Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42700
Spatial conservation planning under uncertainty: Adapting to climate change risks using modern portfolio theory Spatial conservation planning under uncertainty: Adapting to climate change risks using modern portfolio theory
Climate change and urban growth impact habitats, species, and ecosystem services. To buffer against global change, an established adaptation strategy is designing protected areas to increase representation and complementarity of biodiversity features. Uncertainty regarding the scale and magnitude of landscape change complicates reserve planning and exposes decision makers to risk of...
Authors
Mitchell J. Eaton, Simeon Yurek, Zulqarnain Haider, Julien Martin, Fred Johnson, Bradley Udell, Hadi Charkhgard, Changhyun Kwon
A novel host-adapted strain of Salmonella Typhimurium causes disease in olive ridley turtles (Lepidochelys olivacea) in the Pacific. A novel host-adapted strain of Salmonella Typhimurium causes disease in olive ridley turtles (Lepidochelys olivacea) in the Pacific.
Salmonella spp. are frequently shed by wildlife including turtles, but S. enterica subsp. enterica serovar Typhimurium or lesions associated with Salmonella are rare in turtles. Between 1996 and 2016, we necropsied 127 apparently healthy pelagic olive ridley turtles (Lepidochelys olivacea) that died from drowning bycatch in fisheries and 44 live or freshly dead stranded turtles from the...
Authors
Thierry M. Work, Julie Dagenais, Brian A. Stacy, Jason T. Ladner, Jeffrey M. Lorch, George H. Balazs, Elias Barquero-Calvo, Brenda M. Berlowski-Zier, Renee Breeden, Natalia Corrales-Gomez, Rocio Gonzalez-Barrientos, Heather Harris, Gabriela Hernandez-Mora, Angel Herrera-Ulloa, Shoreh Hesami, T. Todd Jones, Juan Alberto Morales, Terry M. Norton, Robert Rameyer, Daniel Taylor, Thomas B. Waltzek
Synopsis of research programs that can provide baseline and monitoring information for offshore energy activities in the Pacific region: Seabird and marine mammal surveys in the Pacific region Synopsis of research programs that can provide baseline and monitoring information for offshore energy activities in the Pacific region: Seabird and marine mammal surveys in the Pacific region
We assembled and tabulated information about marine bird and mammal research and monitoring programs that could provide data needed to support environmental risk assessments. This included identifying ongoing or completed research programs that contain information on species and habitats sensitive to offshore energy activities and that could provide baseline and monitoring data to...
Authors
Josh Adams, Kevin D. Lafferty, Emily C. Kelsey, Cora A. Johnston
Assessing the chemistry and bioavailability of dissolved organic matter from glaciers and rock glaciers Assessing the chemistry and bioavailability of dissolved organic matter from glaciers and rock glaciers
As glaciers thaw in response to warming, they release dissolved organic matter (DOM) to alpine lakes and streams. The United States contains an abundance of both alpine glaciers and rock glaciers. Differences in DOM composition and bioavailability between glacier types, like rock and ice glaciers, remain undefined. To assess differences in glacier and rock glacier DOM we evaluated...
Authors
Timothy S. Fegel, Claudia M. Boot, Corey D. Broeckling, Jill Baron, Edward K Hall
Trends and carrying capacity of sea otters in Southeast Alaska Trends and carrying capacity of sea otters in Southeast Alaska
Sea otter populations in Southeast Alaska (SEAK) have increased dramatically from fewer than 500 translocated animals in the late 1960s. The recovery of sea otters to ecosystems from which they had been absent has affected coastal food webs, including commercially important fisheries, and thus information on expected growth and equilibrium abundances can help inform resource management...
Authors
M. Tim Tinker, Verena A. Gill, George G. Esslinger, James L. Bodkin, Melissa Monk, Marc Mangel, Daniel Monson, Wendel W. Raymond, Michelle Kissling
Predicting attenuation of salinized surface- and groundwater-resources from legacy energy development in the Prairie Pothole Region Predicting attenuation of salinized surface- and groundwater-resources from legacy energy development in the Prairie Pothole Region
Oil and gas (energy) development in the Williston Basin, which partly underlies the Prairie Pothole Region in central North America, has helped meet U.S. energy demand for decades. Historical handling and disposal practices of saline wastewater co-produced during energy development resulted in salinization of surface and groundwater at numerous legacy energy sites. Thirty years of...
Authors
Todd M. Preston, Chauncey W. Anderson, Joanna N. Thamke, Blake R. Hossack, Katherine Skalak, Isabelle M. Cozzarelli
By
Ecosystems Mission Area, Water Resources Mission Area, Contaminant Biology, Environmental Health Program, Groundwater and Streamflow Information Program, Toxic Substances Hydrology, Fort Collins Science Center, Northern Rocky Mountain Science Center, Oregon Water Science Center, Wyoming-Montana Water Science Center, Reston Biogeochemical Processes in Groundwater Laboratory
Plague positive mouse fleas on mice prior to plague outbreaks in black-tailed and white-tailed prairie dogs Plague positive mouse fleas on mice prior to plague outbreaks in black-tailed and white-tailed prairie dogs
Plague is a lethal zoonotic disease associated with rodents worldwide. In the western United States, plague outbreaks can decimate prairie dog (Cynomys spp.) colonies. However, it is unclear where the causative agent, Yersinia pestis, of this flea-borne disease is maintained between outbreaks, and what triggers plague-induced prairie dog die-offs. Less susceptible rodent hosts, such as...
Authors
Gebbiena M. Bron, Carly Malave, Jesse T. Boulerice, Jorge E. Osorio, Tonie E. Rocke
First record of the non-indigenous parasitic copepod Neoergasilus japonicus (Harada, 1950) in the Lake Ontario Watershed: Oneida Lake, New York First record of the non-indigenous parasitic copepod Neoergasilus japonicus (Harada, 1950) in the Lake Ontario Watershed: Oneida Lake, New York
Four specimens of the Asiatic parasitic copepod Neoergasilus japonicus (Harada, 1930) were collected from Oneida Lake, New York in September 2018; one specimen was from a white sucker Catostomus commersonii, another from a green sunfish Lepomis cyanellus, and two from a bluegill Lepomis macrochirus. The four adult female specimens were found attached to the base of the gills of their...
Authors
Chris C. Marshall, Patrick Hudson, J. Randy Jackson, Joe K. Connolly, Jim M Watkins, Lars G. Rudstam
Integrating behavior and physiology into strategies for amphibian conservation Integrating behavior and physiology into strategies for amphibian conservation
The amphibian decline crisis has been challenging to address because of the complexity of factors—and their multitude of interactive effects—that drive this global issue. Dissecting such complexity could benefit from strategies that integrate multiple disciplines and address the mechanistic underpinnings of population declines and extirpations. We examine how the disciplines of behavior...
Authors
Susan Walls, Caitlin R Gabor
Establishing genome sizes of focal fishery and aquaculture species along Baja California, Mexico Establishing genome sizes of focal fishery and aquaculture species along Baja California, Mexico
Genome size—the total haploid content of nuclear DNA— is constant in all cells in individuals within a species, but differs among species. Consequently, the genome size is a quantifiable genetic signature that not only characterizes a species, but it can reflect chromatin modifications, which play fundamental roles in most biological processes that are involved in the manipulation and...
Authors
Constanza del Mar Ochoa-Saloma, Jill A. Jenkins, Manuel A. Segovia, Miguel A. Del Rio-Portilla, Carmen G. Paniagua-Chavez
Carbon dioxide emissions and methane flux from forested wetland soils of the Great Dismal Swamp, USA Carbon dioxide emissions and methane flux from forested wetland soils of the Great Dismal Swamp, USA
The Great Dismal Swamp, a freshwater forested peatland, has accumulated massive amounts of soil carbon since the postglacial period. Logging and draining have severely altered the hydrology and forest composition, leading to drier soils, accelerated oxidation, and vulnerability to disturbance. The once dominant Atlantic white cedar, cypress, and pocosin forest types are now fragmented...
Authors
Laurel Gutenberg, K. W. Krauss, John Qu, Changwoo Ahn, Dianna M. Hogan, Zhiliang Zhu, Chenyang Xu
Shorebird subsistence harvest and indigenous knowledge in Alaska: Informing harvest assessment and management, and engaging users in shorebird conservation Shorebird subsistence harvest and indigenous knowledge in Alaska: Informing harvest assessment and management, and engaging users in shorebird conservation
Limited data on harvest and population parameters are major impediments to assess shorebird harvest sustainability. Because of sharp declines in shorebird populations, timely conservation efforts require approaches that account for uncertainty in harvest sustainability. We combined harvest assessment and ethnographic research to better understand shorebird conservation concerns related...
Authors
Naves. Liliana, Jacqueline Keating, T. Lee Tibbitts, Daniel R. Ruthrauff