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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Exposure, sensitivity, or adaptive capacity? Reviewing assessments that use only two of three elements of climate change vulnerability Exposure, sensitivity, or adaptive capacity? Reviewing assessments that use only two of three elements of climate change vulnerability

As climate change accelerates, understanding which species are most vulnerable and why they are vulnerable will be vital to inform conservation action. Climate change vulnerability assessments (CCVAs) are tools to assess species' responses to climate change, detect drivers of vulnerability, and inform conservation planning. CCVAs are commonly composed of three elements: exposure...
Authors
Amanda A. Hyman, Erin R. Crone, Abigail Benson, Jason B. Dunham, Abigail Lynch, Laura Thompson, Meryl C. Mims

Understanding the influence of image enhancement on underwater object detection: A quantitative and qualitative study Understanding the influence of image enhancement on underwater object detection: A quantitative and qualitative study

Underwater image enhancement is often perceived as a disadvantageous process to object detection. We propose a novel analysis of the interactions between enhancement and detection, elaborating on the potential of enhancement to improve detection. In particular, we evaluate object detection performance for each individual image rather than across the entire set to allow a direct...
Authors
Ashraf Saleem, Ali Awad, Sidike Paheding, Evan Lucas, Timothy C. Havens, Peter C. Esselman

Metal-rich lacustrine sediments from legacy mining perpetuate copper exposure to aquatic-riparian food webs Metal-rich lacustrine sediments from legacy mining perpetuate copper exposure to aquatic-riparian food webs

Historic copper mining left a legacy of metal-rich tailings resulting in ecological impacts along and within Torch Lake, an area of concern in the Keweenaw Peninsula, Michigan, USA. Given the toxicity of copper to invertebrates, this study assessed the influence of this legacy on present day nearshore aquatic and terrestrial ecosystems. We measured the metal (Co, Cu, Ni, Zn, Cd) and...
Authors
Brittany G. Perrotta, Karen A. Kidd, Kate M. Campbell, Marie Noele Croteau, Tyler Kane, Amy M. Marcarelli, R. Blaine McCleskey, Gordon Paterson, Craig A. Stricker, David Walters

Evaluation of the sensitivity of a federally endangered freshwater mussel (Venustaconcha trabalis) to selected chemicals Evaluation of the sensitivity of a federally endangered freshwater mussel (Venustaconcha trabalis) to selected chemicals

Protection of critically endangered species requires identification of factors limiting their survival and growth. Previous studies have demonstrated that unionid mussels are sensitive to some chemicals and the sensitivity was similar among different taxonomic families and tribes of mussels. However, common species of mussels were generally used in these previous studies; little is known...
Authors
Ning Wang, Chris D. Ivey, Danielle M. Cleveland, James L. Kunz, Rebecca Schapansky, Timothy W. Lane, M. Christopher Barnhart

Holding time or fixative formulation has no obvious effect on histology of Porites evermanni and Montipora capitata Holding time or fixative formulation has no obvious effect on histology of Porites evermanni and Montipora capitata

Collection of coral for histologic examination requires holding of samples in seawater for a time before they are fixed for histologic processing. This could adversely affect the interpretation of morphologic changes during histologic examinations. We evaluated the microscopic morphology of Porites evermanni and Montipora capitata held (0–120 minutes) in seawater prior to fixation in Z...
Authors
Thierry M. Work, Chutimon Singakharn, Amy Webb, Norton Chan, Michelle Dennis

Exposure to the Polychlorinated biphenyl mixture Aroclor 1254 elicits neurological and cardiac developmental effects in early life stage zebrafish (Danio rerio) Exposure to the Polychlorinated biphenyl mixture Aroclor 1254 elicits neurological and cardiac developmental effects in early life stage zebrafish (Danio rerio)

The goal of this study was to compare the bioaccumulation of the PCB mixture Aroclor 1254 in zebrafish to cardiac and neurologic outcomes. The establishment of effect concentrations (ECs) for cardiac and neurotoxic effects of PCBs in early life stage fish is challenging due to a lack of measured PCB concentrations in test media (e.g., fish tissue), the lack of standard exposure methods...
Authors
Corey A. Green, Jeffrey M. Morris, Jason Tyler Magnuson, Rachel Leads, Claire R. Lay, Michel Gielazyn, Lisa Rosman, Daniel Schlenk, Aaron P. Roberts

Navigating new threats: Prey naivete in native mammals Navigating new threats: Prey naivete in native mammals

1. Invasive predators pose a substantial threat to global biodiversity. Native prey species frequently exhibit naïveté to the cues of invasive predators, and this phenomenon may contribute to the disproportionate impact of invasive predators on prey populations. However, not all species exhibit naïveté, which has led to the generation of many hypotheses to explain patterns in prey...
Authors
Rebecca K. McKee, Kristen Hart, Spencer Zeitoune, Robert A. McCleery

Linking fire, food webs, and fish in stream ecosystems Linking fire, food webs, and fish in stream ecosystems

As wildfire regimes shift, resource managers are concerned about potential threats to aquatic ecosystems and the species they support, especially fishes. However, predicting fish responses can be challenging because wildfires affect aquatic ecosystems via multiple pathways. Application of whole-ecosystem approaches, such as food web modeling, can act as heuristic tools that offer...
Authors
David A. Roon, J. Ryan Bellmore, Joseph R. Benjamin, François-Nicolas Robinne, Rebecca L. Flitcroft, Jana Compton, Joseph L. Ebersole, Jason B. Dunham, Kevin D. Bladon

Spatiotemporal synchrony of climate and fire occurrence across North American forests (1750-1880) Spatiotemporal synchrony of climate and fire occurrence across North American forests (1750-1880)

Aim Increasing aridity has driven widespread synchronous fire occurrence in recent decades across North America. The lack of historical (pre-1880) fire records limits our ability to understand long-term continental fire-climate dynamics. The goal of this study is to use tree-ring reconstructions to determine the relationships between spatiotemporal patterns in historical climate and...
Authors
Ellis Margolis, Andreas Paul Wion, John T. Abatzoglou, Lori D. Daniels, Donald A. Falk, Chris Guiterman, James B. Johnston, Kurt F. Kipfmueller, Charles W. Lafon, Rachel A. Loehman, Maggie Lonergan, Cameron E. Naficy, Marc-Andre Parisien, Sean Parks, Jeanne Portier, Michael C. Stambaugh, Ellen Whitman, A. Park Williams, Larissa Yocom

Evaluating a simulation-based wildfire burn probability map for the conterminous US Evaluating a simulation-based wildfire burn probability map for the conterminous US

Background Wildfire simulation models are used to derive maps of burn probability (BP) based on fuels, weather, topography and ignition locations, and BP maps are key components of wildfire risk assessments. Aims Few studies have compared BP maps with real-world fires to evaluate their suitability for near-future risk assessment. Here, we evaluated a BP map for the conterminous US based...
Authors
Amanda Renee Carlson, Todd Hawbaker, Lucas Bair, Chad Michael Hoffman, James Meldrum, L. Scott Baggett, Paul F. Steblein

Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal

The Sandusky River, Ohio, USA, has experienced more than a century of alterations, including dam implementation and removal, causing a cascade of habitat changes. The physical changes in the river led to establishment of several invasive species. Ten hoop-net sampling sites, spaced about 500 m apart were established in the river to monitor fish assemblage and their habitat preferences...
Authors
Kailee Amanda Schulz, Matthew Ross Acre, Andrew T. Mueller, James J. Wamboldt, Dustin Broaddus, Tyler Hessler, Tammy Michelle Wilson, Robert L. Mapes, Jon Amberg, Robin D. Calfee

Statistical review of systematic reconnaissance flight (SRF) surveys (2008-2023) for monitoring American alligator (Alligator mississippiensis) nests in Everglades National Park Statistical review of systematic reconnaissance flight (SRF) surveys (2008-2023) for monitoring American alligator (Alligator mississippiensis) nests in Everglades National Park

We reviewed current (2008-2023) protocols for monitoring American alligator nests in Everglades National Park (ENP) using a qualitative statistical review framework that emphasizes connecting measurable objectives with evaluation of survey design elements. Our review outlined the statistical assumptions that, if severely violated, would prevent defensible inferences from being drawn...
Authors
Camille Julia Rieber, Kathryn Irvine, Tylan Dean, Kelly McCaffrey, Mark Parry, Bradley A. Strickland
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