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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42701

Resolving the status of the genera Gastrophysus and Geneion in the family Tetraodontidae (Teleostei: Tetraodontiformes) Resolving the status of the genera Gastrophysus and Geneion in the family Tetraodontidae (Teleostei: Tetraodontiformes)

Maintaining a current list of valid names and taxonomy for biodiversity is an ever-increasing challenge for the Integrated Taxonomic Information System (ITIS 2017). Advances in molecular techniques and the discovery of many cryptic taxa have dramatically increased the number of species and resulted in revised interpretation of phylogenetic relationships. Occasionally it is necessary to...
Authors
Howard L. Jelks

Post‐release predation mortality of age‐0 hatchery‐reared Chinook salmon from non‐native smallmouth bass in the Snake River Post‐release predation mortality of age‐0 hatchery‐reared Chinook salmon from non‐native smallmouth bass in the Snake River

Release of age‐0 hatchery‐reared fall Chinook salmon, Oncorhynchus tshawytscha(Walbaum), in the Snake River resulted in up to 30‐fold increases in salmon consumption by non‐native smallmouth bass, Micropterus dolomieu Lacepѐde. In an upper river reach, smallmouth bass fed intensively during a release in May, but Chinook salmon consumption returned to pre‐release levels within 1–2 days as...
Authors
John M. Erhardt, Kenneth F. Tiffan

A diverse suite of pharmaceuticals contaminates stream and riparian food webs A diverse suite of pharmaceuticals contaminates stream and riparian food webs

A multitude of biologically active pharmaceuticals contaminate surface waters globally, yet their presence in aquatic food webs remain largely unknown. Here, we show that over 60 pharmaceutical compounds can be detected in aquatic invertebrates and riparian spiders in six streams near Melbourne, Australia. Similar concentrations in aquatic invertebrate larvae and riparian predators...
Authors
Erinn K. Richmond, Emma J. Rosi, David M. Walters, Jerker Fikk, Stephen K. Hamilton, Tomas Brodin, Anna Sundelin, Michael R. Grace

Prevalence and risk factors of Trichomonas gallinae and trichomonosis in golden eagle (Aquila chrysaetos) nestlings in western North America Prevalence and risk factors of Trichomonas gallinae and trichomonosis in golden eagle (Aquila chrysaetos) nestlings in western North America

Avian trichomonosis, caused by the protozoan Trichomonas gallinae, affects bird-eating raptors worldwide. Raptors can develop trichomonosis by feeding on infected prey, particularly Rock Pigeons (Columba livia), which are a reservoir for T. gallinae. Raptors may be particularly vulnerable to T. gallinae infection in degraded habitats, where changes in resources may cause raptors to...
Authors
Benjamin M Dudek, Michael N. Kochert, Joseph G. Barnes, Peter H. Bloom, Joseph M. Papp, Richard W. Gerhold, Kathryn E. Purple, Kenneth V. Jacobson, Charles R. Preston, Chris R. Vennum, James W. Watson, Julie A. Heath

No flood effect on recruitment of a small Louisiana black bear population No flood effect on recruitment of a small Louisiana black bear population

A flood event in 2011 had minor impacts on apparent survival and movement probabilities of a small, isolated population of Louisiana black bears (Ursus americanus luteolus) in the Upper Atchafalaya River Basin, Louisiana, USA. However, the potential effects of the flood on recruitment of juveniles into the population, then listed as threatened under the United States Endangered Species...
Authors
Joseph D. Clark, Kaitlin C. O’Connell-Goode, Carrie L. Lowe, Sean M. Murphy, Sutton C. Maehr, Maria M. Davidson, Jared S. Laufenberg

Functional and geographic components of risk for climate sensitive vertebrates in the Pacific Northwest, USA Functional and geographic components of risk for climate sensitive vertebrates in the Pacific Northwest, USA

Rarity and life history traits inform multiple dimensions of intrinsic risk to climate and environmental change and can help systematically identify at-risk species. We quantified relative geographic rarity (area of occupancy), climate niche breadth, and life history traits for 114 freshwater fishes, amphibians, and reptiles in the U.S. Pacific Northwest. Our approach leveraged presence...
Authors
Meryl Mims, Deanna H. Olson, David S. Pilliod, Jason B. Dunham

Land mollusks of the California Channel Islands: An overview of diversity, populations, and conservation status Land mollusks of the California Channel Islands: An overview of diversity, populations, and conservation status

The land snails and slugs have the highest level of endemism among all major animal groups on the California Channel Islands, with nearly 75% of the native terrestrial species confined to one or more of the 8 islands. In spite of this endemism, and in spite of the rarity of some species, the snails and slugs are one of the most poorly known groups. We present the first comprehensive...
Authors
Charles A. Drost, Jeffrey C. Nekola, Barry Roth, Timothy A. Pearce

Building a response network to investigate potential pathogens associated with unionid mortality events Building a response network to investigate potential pathogens associated with unionid mortality events

Unexplained mortality events have confounded the mussel conservation community for over 30 years. While the effects of chemical pollutants and environmental factors have been examined, few investigations have focused on the identification of potential mussel pathogens. Consequently, very little is known regarding the impact that pathogens have on freshwater mussel health, especially as...
Authors
Eric Leis, Diane L. Waller, Susan Knowles, Tony Goldberg, Joel G. Putnam, Jordan Richard, Sarah Erickson, Emilie Blevins, Jesse Weinzinger

Identifying opportunities for long-lasting habitat conservation and restoration in Hawaii’s shifting climate Identifying opportunities for long-lasting habitat conservation and restoration in Hawaii’s shifting climate

Conservation efforts in isolated archipelagos such as Hawaii often focus on habitat-based conservation and restoration efforts that benefit multiple species. Unfortunately, identifying locations where such efforts are safer from climatic shifts is still challenging. We aimed to provide a method to approximate these potential habitat shifts for similar data- and research-limited contexts...
Authors
Lucas B. Fortini, James D. Jacobi

Historical patterns of wildfire ignition sources in California ecosystems Historical patterns of wildfire ignition sources in California ecosystems

State and federal agencies have reported fire causes since the early 1900s, explicitly for the purpose of helping land managers design fire-prevention programs. We document fire-ignition patterns in five homogenous climate divisions in California over the past 98 years on state Cal Fire protected lands and 107 years on federal United States Forest Service lands. Throughout the state...
Authors
Jon E. Keeley, Alexandra D. Syphard

Evaluating riparian vegetation change in canyon-bound reaches of the Colorado River using spatially extensive matched photo sets Evaluating riparian vegetation change in canyon-bound reaches of the Colorado River using spatially extensive matched photo sets

Much of what we know about the functional ecology of aquatic and riparian ecosystems comes from work on regulated rivers (Johnson et al. 2012). What little we know about unregulated conditions on many of our larger rivers is often inferred from recollections of individuals, personal diaries, notes, maps, and collections from early scientific surveys (Webb et al. 2007) and from repeat...
Authors
Michael L. Scott, Robert H. Webb, R. Roy Johnson, Raymond M. Turner, Jonathan M. Friedman, Helen C. Fairley

Ontogenetic changes in swimming speed of silver carp, bighead carp, and grass carp larvae: implications for larval dispersal Ontogenetic changes in swimming speed of silver carp, bighead carp, and grass carp larvae: implications for larval dispersal

Bighead, silver, and grass carps are invasive in the waterways of central North America, and grass carp reproduction in tributaries of the Great Lakes has now been documented. Questions about recruitment potential motivate a need for accurate models of egg and larval dispersal. Quantitative data on swimming behaviors and capabilities during early ontogeny are needed to improve these...
Authors
Amy E. George, Tatiana Garcia, Benjamin H. Stahlschmidt, Duane Chapman
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