Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42730
Identifying invertebrate indicators for streamflow duration assessments in forested headwater streams Identifying invertebrate indicators for streamflow duration assessments in forested headwater streams
Streamflow-duration assessment methods (SDAMs) are rapid, indicator-based tools for classifying streamflow duration (e.g., intermittent vs perennial flow) at the reach scale. Indicators are easily assessed stream properties used as surrogates of flow duration, which is too resource intensive to measure directly for many reaches. Invertebrates are commonly used as SDAM indicators because...
Authors
Ken M. Fritz, Roxolana O. Kashuba, Gregory J. Pond, Jay R. Christensen, Laurie C. Alexander, Benjamin J. Washington, Brent R. Johnson, David Walters, William T. Thoeny, Paul C. Weaver
Estimating proximity effects to wildfire fuels treatments on house prices in Cibola National Forest, New Mexico, USA Estimating proximity effects to wildfire fuels treatments on house prices in Cibola National Forest, New Mexico, USA
Forested landscapes in the Western United States are subject to growing size and severity of wildfires, in part due to historical management strategies focusing on wildfire suppression. Forest restoration treatments and fuels reductions, including thinning and prescribed burning, can reduce the frequency and intensity of wildfires. Extensive restoration and fuels treatment efforts are...
Authors
Ryan A. Fitch, Julie M. Mueller, James Meldrum, Christopher Huber
Global assessment of marine plastic exposure for oceanic birds Global assessment of marine plastic exposure for oceanic birds
Plastic pollution is distributed patchily around the world’s oceans. Likewise, marine organisms that are vulnerable to plastic ingestion or entanglement have uneven distributions. Understanding where wildlife encounters plastic is crucial for targeting research and mitigation. Oceanic seabirds, particularly petrels, frequently ingest plastic, are highly threatened, and cover vast...
Authors
Bethany L. Clark, Ana P. B. Carneiro, Elizabeth J. Pearmin, Marie-Morgane Rouyer, Thomas A Clay, Win Cowger, Richard A. Phillips, Andrea Manica, Carolina Hazin, Marcus Eriksen, Jacob Gonzalez-Solis, Josh Adams, Yuri V. Albores-Barajas, Joanna Alfaro-Shigueto, Maria Saldhanha Alho, Deusa Teixeira Araujo, Jose Manuel Arcos, John P. Y. Arnould, Nadito J. P. Barbosa, Christophe Barbraud, Annalea M. Beard, Jessie Beck, Elizabeth Bell, Della G. Bennet, Maud Berlincourt, Manuel Biscoito, Oskar K. Bjornstad, Mark Bolton, Katherine A. Booth Jones, John J. Borg, Karen Bourgeois, Vincent Bretagnolle, Joel Bried, James V. Briskie, M. de L. Brooke, Katherine C. Brownlie, Leandro Bugoni, Licia Calabrese, Letizia Campioni, Mark J. Carey, Ryan D. Carle, Nicholas Carlile, Ana R. Carreiro, Paulo Catry, Teresa Catry, Jacopo G. Cecere, Filipe R. Ceia, Yves Cherel, Chang-Yong Choi, Marco Cianchetti-Benedetti, Rohan H. Clarke, Jaimie Cleeland, Valentina Colodro, Bradley C. Congdon, Johannis Danielsen, Federico De Pascalis, Zoe Deakin, Nina Dehnhard, Giacomo Dell’Omo, Karine Delord, Sebastien Descamps, Ben J. Dilley, Herculano A. Dinis, Jerome Dubos, Brendon J. Dunphy, Louise M. Emmerson, Ana Isabel Fagundes, Annette L. Fayet, Jonathan J. Felis, Johannes H. Fischer, Amanda Freeman, Aymeric Fromant, Giorgia Gaibani, David Garcia, Carina Gjerdrum, Ivandra Soeli Goncalves Correia Gomes, Manuela G. Forero, Jose Pedro Granadeiro, W. James Grecian, David Gremillet, Tim Guilford, Gunnar Thor Hallgrimsson, Luke R. Halpin, Erpur Snaer Hansen, April Hedd, Morten Helberg, Halfdan H. Helgason, Leeann M. Henry, Hannah F. R. Hereward, Marcos Hernandez-Montero, Mark A. Hindell, Peter J. Hodum, Simona Imperio, Audrey Jaeger, Mark Jessopp, Patrick G.R. Jodice, Carl G. Jones, Christopher W. Jones, Jon Einar Jonsson, Adam Kane, Sven Kapelj, Yuna Kim, Holly Kirk, Yann Kolbeinsson, Philipp L. Kraemer, Lucas Kruger, Paulo Lago, Todd J. Landers, Jennifer L. Lavers, Matthieu Le Corre, Andreia Leal, Maite Louzao, Jeremy Madeiros, Maria Magalhaes, Mark L. Mallory, Juan F. Masello, Bruno Massa, Sakiko Matsumoto, Fiona McDuie, Laura McFarlane Tranquilla, Fernando Medrano, Benjamin J. Metzger, Teresa Militao, William A. Montevecchi, Rosalinda C. Montone, Leia Navarro-Herrero, Veronica C. Neves, David G. Nicholls, Malcolm A. C. Nicoll, Ken Norris, Steffen Oppel, Daniel Oro, Ellie Owen, Oliver Padget, Vitor H. Paiva, David Pala, Jorge M. Pereira, Clara Peron, Maria V. Petry, Admilton de Pina, Ariete T. Moreira Pina, Patrick Pinet, Pierre A. Pistorius, Ingrid L. Pollet, Benjamin J. Porter, Timothee A. Poupart, Christopher D. L. Powell, Carolina B. Proano, Julia Pujol-Casado, Petra Quillfeldt, John L. Quinn, Andre F. Raine, Helen Raine, Iván Ramírez, Jaime A. Ramos, Raul Ramos, Andreas Ravache, Matt J. Rayner, Timothy A. Reid, Gregory J. Robertson, Gerard J. Rocamora, Dominic P. Rollinson, Robert A. Ronconi, Andreu Rotger, Diego Rubolini, Kevin Ruhomaun, Asuncion Ruiz, James C. Russell, Peter G. Ryan, Sarah Saldanha, Ana Sanz-Aguilar, Mariona Sarda-Serra, Yvan G. Satge, Katsufumi Sato, Wiebke C. Schafer, Stefan Schoombie, Scott A. Shaffer, Nirmal Jivan Shah, Akiko Shoji, Dave Shutler, Ingvar A. Sigurdsson, Monica C. Silva, Alison E. Small, Cecilia Soldatini, Hallvard Strom, Christopher A. Surman, Akinori Takahashi, Vikash R. V. Tatayah, Graeme A. Taylor, Robert J. Thomas, David R. Thompson, Paul M. Thompson, Thorkell L. Thorarinsson, Diego Vicente-Sastre, Eric Vidal, Ewan D. Wakefield, Susan M. Waugh, Henri Weimerskirch, Heiko U. Wittmer, Takashi Yamamoto, Ken Yoda, Carlos B. Zavalaga, Francis J. Zino, Maria P. Dias
Seasonal habitat utilization provides evidence for site fidelity during both spawn and non-spawning seasons in Lake Ontario cisco Coregonus artedi Seasonal habitat utilization provides evidence for site fidelity during both spawn and non-spawning seasons in Lake Ontario cisco Coregonus artedi
The Lake Ontario cisco Coregonus artedi population declined in the 20th century, and restoration of this species is a management objective. Management tools to restore cisco are limited because little is known about cisco spawning behavior and habitat use. We tagged 76 cisco from a remnant population in Chaumont Bay, Lake Ontario with acoustic transmitters and characterized seasonal...
Authors
Alexander J. Gatch, Dimitry Gorsky, Brian Weidel, Zy F. Biesinger, Michael J. Connerton, Cameron Davis, Hannah Lachance, Brian O’Malley
Presence of hummock and hollow microtopography reflects shifting balances of shallow subsidence and root zone expansion along forested wetland river gradients Presence of hummock and hollow microtopography reflects shifting balances of shallow subsidence and root zone expansion along forested wetland river gradients
Tidal freshwater forested wetlands (TFFWs) are in an active phase of transition to tidal marsh with sea level rise and salinity incursion along the Atlantic and Gulf Coasts of the United States (U.S.). A prominent feature of TFFWs is hummock/hollow microtopography where hollows represent the flat, base-elevation of the floodplain where inundation occurs relatively frequently, while...
Authors
Ken Krauss, Gregory E. Noe, Jamie A. Duberstein, Nicole Cormier, Andrew From, Thomas Rossiter Doody, William H. Conner, Donald Cahoon, Darren Johnson
Validation of a species-specific probe-based qPCR assay for the threatened meltwater stonefly, Lednia tumana, in environmental samples Validation of a species-specific probe-based qPCR assay for the threatened meltwater stonefly, Lednia tumana, in environmental samples
A probe-based quantitative real-time PCR assay was developed to detect meltwater stonefly (Lednia tumana) environmental (e)DNA in water samples. The limits of detection and quantification, respectively, were 12.1 and 58.4 gene copies for calibration standards and these values were similarly low in a relevant environmental sample matrix (8.6 and 174.2, respectively). The assay’s utility...
Authors
Patrick Ross Hutchins, Jonathan Giersch, Adam Sepulveda, Clint C. Muhlfeld
Development of a quantitative PCR assay for detecting northwest salamander (ambystoma gracile) in environmental DNA samples Development of a quantitative PCR assay for detecting northwest salamander (ambystoma gracile) in environmental DNA samples
We developed a primer and probe based quantitative PCR assay for use with environmental DNA to detect Northwest salamander (Ambystoma gracile), a species endemic to the temperate Pacific coastal region of North America. The assay targets a region in the mitochondrial DNA (mtDNA) D-loop gene. Tests of the assay were performed in silico (using the NCBI BLAST tool), in vitro (using DNA...
Authors
Marshal S. Hoy, Carl O. Ostberg
Managing an ongoing threat: Bats and white-nose syndrome Managing an ongoing threat: Bats and white-nose syndrome
No abstract available.
Authors
Tricia Lynn Fry, Amy Haeseler, Anne Ballmann, Tonie E. Rocke
2023 Coastal master plan: ICM-wetlands – Submerged aquatic vegetation (SAV) updates 2023 Coastal master plan: ICM-wetlands – Submerged aquatic vegetation (SAV) updates
Submerged aquatic vegetation (SAV) provides critical structural habitat for valuable nekton and wildlife species across coastal ecosystems and can buffer the negative effects of land loss. Landscape change and restoration efforts across coastal Louisiana can impact the occurrence, coverage, and species assemblages of SAV, and changes to these foundational species can have cascading...
Authors
Kristin DeMarco, Donald Schoolmaster, Brady Couvillion
2023 Coastal master plan: Landscape input data 2023 Coastal master plan: Landscape input data
Coastal Louisiana is a complex landscape. The composition of the landscape, as well as the processes which influence said landscape, vary in both space and time. The models used in the 2023 Coastal Master Plan must attempt to reflect that spatial and temporal variability. It is therefore of the utmost importance that the spatial data sets upon which the models are initialized are of the...
Authors
Brady Couvillion
Modeling habitat suitability across different levels of invasive plant abundance Modeling habitat suitability across different levels of invasive plant abundance
Predicting where invasive plants are likely to spread and become abundant is critical for informing invasive plant management. Species distribution models are a key tool for informing the geography of invasion risk, but most distribution models are limited by their use of presence data, including no information on invader population abundance. In this study, we ask how habitat...
Authors
Evelyn M. Beaury, Catherine S. Jarnevich, Ian Pearse, Annette E. Evans, Nathan Teich, Peder Engelstad, Jillian LaRoe, Bethany A. Bradley
Using state-and-transition simulation models to scope post-fire success in restoring greater sage-grouse habitat Using state-and-transition simulation models to scope post-fire success in restoring greater sage-grouse habitat
Wildfires are increasingly modifying wildlife habitat in the western United States and managers need ways to scope the pace and degree to which post-fire restoration actions can re-create habitat in dynamic landscapes. We developed a spatially explicit state-transition simulation model (STSM) to project post-fire revegetation and the potential for sage-grouse habitat restoration in...
Authors
Elizabeth Kari Orning, Julie A. Heinrichs, David A. Pyke, Peter S. Coates, Cameron L. Aldridge