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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42700

Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore

Urban expansion has widespread impacts on wildlife species globally, including the transmission and emergence of infectious diseases. However, there is almost no information about how urban landscapes shape transmission dynamics in wildlife. Using an innovative phylodynamic approach combining host and pathogen molecular data with landscape characteristics and host traits, we untangle the...
Authors
Nicholas M. Fountain-Jones, Meggan E. Craft, W. Chris Funk, Chris Kozakiewicz, Daryl Trumbo, Erin E. Boydston, Lisa M. Lyren, Kevin R. Crooks, Justin S. Lee, Sue VandeWoude, Scott Carver

Epicormic resprouting in fire-prone ecosystems Epicormic resprouting in fire-prone ecosystems

Many plants resprout from basal buds after disturbance, and this is common in shrublands subjected to high-intensity fires. However, resprouting after fire from epicormic (stem) buds is globally far less common. Unlike basal resprouting, post-fire epicormic resprouting is a key plant adaptation for retention of the arborescent skeleton after fire, allowing rapid recovery of the forest or...
Authors
Juli G. Pausas, Jon E. Keeley

An improved camera trap for amphibians, reptiles, small mammals, and large invertebrates An improved camera trap for amphibians, reptiles, small mammals, and large invertebrates

Camera traps are valuable sampling tools commonly used to inventory and monitor wildlife communities but are challenged to reliably sample small animals. We introduce a novel active camera trap system enabling the reliable and efficient use of wildlife cameras for sampling small animals, particularly reptiles, amphibians, small mammals and large invertebrates. It surpasses the detection...
Authors
Michael T. Hobbs, Cheryl S. Brehme

Linking functional response and bioenergetics to estimate juvenile salmon growth in a reservoir food web Linking functional response and bioenergetics to estimate juvenile salmon growth in a reservoir food web

Juvenile salmon (Oncorhynchus spp.) use of reservoir food webs is understudied. We examined the feeding behavior of subyearling Chinook salmon (O. tshawytscha) and its relation to growth by estimating the functional response of juvenile salmon to changes in the density of Daphnia, an important component of reservoir food webs. We then estimated salmon growth across a broad range of water
Authors
Craig A. Haskell, David A. Beauchamp, Stephen M. Bollens

Phylogenetic distribution of a male pheromone that may exploit a nonsexual preference in lampreys Phylogenetic distribution of a male pheromone that may exploit a nonsexual preference in lampreys

Pheromones are among the most important sexual signals used by organisms throughout the animal kingdom. However, few are identified in vertebrates, leaving the evolutionary mechanisms underlying vertebrate pheromones poorly understood. Pre-existing biases in receivers’ perceptual systems shape visual and auditory signaling systems, but studies on how receiver biases influence the...
Authors
Tyler J. Buchinger, Ugo Bussy, Ke Li, Huiyong Wang, Mar Huertas, Cindy F. Baker, Liang Jia, Michael C. Hayes, Weiming Li, Nicholas S. Johnson

Characterizing interactions between fire and other disturbances and their impacts on tree mortality in western U.S. Forests Characterizing interactions between fire and other disturbances and their impacts on tree mortality in western U.S. Forests

Increasing evidence that pervasive warming trends are altering disturbance regimes and their interactions with fire has generated substantial interest and debate over the implications of these changes. Previous work has primarily focused on conditions that promote non-additive interactions of linked and compounded disturbances, but the spectrum of potential interaction patterns has not...
Authors
Jeffrey M. Kane, J. Morgan Varner, Margaret R. Metz, Phillip J. van Mantgem

Defining ecological drought for the 21st century Defining ecological drought for the 21st century

No abstract available.
Authors
Shelley D. Crausbay, Aaron R. Ramirez, Shawn L. Carter, Molly S. Cross, Kimberly R. Hall, Deborah J. Bathke, Julio L. Betancourt, Steve Colt, Amanda E. Cravens, Melinda S. Dalton, Jason B. Dunham, Lauren E. Hay, Michael J. Hayes, Jamie McEvoy, Chad A. McNutt, Max A. Moritz, Keith H. Nislow, Nejem Raheem, Todd Sanford

The NorWeST summer stream temperature model and scenarios for the western U.S.: A crowd-sourced database and new geospatial tools foster a user-community and predict broad climate warming of rivers and streams The NorWeST summer stream temperature model and scenarios for the western U.S.: A crowd-sourced database and new geospatial tools foster a user-community and predict broad climate warming of rivers and streams

Thermal regimes are fundamental determinants of aquatic ecosystems, which makes description and prediction of temperatures critical during a period of rapid global change. The advent of inexpensive temperature sensors dramatically increased monitoring in recent decades, and although most monitoring is done by individuals for agency‐specific purposes, collectively these efforts constitute...
Authors
Daniel J. Isaak, Seth J. Wenger, Erin E. Peterson, Jay M Ver Hoef, David E Nagel, Charlie H. Luce, Steven W. Hostetler, Jason B. Dunham, Brett B. Roper, Sherry P Wollrab, Gwynne L Chandler, Dona L Horan, Sharon Parkes-Payne

A revised list of the freshwater mussels (Mollusca: Bivalvia: Unionida) of the United States and Canada A revised list of the freshwater mussels (Mollusca: Bivalvia: Unionida) of the United States and Canada

We present a revised list of freshwater mussels (order Unionida, families Margaritiferidae and Unionidae) of the United States and Canada, incorporating changes in nomenclature and systematic taxonomy since publication of the most recent checklist in 1998. We recognize a total of 298 species in 55 genera in the families Margaritiferidae (one genus, five species) and Unionidae (54 genera...
Authors
James D. Williams, Arthur E. Bogan, Robert S. Butler, Kevin S. Cummings, Jeffrey T. Garner, John L. Harris, Nathan A. Johnson, G. Thomas Watters

Meteorological and environmental variables affect flight behaviour and decision-making of an obligate soaring bird, the California Condor Gymnogyps californianus Meteorological and environmental variables affect flight behaviour and decision-making of an obligate soaring bird, the California Condor Gymnogyps californianus

The movements of animals are limited by evolutionary constraints and ecological processes and are strongly influenced by the medium through which they travel. For flying animals, variation in atmospheric conditions is critically influential in movement. Obligate soaring birds depend on external sources of updraft more than do other flying species, as without that updraft they are unable...
Authors
Sharon A. Poessel, Joseph Brandt, Tricia A. Miller, Todd E. Katzner

Effects of flood inundation and invasion by Phalaris arundinacea on nitrogen cycling in an Upper Mississippi River floodplain forest Effects of flood inundation and invasion by Phalaris arundinacea on nitrogen cycling in an Upper Mississippi River floodplain forest

Although floodplains are thought to serve as important buffers against nitrogen (N) transport to aquatic systems, frequent flooding and high levels of nutrient availability also make these systems prone to invasion by exotic plant species. Invasive plants could modify the cycling and availability of nutrients within floodplains, with effects that could feedback to promote the persistence...
Authors
Whitney Swanson, Nathan R. De Jager, Eric A. Strauss, Meredith Thomsen

Experimental infection of common eider ducklings with Wellfleet Bay virus, a newly characterized orthomyxovirus Experimental infection of common eider ducklings with Wellfleet Bay virus, a newly characterized orthomyxovirus

Wellfleet Bay virus (WFBV), a novel orthomyxovirus in the genus Quaranjavirus, was first isolated in 2006 from carcasses of common eider (Somateria mollissima) during a mortality event in Wellfleet Bay (Barnstable County, Massachusetts, USA) and has since been repeatedly isolated during recurrent mortality events in this location. Hepatic, pancreatic, splenic, and intestinal necrosis...
Authors
Valerie I. Shearn-Bochsler, S. Ip, Anne Ballmann, Jeffrey S. Hall, Andrew B. Allison, Jennifer R. Ballard, Julie C. Ellis, Robert Cook, Samantha E.J. Gibbs, Chris P. Dwyer
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