R. Smith, Robert Cerrato
Sustaining transmission in different host species: The emblematic case of Sarcoptes scabiei Sustaining transmission in different host species: The emblematic case of Sarcoptes scabiei
Some pathogens sustain transmission in multiple different host species, but how this epidemiologically important feat is achieved remains enigmatic. Sarcoptes scabiei is among the most host generalist and successful of mammalian parasites. We synthesize pathogen and host traits that mediate sustained transmission and present cases illustrating three transmission mechanisms (direct...
Authors
E Browne, MM Driessen, Paul C. Cross, L. E. Escobar, Janet E. Foley, Lopez-Olvera, KD Niedringhaus, Liza Rossi, Scott Carver
Effects of sea ice decline and summer land use on polar bear home range size in the Beaufort Sea Effects of sea ice decline and summer land use on polar bear home range size in the Beaufort Sea
Animals responding to habitat loss and fragmentation may increase their home ranges to offset declines in localized resources or they may decrease their home ranges and switch to alternative resources. In many regions of the Arctic, polar bears (Ursus maritimus) exhibit some of the largest home ranges of any quadrupedal mammal. Polar bears are presently experiencing a rapid decline in...
Authors
Anthony M. Pagano, George M. Durner, Todd C. Atwood, David C. Douglas
Sediment-ecological connectivity in a large river network Sediment-ecological connectivity in a large river network
Sediment eroded from the headwaters of a large basin strongly influences channels and ecosystems far downstream, but the connection is often difficult to trace. Disturbance-dependent riparian trees are thought to rely primarily on floods for formation of the sand bars necessary for seedling establishment, but pulses of sediment should also promote formation of such features. In order to...
Authors
John T. Kemper, R. D. Thaxton, Sara L. Rathburn, Jonathan M. Friedman, Erich R. Mueller, Michael L. Scott
Grassification and fast-evolving fire connectivity and risk in the Sonoran Desert, United States Grassification and fast-evolving fire connectivity and risk in the Sonoran Desert, United States
In the southwestern United States, non-native grass invasions have increased wildfire occurrence in deserts and the likelihood of fire spread to and from other biomes with disparate fire regimes. The elevational transition between desertscrub and montane grasslands, woodlands, and forests generally occurs at ∼1,200 masl and has experienced fast suburbanization and an expanding wildland...
Authors
Benjamin T. Wilder, Catherine S. Jarnevich, Elizabeth Baldwin, Joseph S. Black, Kim A. Franklin, Perry Grissom, Katherine Hovanes, Aaryn Olsson, Jim Malusa, Abu S.M.G. Kibria, Yue M. Li, Aaron M. Lien, Alejandro Ponce, Julia A. Rowe, Jose Soto, Maya Stahl, Nicholas Young, Julio L. Betancourt
Next-generation lampricides: A three-stage process to develop improved control tools for invasive sea lamprey Next-generation lampricides: A three-stage process to develop improved control tools for invasive sea lamprey
Successful integrated management of the invasive predatory sea lamprey (Petromyzon marinus) in the Laurentian Great Lakes of North America is owed largely to the long history of beneficial use of two lampricides: 3-trifluoromethyl-4-nitrophenol (TFM) and 2′,5-dichloro-4′-nitrosalicylanilide (niclosamide). Ensuring continued successful sea lamprey control necessitates consideration of...
Authors
Steve Lantz, Bob Adair, Jon Amberg, Roger A. Bergstedt, Michael A. Boogaard, Ugo Bussy, Margaret F. Docker, Erin S. Dunlop, Alex Gonzalez, Terrance Hubert, Michael J. Siefkes, Paul Sullivan, Steve Whyard, Michael P. Wilkie, Bradley Young, Andrew M. Muir
The effects of management practices on grassland birds—Grasshopper Sparrow (Ammodramus savannarum) The effects of management practices on grassland birds—Grasshopper Sparrow (Ammodramus savannarum)
The key to Grasshopper Sparrow (Ammodramus savannarum) management is providing large areas of contiguous grassland of intermediate height with moderately deep litter and low shrub density. Grasshopper Sparrows have been reported to use habitats with 8–166 centimeters (cm) average vegetation height, 4–80 cm visual obstruction reading, 12–95 percent grass cover, 4–40 percent forb cover...
Authors
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Melvin P. Nenneman, Travis L. Wooten, Betty R. Euliss