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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175030

Climate change and collapsing thermal niches of desert reptiles and amphibians: Assisted migration and acclimation rescue from extirpation Climate change and collapsing thermal niches of desert reptiles and amphibians: Assisted migration and acclimation rescue from extirpation

Recent climate change should result in expansion of species to northern or high elevation range margins, and contraction at southern and low elevation margins in the northern hemisphere, because of local extirpations or range shifts or both. We combined museum occurrence records from both the continental U.S. and Mexico with a new eco-physiological model of extinction developed for...
Authors
Bary Sinervo, Rafael A. Lara Resendiz, Donald B. Miles, Jeffrey E. Lovich, Philip C. Rosen, Hector Gadsden, Gamaliel Castenada Gaytan, Patricia Galina Tessaro, Victor H. Luja, Raymond B. Huey, Amy V. Whipple, Victor Sanchez Cordero, Jason B. Rohr, Gabriel Caetano, Juan C. Santos, Sites, Fausto R. Mendez de la Cruz

Springing forward: Migrating songbirds catch up with the start of spring in North America Springing forward: Migrating songbirds catch up with the start of spring in North America

In temperate regions, the annual pattern of spring onset can be envisioned as a ‘green wave’ of emerging vegetation that moves across continents from low to high latitudes, signifying increasing food availability for consumers.Many herbivorous migrants ‘surf’ such resource waves, timing their movements to exploit peak vegetation resources in early spring. Although less well studied at...
Authors
Claire E. Nemes, Peter P. Marra, Theodore J. Zenzal, Samantha A. Collins, Bryant C. Dossman, Alexander R. Gerson, Camila Gomez, Ana M. Gonzalez, Mariamar Gutierrez Ramirez, Sarah A. Hamer, Joseph Marty, Phillip L. Vasseur, Emily B. Cohen

Environmental surveillance and detection of infectious highly pathogenic avian influenza virus in Iowa wetlands Environmental surveillance and detection of infectious highly pathogenic avian influenza virus in Iowa wetlands

Avian influenza viruses (AIVs) infect both wild birds and domestic poultry, resulting in economically costly outbreaks that have the potential to impact public health. Currently, a knowledge gap exists regarding the detection of infectious AIVs in the aquatic environment. In response to the 2021–2022 Eurasian strain highly pathogenic avian influenza (HPAI) A/goose/Guangdong/1/1996 clade...
Authors
Laura E. Hubbard, Carrie E. Givens, Erin A. Stelzer, Mary L. Killian, Dana W. Kolpin, Christine M. Szablewski, Rebecca L. Poulson

Aquatic carbon export and dynamics in mountain headwater streams of the western U.S. Aquatic carbon export and dynamics in mountain headwater streams of the western U.S.

Mountain headwater streams actively cycle carbon, receiving it from terrestrial landscapes and exporting it through downstream transport and gas exchange with the atmosphere. Although their importance is now widely recognized, aquatic carbon fluxes in headwater streams remain poorly characterized. In this study, aquatic carbon fluxes were measured in 15 mountain headwater streams and...
Authors
David W. Clow, Garrett Alexander Akie, Robert G. Striegl, Colin Penn, Graham A. Sexstone, Gabrielle L. Keith

Two new species of small-eared shrews of the Genus Cryptotis Pomel, 1848, from the Colombian Andes (Mammalia: Eulipotyphla: Soricidae) Two new species of small-eared shrews of the Genus Cryptotis Pomel, 1848, from the Colombian Andes (Mammalia: Eulipotyphla: Soricidae)

Shrews (Mammalia: Eulipotyphla: Soricidae) reach the southern limit of their New World distribution in the Andes and eastern coastal highlands of northern South America. South of Honduras, the family is represented only by species of the genus Cryptotis Pomel, 1848. In South America, soricids are restricted to moist, high-elevation environments above 1000 m, and their distribution...
Authors
Neal Woodman

Marshbird response to herbicide control of cattail in northwestern Minnesota Marshbird response to herbicide control of cattail in northwestern Minnesota

Wetlands provide essential habitat for a wide variety of wildlife species. In the once wetland-rich Prairie Pothole Region and adjacent areas of central North America, many wetlands have been converted to agricultural production. Many remaining wetlands experience ecological change via the invasion and spread of non-native plant species, such as non-native narrowleaf (Typha angustifolia)...
Authors
Nina M. Hill, Douglas H. Johnson, Thomas R. Cooper, Althea A. Archer, David E. Andersen

Assessment of post-wildfire geomorphic change in the North Fork Eagle Creek stream channel, New Mexico, 2017–21 Assessment of post-wildfire geomorphic change in the North Fork Eagle Creek stream channel, New Mexico, 2017–21

The 2012 Little Bear Fire caused substantial vegetation loss in the Eagle Creek Basin of south-central New Mexico. This loss was expected to alter the localized hydrologic response to precipitation by creating conditions that amplify surface runoff, which might alter the geomorphology of North Fork Eagle Creek, a major tributary to Eagle Creek. To monitor short-term geomorphic change...
Authors
Justin R. Nichols, Shaleene B. Chavarria, Alexander P. Graziano

Biological responses of Pacific herring embryos to crude oil are quantifiable at exposure levels below conventional limits of quantitation for PAHs in water and tissues Biological responses of Pacific herring embryos to crude oil are quantifiable at exposure levels below conventional limits of quantitation for PAHs in water and tissues

Pacific herring (Clupea pallasii), a cornerstone of marine food webs, generally spawn on marine macroalgae in shallow nearshore areas that are disproportionately at risk from oil spills. Herring embryos are also highly susceptible to toxicity from chemicals leaching from oil stranded in intertidal and subtidal zones. The water-soluble components of crude oil trigger an adverse outcome...
Authors
John P. Incardona, Tiffany L. Linbo, James R. Cameron, Barbara L. French, Jennie L. Bolton, Jacob L. Gregg, Carey E. Donald, Paul Hershberger, Nathaniel L. Scholz

A global ecological signal of extinction risk in marine ray-finned fishes (class Actinopterygii) A global ecological signal of extinction risk in marine ray-finned fishes (class Actinopterygii)

Many marine fish species are experiencing population declines, but their extinction risk profiles are largely understudied in comparison to their terrestrial vertebrate counterparts. Selective extinction of marine fish species may result in rapid alteration of the structure and function of ocean ecosystems. In this study, we compiled an ecological trait dataset for 8,185 species of...
Authors
Trevor M. Bak, Richard J. Camp, Noel A. Heim, Douglas J. McCauley, Jonathan L. Payne, Matthew L Knope

Assessing the ecological risk of heavy metal sediment contamination from Port Everglades Florida USA Assessing the ecological risk of heavy metal sediment contamination from Port Everglades Florida USA

Port sediments are often contaminated with metals and organic compounds from anthropogenic sources. Remobilization of sediment during a planned expansion of Port Everglades near Fort Lauderdale, Florida (USA) has the potential to harm adjacent benthic communities, including coral reefs. Twelve sediment cores were collected from four Port Everglades sites and a control site; surface...
Authors
Dimitrios G. Giarikos, Laura White, Andre Daniels, Radleigh G. Santos, Paul E. Baldauf, Amy C. Hirons

Data mining reveals tissue-specific expression and host lineage-associated forms of Apis mellifera filamentous virus Data mining reveals tissue-specific expression and host lineage-associated forms of Apis mellifera filamentous virus

Apis mellifera filamentous virus (AmFV) is a large double-stranded DNA virus of uncertain phylogenetic position that infects honey bees (Apis mellifera). Little is known about AmFV evolution or molecular aspects of infection. Accurate annotation of open-reading frames (ORFs) is challenged by weak homology to other known viruses. This study was undertaken to evaluate ORFs (including...
Authors
Robert S. Cornman
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