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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42712

Juvenile Chinook Salmon mortality in a Snake River Reservoir: Smallmouth Bass predation revisited Juvenile Chinook Salmon mortality in a Snake River Reservoir: Smallmouth Bass predation revisited

Predation by nonnative fishes has been identified as a contributing factor in the decline of juvenile salmonids in the Columbia River basin. We examined the diet composition of Smallmouth Bass Micropterus dolomieu and estimated the consumption and predation loss of juvenile Chinook Salmon Oncorhynchus tshawytscha in Lower Granite Reservoir on the Snake River. We examined 4,852 Smallmouth...
Authors
John M. Erhardt, Kenneth F. Tiffan, William P. Connor

Size, growth, and size‐selective mortality of subyearling Chinook Salmon during early marine residence in Puget Sound Size, growth, and size‐selective mortality of subyearling Chinook Salmon during early marine residence in Puget Sound

In marine ecosystems, survival can be heavily influenced by size‐selective mortality during juvenile life stages. Understanding how and when size‐selective mortality operates on a population can reveal underlying growth dynamics and size‐selective ecological processes affecting the population and thus can be used to guide conservation efforts. For subyearling Chinook Salmon Oncorhynchus
Authors
Madilyn M. Gamble, Kristin A. Connelly, Jennifer R. Gardner, Joshua W. Chamberlin, Kenneth I. Warheit, David A. Beauchamp

Proximate composition, lipid utilization and validation of a non‐lethal method to determine lipid content in migrating American shad Alosa sapidissima Proximate composition, lipid utilization and validation of a non‐lethal method to determine lipid content in migrating American shad Alosa sapidissima

Lipid content forms the most important energy reserve in anadromous fish and can limit survival, migration and reproductive success. A fat meter was evaluated and compared with a traditional extractive method of measuring available lipid for migrating American shad Alosa sapidissima in the Connecticut River, U.S.A. The fat meter gives rapid (
Authors
Shannon Michael Bayse, Amy M. Regish, Stephen D. McCormick

Phylogeny and species traits predict bird detectability Phylogeny and species traits predict bird detectability

Avian acoustic communication has resulted from evolutionary pressures and ecological constraints. We therefore expect that auditory detectability in birds might be predictable by species traits and phylogenetic relatedness. We evaluated the relationship between phylogeny, species traits, and field‐based estimates of the two processes that determine species detectability (singing rate and...
Authors
Peter Solymos, Steven M. Matsuoka, Diana Stralberg, Nicole K. S. Barker, Erin M. Bayne

Effects of contemporary land-use and land-cover change on the carbon balance of terrestrial ecosystems in the United States Effects of contemporary land-use and land-cover change on the carbon balance of terrestrial ecosystems in the United States

Changes in land use and land cover (LULC) can have profound effects on terrestrial carbon dynamics, yet their effects on the global carbon budget remain uncertain. While land change impacts on ecosystem carbon dynamics have been the focus of numerous studies, few efforts have been based on observational data incorporating multiple ecosystem types spanning large geographic areas over long...
Authors
Benjamin M. Sleeter, Jinxun Liu, Colin Daniel, Bronwyn Rayfield, Jason T. Sherba, Todd Hawbaker, Zhiliang Zhu, Paul Selmants, Thomas R. Loveland

Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America

Following detections of highly pathogenic (HP) influenza A viruses (IAVs) in wild birds inhabiting East Asia after the turn of the millennium, the intensity of sampling of wild birds for IAVs increased throughout much of North America. The objectives for many research and surveillance efforts were directed towards detecting Eurasian origin HP IAVs and understanding the potential of such...
Authors
Andrew M. Ramey, Thomas J. DeLiberto, Yohannes Berhane, David E. Swayne, David E. Stallknecht

Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska

We explored the abundance of antibiotic-resistant Escherichia coli among migratory birds at remote sites in Alaska and used a comparative approach to speculate on plausible explanations for differences in detection among species. At a remote island site, we detected antibiotic-resistant E. coli phenotypes in samples collected from glaucous-winged gulls (Larus glaucescens), a species...
Authors
Andrew M. Ramey, Jorge Hernandez, Veronica Tyrlov, Brian D. Uher-Koch, Joel A. Schmutz, Clara Atterby, Josef D. Jarhult, Jonas Bonnedahl

Mineral constraints on arctic caribou (Rangifer tarandus): a spatial and phenological perspective Mineral constraints on arctic caribou (Rangifer tarandus): a spatial and phenological perspective

Arctic caribou (Rangifer tarandus) have the longest terrestrial migration of any ungulate but little is known about the spatial and seasonal variation of minerals in summer forages and the potential impacts of mineral nutrition on the foraging behavior and nutritional condition of arctic caribou. We investigated the phenology, availability, and mechanistic relationships of calcium...
Authors
K. W. Oster, P.S. Barboza, David D. Gustine, Kyle Joly, R. D. Shively

Risk factors associated with mortality of age-0 Smallmouth Bass in the Susquehanna River basin, Pennsylvania Risk factors associated with mortality of age-0 Smallmouth Bass in the Susquehanna River basin, Pennsylvania

Evidence of disease and mortalities of young of the year (age‐0) Smallmouth Bass Micropterus dolomieu has occurred during the late spring and summer in many parts of the Susquehanna River watershed since 2005. To better understand contributing factors, fish collected from multiple areas throughout the watershed as well as out‐of‐basin reference populations (Allegheny and Delaware River...
Authors
Heather L. Walsh, Vicki S. Blazer, Geoffrey Smith, Michael Lookenbill, David A. Alvarez, Kelly L. Smalling

Hierarchical modeling assessment of the influence of watershed stressors on fish and invertebrate species in Gulf of Mexico estuaries Hierarchical modeling assessment of the influence of watershed stressors on fish and invertebrate species in Gulf of Mexico estuaries

The northern Gulf of Mexico (GoM) spans five U.S. states and encompasses estuaries that vary greatly in size, shape, upstream river input, eutrophication status, and biotic communities. Given the variability among these estuaries, assessing their biological condition relative to anthropogenic stressors is challenging, but important to regional fisheries management and habitat...
Authors
Jonathan Miller, Peter C. Esselman, Ibrahim Alameddine, Kristan Blackhart, Daniel R. Obenour

Modeling habitat for Marbled Murrelets on the Siuslaw National Forest, Oregon, using lidar data Modeling habitat for Marbled Murrelets on the Siuslaw National Forest, Oregon, using lidar data

Habitat models using lidar-derived variables that quantify fine-scale variation in vegetation structure can improve the accuracy of occupancy estimates for canopy-dwelling species over models that use variables derived from other remote sensing techniques. However, the ability of models developed at such a fine spatial scale to maintain accuracy at regional or larger spatial scales has...
Authors
Joan C. Hagar, Ramiro Aragon, Patricia Haggerty, Jeff P. Hollenbeck

Research frontiers for improving our understanding of drought‐induced tree and forest mortality Research frontiers for improving our understanding of drought‐induced tree and forest mortality

Accumulating evidence highlights increased mortality risks for trees during severe drought, particularly under warmer temperatures and increasing vapour pressure deficit (VPD). Resulting forest die‐off events have severe consequences for ecosystem services, biophysical and biogeochemical land–atmosphere processes. Despite advances in monitoring, modelling and experimental studies of the...
Authors
Henrik Hartmann, Catarina Moura, William R. L. Anderegg, Nadine K. Ruehr, Yann Salmon, Craig D. Allen, Stefan K. Arndt, David D. Breshears, Hendrik Davi, David Galbraith, Katinka X. Ruthrof, Jan Wunder, Henry D. Adams, Jasper Bloemen, Maxime Cailleret, Richard Cobb, Arthur Gessler, Thorsten E. E. Grams, Steven Jansen, Markus Kautz, Francisco Lloret, Michael O’Brien
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