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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 174907

Occurrence and surface availability of Siskiyou Mountains Salamanders (Plethodon stormi) and Scott Bar Salamanders (P. asupak) in northern California Occurrence and surface availability of Siskiyou Mountains Salamanders (Plethodon stormi) and Scott Bar Salamanders (P. asupak) in northern California

Estimating the distributions of cryptic species is essential for conservation, yet our understanding is hampered by animal behavior and imperfect detection. We developed and implemented a multiscale occupancy survey protocol to estimate the probability of occurrence, probability of being active on the surface, and detection probability of two range-restricted terrestrial salamanders...
Authors
Brian Halstead, Daniel Antonio Macias, Casey D. Moss, Patrick M. Kleeman, Jonathan P. Rose

Spatial distribution and relative biomass of bigheaded carps in Lake Balaton, Hungary estimated from an environmental DNA survey Spatial distribution and relative biomass of bigheaded carps in Lake Balaton, Hungary estimated from an environmental DNA survey

Silver carp (Hypophthalmichthys nobilis), bighead carp (H. molitrix) and their hybrids, collectively known as bigheaded carps, have been introduced to Lake Balaton, Hungary. The current stock sizes are difficult to assess. We investigated environmental DNA (eDNA) techniques targeted for bigheaded carps, assessed the spatial distribution of eDNA in Lake Balaton, compared eDNA...
Authors
Nora Boross, Ardo Laszlo, Duane C. Chapman, Gergely Boros, Zoltán Vitál, Viktor Tóth, Nathan Thompson, Katy E. Klymus, Catherine A. Richter

Development of genomic markers for monitoring and research on plethodontid salamanders Development of genomic markers for monitoring and research on plethodontid salamanders

Despite the importance of plethodontid salamanders and their vulnerability to ongoing environmental change, they are inherently difficult to monitor due to their cryptic nature. Recent advances in genomics have created new opportunities for monitoring of populations and their responses to environmental perturbations. In this study, we developed a new target capture-based genomic panel...
Authors
Benjamin M. Fitzpatrick, Kara Suzanne Jones, Aaron W. Aunins, Michael S. Eackles, David C. Kazyak

Global recreational consumption of non-native inland fish: Higher economic benefits, but lower nutritional value and climate resilience Global recreational consumption of non-native inland fish: Higher economic benefits, but lower nutritional value and climate resilience

Inland recreational fisheries are globally significant leisure pursuits, with well-documented benefits to human health and well-being, but also one of the principal drivers of non-native fish introductions to enhance fishing opportunities, whether for sport or sustenance. In this study, we assess the relative reliance of global inland recreational fisheries on non-native versus native...
Authors
Marco Milardi, Louisa E. Wood, Elizabeth A. Nyboer, Holly Susan Embke, Sui C. Phang, Abigail J. Lynch

U.S. Geological Survey geomagnetic variometer data: Capitalizing on seismic infrastructure U.S. Geological Survey geomagnetic variometer data: Capitalizing on seismic infrastructure

The U.S. Geological Survey’s Geomagnetism Program is collaborating with the Earthquake Hazards Program and Global Seismographic Network Program to densify magnetic field observations. This collaboration focuses on the installation of magnetometers, or magnetic variometers, at existing seismic stations. Along with improving the density of space weather observations for hazard monitoring...
Authors
Adam T. Ringler, Andrew Holcomb, E. Joshua Rigler, Spencer Wilbur, C. Balch, Corey Beutel, Brendan Ryan Geels, J. Guerra, A. Horton, Edward Kromer, Kristen A. Lewis, Jeffrey J. Love, Yolando Root, Claudia Kristina Rossavik, N. Shavers, John Spritzer, Tyler Storm, Alexandra Nicole Wernle, David C. Wilson

Missing data in ecology: Syntheses, clarifications, and considerations Missing data in ecology: Syntheses, clarifications, and considerations

In ecology and related sciences, missing data are common and occur in a variety of different contexts. When missing data are not handled properly, subsequent statistical estimates tend to be biased, inefficient, and lack proper confidence interval coverage. Missing data are often grouped into three categories: missing completely at random (MCAR), missing at random (MAR), and missing not...
Authors
Michael Dumelle, Rob Trangucci, Amanda M. Nahlik, Anthony R Olsen, Kathryn Irvine, Karen A. Blocksom, Jay Ver Hoef, Claudio Fuentes

Assessment of coastal and fluvial morphodynamic changes using Structure-for-Motion: A case study of the Sfȃntu Gheorghe Mouth (Danube Delta, Romania) Assessment of coastal and fluvial morphodynamic changes using Structure-for-Motion: A case study of the Sfȃntu Gheorghe Mouth (Danube Delta, Romania)

The ability to accurately map erosion, flooding, and habitat loss in coastal environments is crucial for formulating national strategies aimed at preventing and mitigating the impacts of natural disasters. A fundamental component of this process is the implementation of coastal morphodynamics monitoring through Structure-from-Motion (SfM) techniques, utilizing high-resolution 2D/3D data...
Authors
Andrei Gabriel Dragos, Gabriel Iordache, Florin Dutu, Monica Palaseanu-Lovejoy, Florin Pitea, Irina Stanciu, Adrian Stanica

Too hot for comfort: Elevated temperatures influence gene expression and exceed thermal tolerance of bigmouth shiners, Ericymba dorsalis Too hot for comfort: Elevated temperatures influence gene expression and exceed thermal tolerance of bigmouth shiners, Ericymba dorsalis

Environmental and associated ecosystem change may affect the persistence of fish species based on their ability to adapt to changing conditions, including decreasing flows and rising water temperatures. Exceeding the thermal tolerances of stream fish will likely result in a loss of ability to maintain metabolic processes. We evaluated the critical thermal maximum (CTmax) of bigmouth...
Authors
Ella K. Humphrey, Jonathan J. Spurgeon, Lizabeth Bowen, Robert E. Wilson, Shannon C. Waters-Dynes, Braxton M. Newkirk, Sarah A. Sonsthagen

Refined chronology of late Quaternary eruptions at Harrat Khaybar, Saudi Arabia, with implications for magma dynamics and regional volcanic history Refined chronology of late Quaternary eruptions at Harrat Khaybar, Saudi Arabia, with implications for magma dynamics and regional volcanic history

Determining accurate and precise ages for Quaternary volcanic centers is essential for reconstructing volcanic field histories, understanding magmatic processes, and assessing potential hazards or risk. Harrat Khaybar, western Saudi Arabia, is one of the youngest and potentially most active volcanic fields on the Arabian plate, has been active since ca. 1.7 Ma, and is characterized by a...
Authors
Abdullah Aohali, Shanaka L. de Silva, Alejandro Cisneros de Leon, Charles Lewis, Axel K. Schmitt, Martin Danišík, Mark E. Stelten, Sujoy Mukhopadhyay, Robert Duncan, Frank C. Ramos

Same view through a different lens: Comparing population trends for North American birds using eBird and the Breeding Bird Survey Same view through a different lens: Comparing population trends for North American birds using eBird and the Breeding Bird Survey

Confidently estimating population trends is of vital importance for a wide range of ecological, conservation, and management applications. North America has 2 major data sources for estimating population trends of breeding birds—the North American Breeding Bird Survey (BBS) and the global participatory science project eBird. Because the surveys differ in protocols, coverage, and data...
Authors
Orin J. Robinson, Alison J. Johnston, Wesley M. Hochachka, J. A. Hostetler, John R. Sauer, Tom Auer, Matthew E. Strimas-Mackey, Shawn Ligocki, Nicholas A. Faraco-Hadlock, Viviana Ruiz-Gutierrez, Amanda D. Rodewald, Daniel Fink

Reconciliation of geochronology and paleozoogeography for Quaternary marine terraces, San Luis Obispo Bay area, California, USA Reconciliation of geochronology and paleozoogeography for Quaternary marine terraces, San Luis Obispo Bay area, California, USA

In the San Luis Obispo Bay area of central California, interpretations of marine terrace ages have been hampered by inconsistent results from geochronological indicators (U-series ages of corals and correlations using amino acid racemization of mollusks) and seemingly contradictory paleozoogeographic aspects of fossil faunal assemblages. New U-series ages of corals, amino acid data from...
Authors
Daniel R. Muhs, Lindsey T. Groves, R. Randall Schumann, Jordon Bright

Quantifying depuration of methylmercury from fish consumption by travelers Quantifying depuration of methylmercury from fish consumption by travelers

During a two-week field sampling expedition in Gabon, two American scientists consumed fish daily from the Ogooué River watershed. We sampled their scalp and facial hair periodically to evaluate hair as a biomarker to track shifts in methylmercury (MeHg) exposure from diet. Each individual differed in the onset and extent of MeHg accumulation but showed similar depuration rates. Pretrip...
Authors
Ryan F. Lepak, Jean H. Mve Beh, Clotaire Moukegni-Sika, Jean N.B. Binguema, Sarah E. Janssen, Jacob M. Ogorek, Michael Tate, Peter B. McIntyre
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