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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42701

Synthesis of observed field salinity ranges for oyster and seagrass species in the U.S. Synthesis of observed field salinity ranges for oyster and seagrass species in the U.S.

Oyster and seagrass are important sessile, habitat-forming species that may be impacted by changes in salinity regimes from anthropogenic or climatic drivers. While salinity tolerance literature is focused on controlled experiments, observed field salinity ranges of species are more disparate. The salinity ranges in which organisms are observed in the field may not align exactly with...
Authors
Charlotte I. Lee, Simeon Yurek, David B. Eggleston, Natalie G. Nelson

Fall 2025 Fall 2025

In this newsletter, we are excited to share our recent publication, Bridging theory and practice to inform seed selection for restoration, which is part of an ongoing collaborative effort with land managers and restoration practitioners to synthesize lessons learned and identify future research directions for native seed development and use in the U.S. We would also like to say thank you...
Authors
Laura Cecilia Shriver

Water temperature analysis of the North Branch Au Sable River, Michigan, and implications to salmonid populations Water temperature analysis of the North Branch Au Sable River, Michigan, and implications to salmonid populations

Ambient stream water temperatures affect salmonid movement and survival with fish actively seeking thermal refugia from warming waters. This study sought to investigate the potential role of water temperature in the perceived decline in native Brook Trout Salvelinus fontinalis and non-native Brown Trout Salmo trutta populations in the North Branch Au Sable River by fishers and reported...
Authors
Nicole M. Watson, Daniel B. Hayes, Neal Godby

Texas coastal wetland surface elevation static survey campaign report Texas coastal wetland surface elevation static survey campaign report

Surface elevation data along the Texas Coast is limited, despite having some of the highest rates of relative sea-level rise in the country (Sweet et al., 2022). To narrow these knowledge and data gaps, the U.S. Fish and Wildlife Service (USFWS) established the first landscape-scale rod surface elevation table (RSET) monitoring project aimed at examining surface elevation dynamics of...
Authors
Brett Patton, Colt R. Sanspree, Jena A. Moon, Sierra R. Moran

Long Term Resource Monitoring procedures—Aquatic vegetation monitoring Long Term Resource Monitoring procedures—Aquatic vegetation monitoring

This standard operating procedure (SOP) manual describes the collection of standardized, long-term data for aquatic vegetation communities in selected study pools of the Upper Mississippi River System in the United States. The primary intent of the data collection is to assess the status and trends that aid in understanding the unique river ecosystem and to guide large-scale ecological...
Authors
Danelle M. Larson, Eric Lund, Alicia M. Carhart, Seth Fopma, Stephanie Szura

Mapping potential sensitivity to hydrogeomorphic change in the UMRS riverscape Mapping potential sensitivity to hydrogeomorphic change in the UMRS riverscape

In 2020 the U.S. Geological Survey (USGS), as part of the Upper Mississippi River Restoration (UMRR) Program, began a new project to characterize potential hydrogeomorphic change associated with hydrogeomorphic units (HGUs) and their catenae (units linked by their association with sediment sources and flow origins). The goal of the project was to develop a geographic information system...
Authors
Angus Vaughan, Faith Fitzpatrick, Jayme M. Strange, Molly Van Appledorn

Unique thermal mixing patterns in Lake Ontario revealed by novel year-round observations of thermal stratification Unique thermal mixing patterns in Lake Ontario revealed by novel year-round observations of thermal stratification

Year-round records of thermal stratification in the Great Lakes are rare, and there are few observations of thermal stratification during winter. In this paper, we analyze temperature data from 13 temperature logger chains and from over 130 benthic acoustic receivers that were deployed across Lake Ontario for 2 yr. The timing and duration of the fall overturn correlate with the local...
Authors
Mathew Wells, Tim B. Johnson, Rylie Robinson, Jon Midwood, Yulu Shi, Sarah M. Larocque, Adam Eddie, Brian O’Malley, Kyle Morton, Dimitri Gorsky, Bruce Tufts

Different data for different goals: Exploring trade-offs and synergies in the use of spatial data inputs to optimize conservation action in sagebrush ecosystems Different data for different goals: Exploring trade-offs and synergies in the use of spatial data inputs to optimize conservation action in sagebrush ecosystems

Ecosystems worldwide continue to experience rapid rates of habitat and species loss. Management actions to conserve and restore functional habitats are needed to reduce these declines, but funding and resources for such actions are limited. Spatial conservation prioritization (SCP) can facilitate strategic decision-making for targeted conservation planning and delivery, but complexities...
Authors
Jessica E. Shyvers, Bryan C. Tarbox, Adrian P. Monroe, Nicholas J. Van Lanen, Benjamin Seward Robb, Erin K. Buchholtz, Courtney J. Duchardt, David R. Edmunds, Michael S. O’Donnell, Nathan D. Van Schmidt, Julie A. Heinrichs, Cameron L. Aldridge

Channel and floodplain cross-section and bed-elevation analyses of the Green River in Echo, Island, and Rainbow Parks, Dinosaur National Monument, Colorado and Utah Channel and floodplain cross-section and bed-elevation analyses of the Green River in Echo, Island, and Rainbow Parks, Dinosaur National Monument, Colorado and Utah

This report by the U.S. Geological Survey focuses on describing geomorphic changes in the alluvial segments of the Green River within Echo, Island, and Rainbow Parks of Dinosaur National Monument, between the 1990s and 2019. Substantial channel change occurred within these meandering alluvial segments following the construction and closure of Flaming Gorge Dam in 1962. Geomorphic...
Authors
David J. Dean, Paul E. Grams, Shannon Leigh Sartain, Christy M. Leonard, Ronald E. Griffiths, Joel A. Unema, David J. Topping, John C. Schmidt

Controls on sediment transport and storage in the Little Snake, Yampa, and Green Rivers in the vicinities of Dinosaur National Monument and Ouray National Wildlife Refuge, Colorado and Utah, with implications for fish habitat in the middle Green River Controls on sediment transport and storage in the Little Snake, Yampa, and Green Rivers in the vicinities of Dinosaur National Monument and Ouray National Wildlife Refuge, Colorado and Utah, with implications for fish habitat in the middle Green River

The transport of sand and finer sediment in the Yampa and Green river network is typically in disequilibrium with the local sediment supply because of the partial decoupling of the sources of water and sediment: most of the water is supplied farther upstream than most of the sediment. This decoupling leads to sand being transported in the main-stem rivers as elongating sand waves...
Authors
David J. Topping, Ronald E. Griffiths, Joel A. Unema, David J. Dean

Potential risks of vegetation treatments to introduce and increase invasive annual grasses in rangelands of Montana, North Dakota, and South Dakota—A science synthesis to inform National Environmental Policy Act analyses Potential risks of vegetation treatments to introduce and increase invasive annual grasses in rangelands of Montana, North Dakota, and South Dakota—A science synthesis to inform National Environmental Policy Act analyses

The U.S. Geological Survey is working with Federal land management agencies to develop a series of planned structured science syntheses to support environmental effects analyses that agencies conduct under the National Environmental Policy Act (NEPA). This report synthesizes science information relevant to environmental effects analyses concerned with potential increases in the...
Authors
Aaron N. Johnston, David J. A. Wood, Kyle Ebenhoch, Tait K. Rutherford, Logan M. Maxwell, Sarah K. Carter

An expert elicitation to inform coastal management decision-making for mitigating future hazards An expert elicitation to inform coastal management decision-making for mitigating future hazards

A scientific expert elicitation was conducted to address the feasibility of restoring coastal environments in response to future hazards to best meet management objectives. Subject matter experts produced probabilistic estimates of coastal change metrics used to evaluate decision objectives and alternatives informed by a stakeholder advisory group. Changes in salt marsh extents, storm...
Authors
Davina Passeri, Matthew Richardson, Julien Martin, Simeon Yurek, Karim Alizad, Matthew V. Bilskie, James Flocks, Donya P. Frank-Gilchrist, Robert Jenkins, Rangley C. Mickey, Margaret L. Palmsten, Christopher F. Smith, Kathryn Smith, Sara Zeigler
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