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Browse more than 65,000 articles authored by our scientists over the past 100+ year history of the USGS and refine search by topic, location, year, and advanced search.

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Light and flow regimes regulate the metabolism of rivers Light and flow regimes regulate the metabolism of rivers

Mean annual temperature and mean annual precipitation drive much of the variation in productivity across Earth's terrestrial ecosystems but do not explain variation in gross primary productivity (GPP) or ecosystem respiration (ER) in flowing waters. We document substantial variation in the magnitude and seasonality of GPP and ER across 222 US rivers. In contrast to their terrestrial...
Authors
Emily. S Bernhardt, Philip Savoy, Michael J Vlah, Alison Paige Appling, Lauren E Koenig, Robert O Hall Jr., Maite Arroita, Joanna Blaszczak, Alice M. Carter, Matthew J. Cohen, Judson Harvey, James B. Heffernan, Ashley M. Helton, J.D. Hosen, Lily Kirk, William H. McDowell, Emily H. Stanley, Charles B. Yackulic, Nancy B. Grimm

Smoothed Particle Hydrodynamics simulations of reef surf zone processes driven by plunging irregular waves Smoothed Particle Hydrodynamics simulations of reef surf zone processes driven by plunging irregular waves

As waves interact with the slopes of coral reefs and other steep bathymetry profiles, plunging breaking usually occurs where the free surface overturns and violent water motion is triggered. Resolving these surf zone processes pose significant challenges for conventional mesh-based hydrodynamic models, due to the rapidly-deforming nature of the free surface and associated flows. Yet the...
Authors
Ryan J. Lowe, C. Altomare, Mark L. Buckley, Renan F. da Silva, Jeff E. Hansen, Dirk P. Rijnsdorp, J.M. Dominguez, A.J.C. Crespo

Immunological evidence of variation in exposure and immune response to Bacillus anthracis in herbivores of Kruger and Etosha National Parks Immunological evidence of variation in exposure and immune response to Bacillus anthracis in herbivores of Kruger and Etosha National Parks

Exposure and immunity to generalist pathogens differ among host species and vary across spatial scales. Anthrax, caused by a multi-host bacterial pathogen, Bacillus anthracis, is enzootic in Kruger National Park (KNP), South Africa and Etosha National Park (ENP), Namibia. These parks share many of the same potential host species, yet the main anthrax host in one (greater kudu...
Authors
Sunday O. Ochai, Jan E. Crafford, Ayesha Hassim, Charles Byaruhanga, Yen-Hua Huang, Axel Hartmann, Edgar H. Dekker, O. Louis van Schalkwyk, Pauline L. Kamath, Wendy Christine Turner, Henriette van Heerden

Observation-constrained multicycle dynamic models of the southern San Andreas and the northern San Jacinto Faults: Addressing complexity in paleoearthquake extent and recurrence with realistic 2D fault geometry Observation-constrained multicycle dynamic models of the southern San Andreas and the northern San Jacinto Faults: Addressing complexity in paleoearthquake extent and recurrence with realistic 2D fault geometry

Understanding mechanical conditions that lead to complexity in earthquakes is important to seismic hazard analysis. In this study, we simulate physics-based multicycle dynamic models of the San Andreas fault (Carrizo through San Bernardino sections) and the San Jacinto fault (Claremont and Clark strands). We focus on a complex fault geometry based on the Southern California Earthquake...
Authors
Dunyu Liu, Benchuan Duan, Katherine M. Scharer, Doug Yule

Trends in volcano seismology: 2010 to 2020 and beyond Trends in volcano seismology: 2010 to 2020 and beyond

Volcano seismology has been fundamental to our current understanding of crustal magma migration and eruption. The increasing availability of portable seismic networks with the creative use of seismic sources and ambient noise has led to a better understanding of the volcanic structure of many volcanoes and is producing increasingly detailed images of the volcanic subsurface. The past...
Authors
Weston Thelen, Robin Matoza, Alicia J. Hotovec-Ellis

Parcel-level risk affects wildfire outcomes: Insights from pre-fire rapid assessment data for homes destroyed in 2020 East Troublesome Fire Parcel-level risk affects wildfire outcomes: Insights from pre-fire rapid assessment data for homes destroyed in 2020 East Troublesome Fire

Parcel-level risk (PLR) describes how wildfire risk varies from home to home based on characteristics that relate to likely fire behavior, the susceptibility of homes to fire, and the ability of firefighters to safely access properties. Here, we describe the WiRē Rapid Assessment (RA), a parcel-level rapid wildfire risk assessment tool designed to evaluate PLR with a small set of...
Authors
James R. Meldrum, Christopher M. Barth, Julia B. Goolsby, Schelly K. Olson, Adam C. Gosey, James (Brad) White, Hannah Brenkert-Smith, Patricia A. Champ, Jamie Gomez

Novel genome characteristics contribute to the invasiveness of Phragmites australis (common reed) Novel genome characteristics contribute to the invasiveness of Phragmites australis (common reed)

The rapid invasion of the non-native Phragmites australis (Poaceae, subfamily Arundinoideae) is a major threat to native wetland ecosystems in North America and elsewhere. We describe the first reference genome for P. australis and compare invasive (ssp. australis) and native (ssp. americanus) genotypes collected from replicated populations across the Laurentian Great Lakes to deduce...
Authors
Dong-Ha Oh, Kurt P. Kowalski, Quynh Quach, Chathura Wijesinghege, Philippa Tanford, Maheshi Dassanayake, Keith Clay

Epidemiological differences between sexes affect management efficacy in simulated chronic wasting disease systems Epidemiological differences between sexes affect management efficacy in simulated chronic wasting disease systems

Sex-based differences in physiology, behaviour and demography commonly result in differences in disease prevalence. However, sex differences in prevalence may reflect exposure rather than transmission, which could affect disease control programmes. One potential example is chronic wasting disease (CWD), which has been observed at greater prevalence among male than female deer.We used an...
Authors
William J. Rogers, Ellen E. Brandell, Paul C. Cross

Population structure, intergroup interaction, and human contact govern infectious disease impacts in mountain gorilla populations Population structure, intergroup interaction, and human contact govern infectious disease impacts in mountain gorilla populations

Infectious zoonotic diseases are a threat to wildlife conservation and global health. They are especially a concern for wild apes, which are vulnerable to many human infectious diseases. As ecotourism, deforestation, and great ape field research increase, the threat of human-sourced infections to wild populations becomes more substantial and could result in devastating population...
Authors
Christopher A. Whittier, Felicia B. Nutter, Philip L. F. Johnson, Paul C. Cross, James O. Lloyd-Smith, Barrett D. Slenning, Michael K. Stoskopf

Variation in foraging patterns as reflected by floral resources used by male vs female bees of selected species at Badlands National Park, SD Variation in foraging patterns as reflected by floral resources used by male vs female bees of selected species at Badlands National Park, SD

Female and male bees forage for different reasons: females provision nests with pollen appropriate for larval development and consume nectar for energy while males need only fuel their own energetic requirements. The expectation, therefore, is that females should visit fewer floral resource species than males, due to females’ focus on host plant species and their tie to the nest location...
Authors
Diane L. Larson, Zachary M. Portman, Jennifer Larson, Deborah A. Buhl

Stable isotopes provide insight into sources and cycling of N compounds in the Sacramento-San Joaquin Delta, California, USA Stable isotopes provide insight into sources and cycling of N compounds in the Sacramento-San Joaquin Delta, California, USA

River deltas and their diverse array of aquatic environments are increasingly impacted by anthropogenic inputs of nitrogen (N). These inputs can alter the N biogeochemistry of these systems and promote undesirable phenomena including harmful algae blooms and invasive aquatic macrophytes. To examine N sources and biogeochemical processes in the Sacramento-San Joaquin Delta, a river delta...
Authors
Joseph K. Fackrell, Tamara E. C. Kraus, Megan B. Young, Carol Kendall, Sara Peek

Diverse native island flora shows rapid initial passive recovery after exotic herbivore removal on Santa Rosa Island, California Diverse native island flora shows rapid initial passive recovery after exotic herbivore removal on Santa Rosa Island, California

Removing exotic vertebrates from islands is an increasingly common and potentially effective strategy for protecting biodiversity. Yet, surprisingly few studies evaluate large-scale effects of island removals on native plants. We surveyed 431 hectares of habitat in 7 canyons on Santa Rosa Island just after exotic herbivore control began (1994–1996), and again after two herbivore species...
Authors
Diane M Thomson, Kathryn McEachern, Emily L Schultz, Kenneth G. Niessen, Dieter Wilken, Katherine A. Chess, Lauren F Cole, Ruth Y Oliver, Jennifer D Phillips, Acadia Tucker
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