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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 177638

Flood-frequency estimates for Kentucky streamgages based on data through water year 2021 and results of updating the fundamental layers in Kentucky StreamStats Flood-frequency estimates for Kentucky streamgages based on data through water year 2021 and results of updating the fundamental layers in Kentucky StreamStats

The U.S. Geological Survey, in cooperation with the Kentucky Transportation Cabinet, analyzed flood-frequency statistics for streamgages in Kentucky. Using annual peak-flow data through water year 2021, flood-frequency estimates were computed for 261 streamgages, including unregulated and regulated sites as well as sites with mixed regulation records. Methods followed those outlined in...
Authors
Branden L. VonIns, J. Jeremy Webber, Danielle D. Follette, Thomas G. Jeffords

A weight-of-evidence system for integrating monitoring and environmental indicators to guide biological conservation and resource management of native taxa A weight-of-evidence system for integrating monitoring and environmental indicators to guide biological conservation and resource management of native taxa

Many state and federal environmental management agencies are charged with using data-driven evidence to conserve and restore threatened and endangered species that are adversely impacted by humans. Yet, statistical analyses of available environmental indicator data do not always promote unambiguous, ecologically-meaningful, evidence-based decisions for managing native biota. Here we...
Authors
Olivia Rode, Martha E. Mather, Devon Oliver, Katherine Nelson, Victoria Reed, Trisha Moore, Shelby Kuck

Seasonal estimates of nutrient loading, sources, and impacts on water availability in streams across the conterminous United States, 2000–2020 Seasonal estimates of nutrient loading, sources, and impacts on water availability in streams across the conterminous United States, 2000–2020

Excess riverine nutrients can limit water availability for humans and ecosystems. Nutrient monitoring on individual stream reaches provides important information about current and past conditions, yet most river reaches are unmonitored. Additionally, monitored data integrate effects of upstream sources, sinks, and pathways by which nutrients get into streams, making explicit planning for...
Authors
Olivia L. Miller, Noah M. Schmadel, Scott Ator, Matthew P. Miller, Dale M. Robertson, David A. Saad, Gregory E. Schwarz, Andrew J. Sekellick, Kenneth D. Skinner

Preface to the focus section on environmental seismology Preface to the focus section on environmental seismology

No abstract available.
Authors
Liam Toney, Robert E. Anthony, Michael G. Baker, Thomas Hudson, Zhichao Shen

Transcriptional changes in wild Yukon River Chinook Salmon associated with Ichthyophonus infections Transcriptional changes in wild Yukon River Chinook Salmon associated with Ichthyophonus infections

Objective We compared differentially expressed genes in Chinook Salmon Oncorhynchus tshawytscha with three divergent Ichthyophonus statuses (undetected, subclinical infections, or clinical disease; n = 100) to investigate associated transcriptomic responses. Disease associated with the fish parasite Ichthyophonus sp. was first diagnosed in adult Chinook Salmon from the Yukon River in the...
Authors
Lizabeth Bowen, Vanessa R. von Biela, Jayde A. Ferguson, Shannon C. Waters-Dynes, Amy M. Regish, Michael P. Carey, Zachary Liller, Morag Clinton, Paul Hershberger, Christian E. Zimmerman

Mass mortality of avian migrants in New Mexico, USA, that coincided with an extreme weather event Mass mortality of avian migrants in New Mexico, USA, that coincided with an extreme weather event

Many birds are migratory, and this life history strategy allows for maximized access to seasonally abundant resources and favorable climates. However, migration exposes birds to threats and stressors, resulting in high mortality during migration. Anthropogenic landscape alterations and climate change have intensified threats, and mass mortality events linked to extreme weather are more...
Authors
Dylan M. Osterhaus, Allison J. Salas, Patricia L. Cutler, Mara E. Weisenberger, Kerry Mower, Abigail Jean Lawson, Timothy F. Wright, Jeanne M. Fair, Martha J. Desmond

Review of Bayesian dynamic occupancy models and the implications of incomplete sampling Review of Bayesian dynamic occupancy models and the implications of incomplete sampling

One popular tool for modeling long-term wildlife monitoring data is the dynamic occupancy model. Dynamic occupancy models require detection/non-detection observations recorded during repeated visits to the same site across many seasons. However, sampling all sites repeatedly for multi-year studies is not always possible due to limited funding, sites being difficult to access, the...
Authors
Meaghan Winder, Andrew Hoegh, Adam J. Sepulveda

A sea ice entrapment event in the southern Chukchi Sea: Analysis and prediction A sea ice entrapment event in the southern Chukchi Sea: Analysis and prediction

Amplified Arctic warming is reducing sea ice cover, which is driving an increase in geopolitical interest in the region as it offers the possibility of reducing shipping times between Asia, Europe, and eastern North America, at the risk of increased ice hazards. Here, we examine the case of the Norseman II research ship that was trapped by sea ice in the southern Chukchi Sea for 14 days...
Authors
G. W.K. Moore, Michael A. Steele, Jinlun Zhang, Axel J. Schweiger, Thomas J. Ballinger, Irina S. Trukhanova, Michael Lawson, William S. Beatty, Scott Hameister

Role of volcano-tectonic interactions during early-phase magma-assisted continental rifting Role of volcano-tectonic interactions during early-phase magma-assisted continental rifting

We study volcanic-tectonic interactions during the early phase of rifting in the Natron Rift, a magmatic segment of the East African Rift System. We use the open-source crustal deformation modeling code, PyLith, to model deflation during the 2007–2008 explosive eruptions and inflation during 2016–2023. We compare predictions of surface displacements resulting from magma reservoir...
Authors
Ntambila Daud, D. Sarah Stamps, Brad T. Aagaard, Maurizio Battaglia, Elifuraha Saria, Kang-Hyeun Ji

A practical framework for GT-seq panel optimization A practical framework for GT-seq panel optimization

Genotyping-in-thousands by sequencing (GT-seq) panels are powerful tools in ecological, evolutionary and conservation genomics, yet the optimization process critical for robust and reproducible genotyping remains poorly formalized. Here, we present an iterative workflow for GT-seq panel optimization that emphasizes systematic refinement, quality control and structured decision-making to...
Authors
Chandika RG, Caitlin N. Ott-Conn, Peter T. Euclide, Julie A. Blanchong, Angela Schmoldt, Randy W. DeYoung, Daniel P. Walsh, Wes A. Larson, Emily K. Latch

Loss and transformation of coastal wetlands due to global change in the conterminous United States: Past, present, and future Loss and transformation of coastal wetlands due to global change in the conterminous United States: Past, present, and future

Coastal wetlands are being transformed by global change, impacting the ecological and societal benefits provided by these ecosystems. Synthesizing knowledge of historical and expected future transformations in coastal wetlands can help inform forward-looking planning and stewardship efforts. Here, we review anticipated future ecological transformations in coastal wetlands of the...
Authors
Michael J. Osland, Bogdan Chivoiu, Kevin J. Buffington, Kristin B. Byrd, Joel A. Carr, Judith Z. Drexler, Nicholas M. Enwright, Neil K. Ganju, James B. Grace, Eric E. Grossman, Glenn R. Guntenspergen, Kurt P. Kowalski, Ken W. Krauss, Jessica R. Lacy, Gregory B. Noe, Davina L. Passeri, Stephanie Romanach, Christopher F. Smith, Camille L. Stagg, Karen M. Thorne, Janet R. Keough

Improved estimates of relative occurrence and abundance using opportunistic surveys and presence-only observations: A zero-inflated integrated species distribution model Improved estimates of relative occurrence and abundance using opportunistic surveys and presence-only observations: A zero-inflated integrated species distribution model

Modeling tools for estimating and forecasting shifts in species distributions are becoming increasingly valuable for conservation planning and response. This is especially true for wild bird populations, which have been declining across habitats and regions. Species distribution models (SDM) represent a diverse set of tools with options for addressing various sources of bias. Complex...
Authors
Jennifer Mullinax, Matthew Brandon Gonnerman, Jeffery D. Sullivan, Cody M. Kent, Diann J. Prosser
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