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Publications

This list of Water Resources Mission Area publications includes both official USGS publications and journal articles authored by our scientists. A searchable database of all USGS publications can be accessed at the USGS Publications Warehouse.

Filter Total Items: 19017

qPCR-based phytoplankton abundance and chlorophyll a: A multi-year study in twelve large freshwater rivers across the United States qPCR-based phytoplankton abundance and chlorophyll a: A multi-year study in twelve large freshwater rivers across the United States

Phytoplankton overgrowth, which characterizes the eutrophication or trophic status of surface water bodies, threatens ecosystems and public health. Quantitative polymerase chain reaction (qPCR) is promising for assessing the abundance and community composition of phytoplankton. However, applications of qPCR to indicate eutrophication and trophic status, especially in lotic systems, have...
Authors
Chiqian Zhang, Kyle D. McIntosh, N. Sienkiewicz, Erin A. Stelzer, Jennifer L. Graham, Jingrang Lu

Evaluating a process-guided deep learning approach for predicting dissolved oxygen in streams Evaluating a process-guided deep learning approach for predicting dissolved oxygen in streams

Dissolved oxygen (DO) is a critical water quality constituent that governs habitat suitability for aquatic biota, biogeochemical reactions and solubility of metals in streams. Recently introduced high-frequency sensors have increased our ability to measure DO, but we still lack the capacity to understand and predict DO concentrations at high spatial resolutions or in unmonitored...
Authors
Jeffrey M Sadler, Lauren Elizabeth Koenig, Galen Gorski, Alice M. Carter, Robert O. Hall

Ambient flow and transport in long-screened, sand-packed wells: Insights into cross contamination and wellbore flow Ambient flow and transport in long-screened, sand-packed wells: Insights into cross contamination and wellbore flow

The presence of long-screened wells with a surrounding sand pack can have a major effect on the redistribution of contaminants in groundwater, particularly when the wells are set in low-hydraulic conductivity aquifers. Such redistribution, or cross contamination, can occur through vertical flow and advective transport or by in-well mixing via multiple non-advective transport processes. A...
Authors
Philip Harte, Christopher Palumbo Ely, Nicholas F. Teague, Nicole C. Fenton, Anthony A. Brown

Quantifying aspect-dependent snowpack response to high-elevation wildfire in the southern Rocky Mountains Quantifying aspect-dependent snowpack response to high-elevation wildfire in the southern Rocky Mountains

Increasing wildfire frequency and severity in high-elevation seasonal snow zones presents a considerable water resource management challenge across the western United States (U.S.). Wildfires can affect snowpack accumulation and melt patterns, altering the quantity and timing of runoff. While prior research has shown that wildfire generally increases snow melt rates and advances snow...
Authors
Wyatt Reis, Daniel McGrath, Kelly Elder, Stephanie Kampf, David M. Rey

Using a time-of-travel sampling approach to quantify per- and polyfluoroalkyl substances (PFAS) stream loading and source inputs in a mixed-source, urban catchment Using a time-of-travel sampling approach to quantify per- and polyfluoroalkyl substances (PFAS) stream loading and source inputs in a mixed-source, urban catchment

Understanding per- and polyfluoroalkyl substances (PFAS) mass distribution in surface and groundwater systems can support source prioritization, load reduction, and water management. Thirteen sites within an urban catchment were sampled utilizing a time-of-travel sampling approach to minimize the influence of subdaily fluctuations in mass from PFAS point sources and to quantify PFAS and...
Authors
Emily Woodward, Lisa A. Senior, Jacob Fleck, Larry B. Barber, Angela Hansen, Joseph W. Duris

Per- and polyfluoroalkyl substances (PFAS) in drinking water in Southeast Los Angeles: Industrial legacy and environmental justice Per- and polyfluoroalkyl substances (PFAS) in drinking water in Southeast Los Angeles: Industrial legacy and environmental justice

Per- and polyfluoroalkyl substances (PFAS) are persistent chemicals of increasing concern to human health. PFAS contamination in water systems has been linked to a variety of sources including hydrocarbon fire suppression activities, industrial and military land uses, agricultural applications of biosolids, and consumer products. To assess PFAS in California tap water, we collected 60...
Authors
Julie Von Behren, Peggy Reynolds, Paul M. Bradley, James L. Gray, Dana W. Kolpin, Kristin M. Romanok, Kelly Smalling, Catherine Carpenter, Wendy Avila, Paul B. English, Rena R. Jones, Gina Solomon

Estimating the benefits of floodplain restoration to juvenile Chinook salmon in the upper San Francisco Estuary, United States, under future climate scenarios Estimating the benefits of floodplain restoration to juvenile Chinook salmon in the upper San Francisco Estuary, United States, under future climate scenarios

Many river systems within the Central Valley of California have been disconnected from their floodplains, hypothesized to be partially responsible for declining Chinook salmon populations (Oncorhynchus tshawytscha). The primary floodplain of the system, Yolo By-Pass (known regionally as “Yolo Bypass”), offered an opportunity to examine whether improved connectivity between the floodplain...
Authors
Brock M. Huntsman, Marissa L. Wulff, Noah Knowles, Ted Sommer, Frederick V. Feyrer, Larry R. Brown

U.S. Geological Survey climate science plan—Future research directions U.S. Geological Survey climate science plan—Future research directions

Executive Summary Climate is the primary driver of environmental change and is a key consideration in defining science priorities conducted across all mission areas in the U.S. Geological Survey (USGS). Recognizing the importance of climate change to its future research agenda, the USGS’s Climate Science Steering Committee requested the development of a Climate Science Plan to identify...
Authors
Tamara Wilson, Ryan P. Boyles, Nicole DeCrappeo, Judith Z. Drexler, Kevin D. Kroeger, Rachel A. Loehman, John M. Pearce, Mark P. Waldrop, Peter D. Warwick, Anne M. Wein, Sara L. Zeigler, Beard

Design, development, and implementation of IsoBank: A centralized repository for isotopic data Design, development, and implementation of IsoBank: A centralized repository for isotopic data

Stable isotope data have made pivotal contributions to nearly every discipline of the physical and natural sciences. As the generation and application of stable isotope data continues to grow exponentially, so does the need for a unifying data repository to improve accessibility and promote collaborative engagement. This paper provides an overview of the design, development, and...
Authors
Oliver N. Shipley, Anna J. Dabrowski, Gabriel J. Bowen, Brian Hayden, Jonathan N. Pauli, Christopher Jordan, Lesleigh Anderson, Adriana Bailey, Clement P. Bataille, Carla Cicero, Hilary G. Close, Craig Cook, Joseph A. Cook, Ankur R. Desai, Jaivime Evaristo, Tim R. Filley, Christine France, Sora Lee Kim, Sebastian H. Kopf, Julie Loisel, Philip J. Manlick, Jamie M. McFarlin, Bailey C. McMeans, Tamsin C. O’Connel, Brice X. Semmens, Chris Stantis, Paul Szejner, Suzanne E. Pilaar Birch, Annie L. Putman, Craig A. Stricker, Tara L.E. Trammell, Mark D. Uhen, Samantha Weintraub-Leff, Matthew J. Wooller, John W. Williams, Christopher T. Yarnes, Hanna B. Vander Zanden, Seth D. Newsome

Three-dimensional geologic framework model of the Rio San Jose groundwater basin and adjacent areas, New Mexico Three-dimensional geologic framework model of the Rio San Jose groundwater basin and adjacent areas, New Mexico

As part of a U.S. Geological Survey study in cooperation with the Bureau of Reclamation and the Pueblo of Acoma, New Mexico, and the Pueblo of Laguna, New Mexico, a digital three-dimensional geologic framework model was constructed for the Rio San Jose and its surface-water drainage basin in west-central New Mexico. This three-dimensional model defines the altitude, thickness, and extent...
Authors
Donald S. Sweetkind, Amy E. Galanter

Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection (MassDEP), began a study in 2018 to develop a water-quality monitoring strategy (WQMS) for Mount Hope Bay and the Taunton River Estuary in southeastern Massachusetts. MassDEP is interested in water-quality data in Mount Hope Bay and the Taunton River Estuary to characterize current...
Authors
David S. Armstrong

June 2022 floods in the Upper Yellowstone River Basin June 2022 floods in the Upper Yellowstone River Basin

Extraordinary floods surged down the Yellowstone River and its tributaries in northwestern Wyoming and south-central Montana on June 13–15, 2022. During the flood, U.S. Geological Survey staff worked to maintain real-time data from streamgages by making field measurements of streamflow and repairing damaged equipment while communicating the latest streamflow information with the public...
Authors
Katherine J. Chase, DeAnn Dutton, William B. Hamilton, Seth A. Siefken, Cassidy Vander Voort, Aroscott Whiteman
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