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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175041

Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys

Objective The potential for environmental DNA (eDNA) to disperse widely from source organisms enables high detection efficiency but raises questions about eDNA's ability to differentiate fine-scale spatial patterns relative to conventional fish capture data.Methods We evaluate these questions in the St. Louis River estuary—a hydrologically and spatially complex coastal system within Lake...
Authors
Anett S Trebitz, Joel C. Hoffman, Gregory S. Peterson, Chelsea I. Hatzenbuhler, Erik M. Pilgrim, Sara L. Okum, W. Lindsay Chadderton, Andrew J. Tucker, Nicholas Bogyo, Jared Thomas Myers

Critical mineral inventory of select IOA-IOCG deposits, southwestern USA Critical mineral inventory of select IOA-IOCG deposits, southwestern USA

Critical minerals are necessary for modern technology and strategic purposes. Their increasing importance requires finding new and nontraditional resources. Samples of ore, altered, and unaltered host rock were collected from 26 iron mines and prospects in California, Nevada, and Utah to assess the potential of these deposits to host economic quantities of different critical minerals...
Authors
Ryan D. Taylor, Corey J. Meighan, Albert H. Hofstra

Assessing diet and genotyping success of goat pellet surveys from 2019 in Glacier National Park Assessing diet and genotyping success of goat pellet surveys from 2019 in Glacier National Park

Fecal pellets contain genetic information and can be used to identify individuals, their diet, and more. Individual identification can be useful in understanding movements of individuals, developing population estimates, assessing vital rates, genetic diversity and structure, and evaluating trends over time (e.g., Epps et al 2024). Successful genotyping depends on the quality of the...
Authors
Salix Scoresby, Lindsay M Dose, Jami Belt, Tabitha A. Graves

Disturbance is the primary determinant of food chain length when the top predator is constant Disturbance is the primary determinant of food chain length when the top predator is constant

Food chain length (FCL) is a primary determinant of food web structure and is hypothesized to be influenced by habitat size, productivity, and disturbance. Understanding the environmental characteristics that determine food chain length can assist in understanding how food webs may be impacted due to changes in habitats and environmental characteristics. This study examines the impact of
Authors
Sarah F. Sorensen, Daniel D. Magoulick

Living with wildfire in Estes Valley Fire Protection District, Larimer County, Colorado: 2023 Data report Living with wildfire in Estes Valley Fire Protection District, Larimer County, Colorado: 2023 Data report

Homeowner wildfire risk mitigation and preparedness are critical components of community wildfire readiness. This report describes the data collected through two efforts conducted in the Estes Valley Fire Protection District of Larimer County, Colorado, study area: (1) parcel-level rapid wildfire risk assessments performed by trained assessors and (2) homeowner surveys in which...
Authors
Colleen Donovan, Patricia A. Champ, Suzanne Wittenbrink, Wilynn Formeller, Christine Taniguchi, Jon Landkamer, Hannah Brenkert-Smith, James Meldrum, Christopher M. Barth, Carolyn Wagner

Comparison of creek and bay influences on salt marsh sediment budget and deposition patterns Comparison of creek and bay influences on salt marsh sediment budget and deposition patterns

The resilience of salt marshes with low organic production depends on their effective capture and retention of mineral sediment from adjacent waters. Little prior work has directly compared mechanisms of sediment import from wave-influenced marsh boundaries against those of tidal creeks. We used simultaneous deployment of net-deposition tiles and oceanographic sensors to identify the...
Authors
Lukas T. WinklerPrins, Jessica R. Lacy, Mark T. Stacey, Karen M. Thorne, McKenna Leigh Bristow, Scott Jones

Perfluorodecanoic acid (PFDA) disrupts immune regulation via the toll-like receptor signaling pathway in zebrafish Perfluorodecanoic acid (PFDA) disrupts immune regulation via the toll-like receptor signaling pathway in zebrafish

As there are a growing number of per- and polyfluoroalkyl substances (PFAS) alternative substitutes applied globally, it remains paramount to characterize their potential health risks. Perfluorodecanoic acid (PFDA) is the most common alternative PFAS detected in the environment; however, its toxic effects and underlying mechanism of action to aquatic biota remains unclear. In this study...
Authors
Jiazhen Wang, Di Fang, Jason Tyler Magnuson, Bentuo Xu, Chunmiao Zheng, Liang Tang, Wenhui Qiu

Long‐term regime shifts in xeric ecoregion freshwater fish assemblages due to Anthropogenic and climate stressors Long‐term regime shifts in xeric ecoregion freshwater fish assemblages due to Anthropogenic and climate stressors

Shifting climate regimes are projected to increase the area of xeric regions and result in more pronounced intermittency across river networks. Given these projected changes, we aim to understand the factors contributing to species persistence under increasing aridity. To investigate how changing flow regimes are related to changes in fish richness and assemblage composition, we compiled...
Authors
Corey A. Krabbenhoft, Jane S. Rogosch, Freya Elizabeth Rowland

Melt generation sources and conditions in the wake of a migrating slab window: Geochemistry and petrology of the million-year history of primitive volcanism at Clear Lake volcanic field, California Melt generation sources and conditions in the wake of a migrating slab window: Geochemistry and petrology of the million-year history of primitive volcanism at Clear Lake volcanic field, California

Clear Lake volcanic field (CLVF) is the northernmost and youngest (~2.2 Ma to 8 ka) of the volcanic centers distributed along the San Andreas transform fault in western California. The initial phase of CLVF volcanism (interval one) occurred between ~2.2 and 1.3 Ma and extends ~35 km southeast of Clear Lake, forming a semi-continuous upland plateau capped by lava flows, with isolated...
Authors
Dawnika L. Blatter, Seth D. Burgess

A spatiotemporal deep learning approach for predicting daily air-water temperature signal coupling and identification of key watershed physical parameters in a montane watershed A spatiotemporal deep learning approach for predicting daily air-water temperature signal coupling and identification of key watershed physical parameters in a montane watershed

Seasonal shifts from runoff to groundwater dominance influence daily headwater stream temperatures, especially where local groundwater input is strong. This input buffers temperature during hot periods, supporting cold-water habitats. Recent studies use air–water temperature signal metrics to identify zones of strong stream–groundwater connectivity. While Previous studies used air–water...
Authors
Mohammad Reza M. Behbahani, David M. Rey, Martin A. Briggs, Amvrossios Bagtzoglou

Estimated average annualized tsunami losses for the United States Estimated average annualized tsunami losses for the United States

Tsunami hazards are substantial threats to coastal communities across the United States (U.S.) and its territories. U.S. states and territories collaborate through the National Tsunami Hazard Mitigation Program (NTHMP) to develop their own tsunami-hazard information for outreach and evacuation planning. An effort to curate this tsunami-hazard information to support comprehensive risk...
Authors
Anne Sheehan, Casey Zuzak, Nathan J. Wood, Doug Bausch, Cadie Goulette Yeager, Alice McDougall

3D habitat complexity and coral morphology modulate reef fish functional structure in a marine national park 3D habitat complexity and coral morphology modulate reef fish functional structure in a marine national park

The ongoing degradation of coral reef habitats is widely acknowledged to have adverse effects on the abundance and diversity of reef fish populations, yet the direct effects on ecosystem functions remain uncertain. This study used a quantitative approach to determine the mechanistic links between fish assemblages and ecological function. We investigated the effects of 3D habitat...
Authors
Sofia B. Ferreira, John H.R. Burns, Atsuko Fukunaga, Lillian Joy Tuttle Raz, Sheila A. McKenna, Kailea Annandale, Ryan J. Monello
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